BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0007.p
         (67 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KK32.1 B3KK32_9BACI Stage III sporulation protein AC                 87   5e-16
B1DM93.1 B1DM93_9BACL Stage III sporulation protein AC                 80   7e-14
Q5WF49.1 Q5WF49_BACSK Stage III sporulation protein AC                 71   4e-11
Q9K955.1 Q9K955_BACHD Mutants block sporulation after engulfment       69   1e-10
C0ZBZ2.1 C0ZBZ2_BREBN Stage III sporulation protein AC                 65   2e-09

>B3KK32.1 B3KK32_9BACI Stage III sporulation protein AC
          Length = 67

 Score = 87.0 bits (214), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query: 1  MNIEVNXXXXXXXXXXXXXXXHTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEI 60
          MNIEVN               HTVLKQMGKED+AHWVT++GF++VLFMV+R+LD LL+EI
Sbjct: 1  MNIEVNAIFQIAGIGIIIAMIHTVLKQMGKEDMAHWVTLIGFVVVLFMVVRLLDDLLKEI 60

Query: 61 KTIFLFQ 67
          K+IFLFQ
Sbjct: 61 KSIFLFQ 67


>B1DM93.1 B1DM93_9BACL Stage III sporulation protein AC
          Length = 67

 Score = 80.1 bits (196), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%)

Query: 1  MNIEVNXXXXXXXXXXXXXXXHTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEI 60
          MN++V+               HTVLKQMGKED+A WVT++GF++VLFMVIR+L+ L QEI
Sbjct: 1  MNMDVSAIFQIAGIGIIIGMIHTVLKQMGKEDMAQWVTLIGFVVVLFMVIRLLNDLFQEI 60

Query: 61 KTIFLFQ 67
          KTIFLFQ
Sbjct: 61 KTIFLFQ 67


>Q5WF49.1 Q5WF49_BACSK Stage III sporulation protein AC
          Length = 68

 Score = 70.9 bits (172), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 41/46 (89%)

Query: 22 HTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEIKTIFLFQ 67
          HTVLKQMGKED AHWVT++GF++VL+MV  ++D L Q+I+++FLFQ
Sbjct: 22 HTVLKQMGKEDWAHWVTLIGFVVVLYMVATIIDDLFQKIRSVFLFQ 67


>Q9K955.1 Q9K955_BACHD Mutants block sporulation after engulfment
          Length = 68

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 44/67 (65%)

Query: 1  MNIEVNXXXXXXXXXXXXXXXHTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEI 60
          M  +VN               HTVLKQMGKED AHWVT++GF++VL+MV  ++D L Q+I
Sbjct: 1  MAYDVNTIFQIAGIGIVVAMIHTVLKQMGKEDWAHWVTLIGFVVVLYMVATIVDDLFQKI 60

Query: 61 KTIFLFQ 67
          + +FLFQ
Sbjct: 61 RGVFLFQ 67


>C0ZBZ2.1 C0ZBZ2_BREBN Stage III sporulation protein AC
          Length = 67

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 35/46 (76%)

Query: 22 HTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEIKTIFLFQ 67
          HTVLKQ GKEDIAHW T+VGFIIVL+MV   +  L  E+K +FLF 
Sbjct: 22 HTVLKQAGKEDIAHWATLVGFIIVLYMVSHYIGDLFSEVKRVFLFN 67


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.335    0.148    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 241,478,687
Number of extensions: 5407335
Number of successful extensions: 40375
Number of sequences better than 1.0e-05: 100
Number of HSP's gapped: 40375
Number of HSP's successfully gapped: 100
Length of query: 67
Length of database: 3,060,696,203
Length adjustment: 39
Effective length of query: 28
Effective length of database: 2,693,276,618
Effective search space: 75411745304
Effective search space used: 75411745304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 125 (52.8 bits)