BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0005.p (329 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KK30.1 B3KK30_9BACI Stage III sporulation protein AA 439 e-121 B1DM95.1 B1DM95_9BACL Stage III sporulation protein AA 319 2e-85 C0ZBZ0.1 C0ZBZ0_BREBN Stage III sporulation protein AA 301 7e-80 A5D343.1 A5D343_PELTS Uncharacterized protein conserved in bacteria 300 1e-79 Q67N96.1 Q67N96_SYMTH Stage III sporulation protein AA 295 6e-78 >B3KK30.1 B3KK30_9BACI Stage III sporulation protein AA Length = 332 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 220/327 (67%), Positives = 259/327 (79%), Gaps = 2/327 (0%) Query: 3 LFPERIRXXXXXXXXXXXDKVEEIRIREGRPLEINYSGGKYHFLGVGGSLTLSPEEAYKP 62 LFPE ++ + VEE+RIRE RPLEIN S GK+HFL G LTL PEEAYKP Sbjct: 8 LFPETVKRMLLNLSKELLEHVEEVRIREERPLEIN-SAGKHHFLDRRGGLTLRPEEAYKP 66 Query: 63 EREDTHRLLDLISNHSLYTMEEELRKGFITIPGGHRIGLAGRTVLSGGGVEHLRDITGFN 122 RED HRLLDLISNHSLYTMEEELRKGFITIPGGHR+GL GRTVLSGG VEH+RDI+GFN Sbjct: 67 TREDAHRLLDLISNHSLYTMEEELRKGFITIPGGHRVGLTGRTVLSGGRVEHIRDISGFN 126 Query: 123 VRIARELPGIADGVLPYLLDKGRQRIMHTLVLSPPQHGKTTLLRDLARQISAGTRGGREG 182 VRIA+E+ G AD +LP+LLD+ R+R+MH+L+LSPPQ GKTTLLRDLARQIS G G Sbjct: 127 VRIAKEIQGAADDILPHLLDRKRKRVMHSLILSPPQQGKTTLLRDLARQISYGKWGNSSV 186 Query: 183 SRPGLKVGIVDERSEIAGSRRGIPAFDVGPRTDILDGCPKAEGLMMMIRSLSPDVLIADE 242 PG+KVGI+DERSEIAG RG+P FDVGPRTD++DGCPKAEG+MMMIRS+SPDVLI DE Sbjct: 187 HWPGMKVGIIDERSEIAGCLRGVPGFDVGPRTDVMDGCPKAEGMMMMIRSMSPDVLIVDE 246 Query: 243 IGRPEDAEAVTEALHAGITVVASAHGKEVSELARRPGLGGLLEHRMFERYVILHRTEAGL 302 IGRPEDAEAV EALHAGI+V+A+AHG V ++ RP L GLLE+RMFE Y +L R Sbjct: 247 IGRPEDAEAVIEALHAGISVIATAHGSSVQDMRGRPALSGLLENRMFEMYAVLSRAGDHR 306 Query: 303 SFRILDGQRRSLLLVAPEGRQGGERHA 329 S+++ DG +R+ L A G+ GG+ +A Sbjct: 307 SYKLYDGGQRT-LQTAISGQPGGDAYA 332 >B1DM95.1 B1DM95_9BACL Stage III sporulation protein AA Length = 350 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/315 (53%), Positives = 215/315 (68%), Gaps = 3/315 (0%) Query: 3 LFPERIRXXXXXXXXXXXDKVEEIRIREGRPLEINYSGGKYHFLGVGGSLTLSPEEAYKP 62 L P ++ + +EEIRIREGRPLE+ G + F G+L + A+KP Sbjct: 8 LLPPELKAVLEKLPESAMEHLEEIRIREGRPLELGIRG-QSRFAASDGTLRAGSDGAFKP 66 Query: 63 EREDTHRLLDLISNHSLYTMEEELRKGFITIPGGHRIGLAGRTVLSGGGVEHLRDITGFN 122 + +LL+ I+NHSLY MEEEL++GFIT+ GGHRIGLAGRT+L GG V +RDI GFN Sbjct: 67 TADTCRKLLEKITNHSLYAMEEELKRGFITVAGGHRIGLAGRTILDGGSVRGIRDIGGFN 126 Query: 123 VRIARELPGIADGVLPYLLDKGRQRIMHTLVLSPPQHGKTTLLRDLARQISAGTRGGREG 182 +RIARE+ G A +LP LLDK R+ + TL+L+PPQ GKTT++RD+AR IS G G E Sbjct: 127 IRIAREVVGSARNLLPKLLDKNRKTVHSTLILAPPQQGKTTIVRDIARSISYGHWGLFEN 186 Query: 183 S--RPGLKVGIVDERSEIAGSRRGIPAFDVGPRTDILDGCPKAEGLMMMIRSLSPDVLIA 240 + G KVGIVDERSEIA RGIP FDVGPRTDI+D CPKAEG+MM++RS+SP+V+IA Sbjct: 187 AAGWAGRKVGIVDERSEIAACVRGIPTFDVGPRTDIMDACPKAEGMMMLLRSMSPEVVIA 246 Query: 241 DEIGRPEDAEAVTEALHAGITVVASAHGKEVSELARRPGLGGLLEHRMFERYVILHRTEA 300 DEIGRPED EA+ EA HAGI+V+A+AH ++ + RP L LLE F V L RT Sbjct: 247 DEIGRPEDGEAIREASHAGISVIATAHAYDLQDAKGRPVLQQLLEDGTFTYVVELKRTAE 306 Query: 301 GLSFRILDGQRRSLL 315 G R++ + + L Sbjct: 307 GFMHRVVAAELKDKL 321 >C0ZBZ0.1 C0ZBZ0_BREBN Stage III sporulation protein AA Length = 320 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 150/315 (47%), Positives = 213/315 (67%), Gaps = 8/315 (2%) Query: 1 MLLFPERIRXXXXXXXXXXXDKVEEIRIREGRPLEINYSGGKYHFLGVGGSLTLSPEEAY 60 + + P +R + +EEIR+R+ +PLE+ + G + ++ G +T P + + Sbjct: 5 LTILPATLRTILTALPIAVRENLEEIRLRQNQPLEVRF-GQQSSYVTSSGQITSIPAQGW 63 Query: 61 KPEREDTHRLLDLISNHSLYTMEEELRKGFITIPGGHRIGLAGRTVLSGGGVEHLRDITG 120 E+ +LL+ +S HSLY +EEEL++G+IT+ GGHRIG+AG+ VL G V+ +RD+T Sbjct: 64 LFSAEEAAKLLNQVSQHSLYALEEELKRGYITVVGGHRIGIAGKVVLDKGEVKGIRDVTS 123 Query: 121 FNVRIARELPGIADGVLPYLLDKGRQRIMHTLVLSPPQHGKTTLLRDLARQISAGTRGGR 180 FN+RIARE G A V+ YL + G+ + +TL++SPPQ GKTTLLRD+AR IS G+ Sbjct: 124 FNIRIAREKKGAAKMVMSYLFEDGK--LQNTLLISPPQCGKTTLLRDIARTISYGSECS- 180 Query: 181 EGSRPGLKVGIVDERSEIAGSRRGIPAFDVGPRTDILDGCPKAEGLMMMIRSLSPDVLIA 240 SR KVGIVDERSE+AG +G+P DVGPRTD+LD CPKA G+MM+IRS+SPDVLI Sbjct: 181 -SSR---KVGIVDERSELAGCLQGVPQRDVGPRTDVLDACPKAVGMMMLIRSMSPDVLIV 236 Query: 241 DEIGRPEDAEAVTEALHAGITVVASAHGKEVSELARRPGLGGLLEHRMFERYVILHRTEA 300 DE+GR ED +AV EA+HAG+ V+ SAHG V E+A RP LG L+ + F RY++L R + Sbjct: 237 DEVGRAEDGDAVWEAIHAGVAVICSAHGASVKEVAERPMLGKLIRYGAFSRYIVLSRAKG 296 Query: 301 GLSFRILDGQRRSLL 315 + + + Q +L+ Sbjct: 297 VGTIQAIYDQSMNLV 311 >A5D343.1 A5D343_PELTS Uncharacterized protein conserved in bacteria Length = 329 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 160/309 (51%), Positives = 206/309 (66%), Gaps = 5/309 (1%) Query: 3 LFPERIRXXXXXXXXXXXDKVEEIRIREGRPLEINYSGGKYHFLGVGGSLTLSPEEAYKP 62 P IR KVEEIR+R+ +PL I+ FL G +T S E+AY+ Sbjct: 15 FLPGSIRALVSLLPVSIQSKVEEIRLRQEKPLAISLPSEDV-FLDPEGRITASAEQAYRV 73 Query: 63 EREDTHRLLDLISNHSLYTMEEELRKGFITIPGGHRIGLAGRTVLSGGGVEHLRDITGFN 122 D RL+ LIS S Y +EEEL+ GFIT+PGGHR G+AG+ VL GG V L+ I+ N Sbjct: 74 TSADMERLIQLISGSSFYALEEELKNGFITLPGGHRAGIAGKAVLDGGRVRALKFISACN 133 Query: 123 VRIARELPGIADGVLPYLLDKGRQRIMHTLVLSPPQHGKTTLLRDLARQISAGTRGGREG 182 +RI RE+ G A VLPY++D+ I HT+++SPP+ GKTT+LRD+ RQIS G Sbjct: 134 IRICREVKGAATKVLPYVIDRHGGSIYHTVLVSPPRCGKTTMLRDMVRQISNGIPAL--- 190 Query: 183 SRPGLKVGIVDERSEIAGSRRGIPAFDVGPRTDILDGCPKAEGLMMMIRSLSPDVLIADE 242 PGL VG+VDERSEIAG RG+P DVG RTD+LDGCPKAEG+MM++RS+SP V+ ADE Sbjct: 191 GFPGLTVGLVDERSEIAGCYRGVPKLDVGIRTDVLDGCPKAEGMMMLLRSMSPRVIAADE 250 Query: 243 IGRPEDAEAVTEALHAGITVVASAHGKEVSELARRPGLGGLLEHRMFERYVILHRTE-AG 301 IGR ED +A+ E L+AG+ V+ +AHG ++ELA RP LG +L +M ERYVIL RT AG Sbjct: 251 IGRQEDVDALEEVLNAGVKVLITAHGSSLAELAERPALGEVLRSKMIERYVILGRTRGAG 310 Query: 302 LSFRILDGQ 310 I+DG+ Sbjct: 311 TVEDIIDGK 319 >Q67N96.1 Q67N96_SYMTH Stage III sporulation protein AA Length = 292 Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 157/275 (57%), Positives = 196/275 (71%), Gaps = 6/275 (2%) Query: 24 EEIRIREGRPLEINYSGGKYHFLGVGGSLTLSPEEAYKPEREDTHRLLDLISNHSLYTME 83 EEIRIR+GRPL + Y GG F+ G LT P A +P+ +D R L++ S+Y E Sbjct: 6 EEIRIRQGRPLHLVYPGGDA-FVTPDGRLTADPARAVRPDGDDLQRTFQLMAKGSVYAWE 64 Query: 84 EELRKGFITIPGGHRIGLAGRTVLSGGGVEHLRDITGFNVRIARELPGIADGVLPYLLDK 143 EE+R GF+T+ GGHR+GL GR V + L+ + NVRIARE+PG ADG+LP+L+ Sbjct: 65 EEVRGGFLTLEGGHRVGLCGRAVTEACRIRTLKQVASLNVRIAREVPGAADGLLPHLVRG 124 Query: 144 GRQRIMHTLVLSPPQHGKTTLLRDLARQISAGTRGGREGSRPGLKVGIVDERSEIAGSRR 203 GR + TL++SPPQ GKTTLLRDL RQ+S G R G R GLKVG+VDERSE+AG Sbjct: 125 GR--FLSTLLVSPPQAGKTTLLRDLVRQLSTGVP--RLGLR-GLKVGLVDERSEVAGCVC 179 Query: 204 GIPAFDVGPRTDILDGCPKAEGLMMMIRSLSPDVLIADEIGRPEDAEAVTEALHAGITVV 263 G+P DVGPRTD+LDGCPKAEGLM+MIR+LSP V+ ADEIGRPEDA AV EALHAG+ V+ Sbjct: 180 GVPQRDVGPRTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVL 239 Query: 264 ASAHGKEVSELARRPGLGGLLEHRMFERYVILHRT 298 A+AHG +S++ RRP L LL FER V+L R+ Sbjct: 240 ATAHGAGLSDVRRRPALAELLRAGAFERAVVLGRS 274 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.142 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,009,010,407 Number of extensions: 89146286 Number of successful extensions: 241925 Number of sequences better than 1.0e-05: 320 Number of HSP's gapped: 241321 Number of HSP's successfully gapped: 320 Length of query: 329 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 193 Effective length of database: 1,779,438,163 Effective search space: 343431565459 Effective search space used: 343431565459 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)