BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0135.0011.p (244 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DCR1.1 B1DCR1_9BACL Methyltransferase type 11 328 2e-88 C0Z8Z6.1 C0Z8Z6_BREBN Putative uncharacterized protein 328 3e-88 A3I9N0.1 A3I9N0_9BACI S-adenosylmethionine (SAM)-dependent methy... 311 5e-83 Q8ERQ0.1 Q8ERQ0_OCEIH Hypothetical conserved protein 305 3e-81 Q5WDQ6.1 Q5WDQ6_BACSK S-adenosylmethionine (SAM)-dependent methy... 296 1e-78 >B1DCR1.1 B1DCR1_9BACL Methyltransferase type 11 Length = 243 Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 152/243 (62%), Positives = 186/243 (76%) Query: 1 MKQNKYDEAGFFAKYSAMPRSTGGLEAAGEWSTFRSLLPDLHGTRVLDLGCGFGWHCRYA 60 MKQNKYD+ FF KYS M RS GGLEAAGEW R+LLPDL RVLDLGCG+GWHCRYA Sbjct: 1 MKQNKYDDPDFFDKYSQMARSIGGLEAAGEWHVLRTLLPDLKDKRVLDLGCGYGWHCRYA 60 Query: 61 REQQAESVVGIDLSENMLERARAMTDDPGIEYRRGAIEDIRFAAGEFDVVISSLAIHYVE 120 REQ A SV+GID+SE M+ RA++ D I YR+ AIEDI F GEFD VISSLA+HYVE Sbjct: 61 REQGARSVLGIDISEKMIARAKSFNADAAITYRQAAIEDISFEPGEFDAVISSLALHYVE 120 Query: 121 RFDLLCCEVQHCLRTGGSFVLSVEHPIYTALAAQDWHYGPDGAKLHWPLDHYHDEGPREA 180 F+ C ++ L GGSFVLS+EHP++TA+AAQDWHYGP G +LHWP+DHY DEG R A Sbjct: 121 DFEGACRKIYDSLAPGGSFVLSMEHPVFTAVAAQDWHYGPSGERLHWPVDHYQDEGSRIA 180 Query: 181 RFLEDDVIKYHRNIATYLNTLITSGFTVTKLSELQPTPEMLEQNAAWHEELRRPMFLLLS 240 RFL+ DVIKYHR +++ +N LI +GF +T+++E P+ E L+Q A +E RRPMFLLL+ Sbjct: 181 RFLDSDVIKYHRTLSSIMNALIQAGFRMTEVAEPGPSQEALDQYAEMKDETRRPMFLLLA 240 Query: 241 AVR 243 A + Sbjct: 241 AQK 243 >C0Z8Z6.1 C0Z8Z6_BREBN Putative uncharacterized protein Length = 246 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 154/243 (63%), Positives = 182/243 (74%), Gaps = 1/243 (0%) Query: 1 MKQNKYDEAGFFAKYSAMPRSTGGLEAAGEWSTFRSLLPDLHGTRVLDLGCGFGWHCRYA 60 MKQNKYDE FF YS M RS GL AAGEW FR LLP L +VLDLGCGFGWHCRYA Sbjct: 1 MKQNKYDEPSFFTTYSQMARSVEGLNAAGEWHAFRELLPSLREKKVLDLGCGFGWHCRYA 60 Query: 61 REQQAESVVGIDLSENMLERARAMTDDPGIEYRRGAIEDIRFAAGEFDVVISSLAIHYVE 120 REQQA SVVG+DLSE ML RA+ T DP IEY R IEDI F EFDVVISSLAIHYVE Sbjct: 61 REQQARSVVGVDLSEKMLARAKETTTDPAIEYLRLPIEDIDFTPEEFDVVISSLAIHYVE 120 Query: 121 RFDLLCCEVQHCLRTGGSFVLSVEHPIYTALAAQDWHYGPDGAKLHWPLDHYHDEGPREA 180 RFDLLC + HCL GGSFV SVEHP++TALA QDWHYGP G +LHWP+D+Y EG R+ Sbjct: 121 RFDLLCQRIYHCLAPGGSFVFSVEHPVFTALAGQDWHYGPGGERLHWPVDNYQQEGIRQT 180 Query: 181 RFLEDDVIKYHRNIATYLNTLITSGFTVTKLSELQPTPEMLEQNAAWHEELRRPMFLLLS 240 FL+ +V+KYHR ++Y+N L+ +GF +TK++E P EML+ +E+RRP+FLL++ Sbjct: 181 NFLDHEVVKYHRTFSSYMNDLLAAGFYLTKVAEPGPPEEMLD-IPGMRDEIRRPIFLLIA 239 Query: 241 AVR 243 A + Sbjct: 240 ASK 242 >A3I9N0.1 A3I9N0_9BACI S-adenosylmethionine (SAM)-dependent methyltransferase Length = 244 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 139/244 (56%), Positives = 179/244 (73%) Query: 1 MKQNKYDEAGFFAKYSAMPRSTGGLEAAGEWSTFRSLLPDLHGTRVLDLGCGFGWHCRYA 60 MKQNKYD+ FF+ Y MPRS GL+AAGEW ++LLPDL VLDLGCGFGWHCRYA Sbjct: 1 MKQNKYDDMQFFSAYEKMPRSVQGLDAAGEWHVLKTLLPDLKNKHVLDLGCGFGWHCRYA 60 Query: 61 REQQAESVVGIDLSENMLERARAMTDDPGIEYRRGAIEDIRFAAGEFDVVISSLAIHYVE 120 R QQA+SV+G+D+SE MLE+A+ TDDP I Y + IEDI+F+A +FDVV+SSLAIHY++ Sbjct: 61 RAQQAKSVIGVDISEKMLEKAQEKTDDPFISYLQIPIEDIQFSASQFDVVLSSLAIHYLQ 120 Query: 121 RFDLLCCEVQHCLRTGGSFVLSVEHPIYTALAAQDWHYGPDGAKLHWPLDHYHDEGPREA 180 F+ LC +V L+ GGSFV SVEHPI+T+ QDW+ G +LHWP+DHY EG RE Sbjct: 121 NFEALCKKVYTYLKPGGSFVFSVEHPIFTSRHEQDWYNDEQGNRLHWPVDHYQTEGMRET 180 Query: 181 RFLEDDVIKYHRNIATYLNTLITSGFTVTKLSELQPTPEMLEQNAAWHEELRRPMFLLLS 240 FL ++VIKYHR ++TY+N LI GFT+ + E P+ EM++ +ELRRPMFL++ Sbjct: 181 TFLTENVIKYHRTLSTYMNDLIQVGFTIRAVKEPMPSEEMIQTTPGMQDELRRPMFLMIV 240 Query: 241 AVRN 244 A + Sbjct: 241 AEKK 244 >Q8ERQ0.1 Q8ERQ0_OCEIH Hypothetical conserved protein Length = 243 Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 138/243 (56%), Positives = 171/243 (70%) Query: 1 MKQNKYDEAGFFAKYSAMPRSTGGLEAAGEWSTFRSLLPDLHGTRVLDLGCGFGWHCRYA 60 MKQNKYD FF+KY MPRS GL AGEW R LLPD VLDLGCGFGWHCRYA Sbjct: 1 MKQNKYDNQNFFSKYEQMPRSVKGLGGAGEWHILRDLLPDFKHKNVLDLGCGFGWHCRYA 60 Query: 61 REQQAESVVGIDLSENMLERARAMTDDPGIEYRRGAIEDIRFAAGEFDVVISSLAIHYVE 120 REQQA SV+G+D+SENM+ +A +T DP I Y + IED F+ +FDVVISSLA HY+E Sbjct: 61 REQQASSVIGVDISENMIRKACEITSDPLISYVKAPIEDFAFSESQFDVVISSLAFHYIE 120 Query: 121 RFDLLCCEVQHCLRTGGSFVLSVEHPIYTALAAQDWHYGPDGAKLHWPLDHYHDEGPREA 180 F +C ++ + LR GGSFV SVEHPI+TA QDW+Y G +LHWP+DHY EG R+A Sbjct: 121 SFKSICEKIYNSLRFGGSFVFSVEHPIFTARREQDWYYDEQGNRLHWPVDHYQKEGVRKA 180 Query: 181 RFLEDDVIKYHRNIATYLNTLITSGFTVTKLSELQPTPEMLEQNAAWHEELRRPMFLLLS 240 FL + VIKYHR I+TY+N LI +GF + + E P+ ML+ + +E RRPMFL++S Sbjct: 181 LFLNEKVIKYHRTISTYMNDLIDAGFIIKTVKESFPSDVMLKNDPKMEDENRRPMFLMIS 240 Query: 241 AVR 243 A + Sbjct: 241 ASK 243 >Q5WDQ6.1 Q5WDQ6_BACSK S-adenosylmethionine (SAM)-dependent methyltransferase Length = 244 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 137/243 (56%), Positives = 168/243 (69%) Query: 1 MKQNKYDEAGFFAKYSAMPRSTGGLEAAGEWSTFRSLLPDLHGTRVLDLGCGFGWHCRYA 60 MKQNKYD+ FFA Y MPRS GL AGEW ++LLPD+ G VLDLGCGFGWHCRYA Sbjct: 1 MKQNKYDDKAFFAAYEKMPRSVKGLAGAGEWHVLKALLPDMRGKAVLDLGCGFGWHCRYA 60 Query: 61 REQQAESVVGIDLSENMLERARAMTDDPGIEYRRGAIEDIRFAAGEFDVVISSLAIHYVE 120 REQQA SVVG+DLSE MLE+AR T+DP I Y AIEDI F +FDVVISSLA HY++ Sbjct: 61 REQQARSVVGVDLSEKMLEKAREKTNDPFISYLNMAIEDIDFPRAQFDVVISSLAFHYIK 120 Query: 121 RFDLLCCEVQHCLRTGGSFVLSVEHPIYTALAAQDWHYGPDGAKLHWPLDHYHDEGPREA 180 F +C V CL+ G+ V SVEHPI+T+ QDW Y G + HWP+DHY EG RE Sbjct: 121 SFRPICKNVYDCLKAEGTVVFSVEHPIFTSRHQQDWCYDDQGNRQHWPVDHYQSEGRRET 180 Query: 181 RFLEDDVIKYHRNIATYLNTLITSGFTVTKLSELQPTPEMLEQNAAWHEELRRPMFLLLS 240 FL + VIKYHR ++TY+N LI +GF + + E P+ +M + +E RRPMFL++S Sbjct: 181 SFLAEHVIKYHRTLSTYINELIEAGFRINAVKEPTPSEDMSALSQEMKDEWRRPMFLIIS 240 Query: 241 AVR 243 A + Sbjct: 241 AQK 243 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,526,242,036 Number of extensions: 63049614 Number of successful extensions: 148928 Number of sequences better than 1.0e-05: 1007 Number of HSP's gapped: 150271 Number of HSP's successfully gapped: 1008 Length of query: 244 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 112 Effective length of database: 1,817,122,223 Effective search space: 203517688976 Effective search space used: 203517688976 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)