BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0128.0016.p (343 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1BP59.1 B1BP59_CLOPE Glycosyl transferase, group 2 family prote... 138 7e-31 B1RQM3.1 B1RQM3_CLOPE Glycosyl transferase, group 2 family prote... 138 8e-31 B1BL20.1 B1BL20_CLOPE Glycosyl transferase, group 2 family prote... 136 2e-30 Q0TT73.1 Q0TT73_CLOP1 Glycosyl transferase, group 2 family prote... 136 3e-30 B1RI22.1 B1RI22_CLOPE Glycosyl transferase, group 2 family prote... 136 3e-30 >B1BP59.1 B1BP59_CLOPE Glycosyl transferase, group 2 family protein EC=2.4.1.- Length = 334 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 6/236 (2%) Query: 2 YNLEHYVEPLLNSLLNQSEKRFELILVDDGSRDRTAQVAEEMLARHPILQAKLIRTA-NG 60 YN E Y+E L L Q+ FE+I+VDDGS D T +V+E L I ++IR N Sbjct: 16 YNSEKYIEKNLMFLSRQTSNNFEVIVVDDGSTDNTCEVSEACLENFKI-NHRVIRCEENR 74 Query: 61 GVSAARNTGLAAASGDYVLFLDGDDYADSSLVQRVASSTAGGRTDILCWGYNLVREDGST 120 G S ARN G+ + G Y+LFLD DD+A+++LVQ + DI+ + Y ++ED S Sbjct: 75 GQSVARNIGINYSRGKYILFLDSDDFAENNLVQ-ILERNMFNEPDIVFFDYKRIKEDDSV 133 Query: 121 IVSFTS--ASSDTTGSEALKNIFVHKTLRIWTGSIAFKRTFLLENGISYTERCVNGEDQE 178 V+ E + N + +R+WTGS+ + + FL +N + + E ED Sbjct: 134 NVNIAQNFEFGKIKSGEEVFNAYKDNKIRLWTGSLVYNKEFLNKNKLRFLEGAHGAEDLN 193 Query: 179 FIYKALARASRVISIPDVLSYYLQRTSSITGTYNVHK-FDVVAAFKRVAEYFSAHP 233 FI+KAL + +V I D L +Y QR S+T N++K VV + + VA++ + Sbjct: 194 FIFKALLSSKKVRGIEDSLVFYCQRGDSLTNNPNIYKNITVVESMEDVAKFIDENK 249 >B1RQM3.1 B1RQM3_CLOPE Glycosyl transferase, group 2 family protein EC=2.4.1.- Length = 334 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 6/236 (2%) Query: 2 YNLEHYVEPLLNSLLNQSEKRFELILVDDGSRDRTAQVAEEMLARHPILQAKLIRTA-NG 60 YN E Y+E L L Q+ FE+I+VDDGS D T +V+E L I ++IR N Sbjct: 16 YNSEKYIEKNLMFLSRQTSNNFEVIVVDDGSTDNTCEVSEACLENFKI-NHRVIRCEENR 74 Query: 61 GVSAARNTGLAAASGDYVLFLDGDDYADSSLVQRVASSTAGGRTDILCWGYNLVREDGST 120 G S ARN G+ + G Y+LFLD DD+A+++LVQ + DI+ + Y ++ED S Sbjct: 75 GQSVARNIGINYSRGKYILFLDSDDFAENNLVQ-ILERNMFNEPDIVFFDYKRIKEDDSV 133 Query: 121 IVSFTS--ASSDTTGSEALKNIFVHKTLRIWTGSIAFKRTFLLENGISYTERCVNGEDQE 178 V+ E + N + +R+WTGS+ + + FL +N + + E ED Sbjct: 134 NVNIAQNFEFGKIKSGEEVFNAYKDNKIRLWTGSLVYNKEFLNKNKLRFLEGAHGAEDLN 193 Query: 179 FIYKALARASRVISIPDVLSYYLQRTSSITGTYNVHK-FDVVAAFKRVAEYFSAHP 233 FI+KAL + +V I D L +Y QR S+T N++K VV + + VA++ + Sbjct: 194 FIFKALLSSKKVRGIEDSLVFYCQRGDSLTNNPNIYKNITVVESMEDVAKFIDENK 249 >B1BL20.1 B1BL20_CLOPE Glycosyl transferase, group 2 family protein EC=2.4.1.- Length = 334 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 6/236 (2%) Query: 2 YNLEHYVEPLLNSLLNQSEKRFELILVDDGSRDRTAQVAEEMLARHPILQAKLIRTA-NG 60 YN E Y+E L L Q+ FE+I+VDDGS D T +V+E L I ++IR N Sbjct: 16 YNSEKYIEKNLMFLSRQTSNNFEVIVVDDGSTDNTCEVSEACLENFKI-NHRVIRCEENR 74 Query: 61 GVSAARNTGLAAASGDYVLFLDGDDYADSSLVQRVASSTAGGRTDILCWGYNLVREDGST 120 G S ARN G+ + G Y+LFLD DD+A+++LVQ + DI+ + Y ++ED S Sbjct: 75 GQSVARNIGINYSRGKYILFLDSDDFAENNLVQ-ILERNMFNEPDIVFFDYKRIKEDDSV 133 Query: 121 IVSFTS--ASSDTTGSEALKNIFVHKTLRIWTGSIAFKRTFLLENGISYTERCVNGEDQE 178 V+ E + N + +R+WTGS+ + + FL +N + + E ED Sbjct: 134 NVNIAQNFEFGKIKSGEEVFNAYKDNKIRLWTGSLVYNKEFLNKNKLRFLEGAHGAEDLN 193 Query: 179 FIYKALARASRVISIPDVLSYYLQRTSSITGTYNVHK-FDVVAAFKRVAEYFSAHP 233 FI+KAL + +V I D L +Y QR S+T +++K VV + + VA++ + Sbjct: 194 FIFKALLSSKKVRGIEDSLVFYCQRGDSLTNNPDIYKNITVVESMEDVAKFIDENK 249 >Q0TT73.1 Q0TT73_CLOP1 Glycosyl transferase, group 2 family protein EC=2.4.1.- Length = 334 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 6/236 (2%) Query: 2 YNLEHYVEPLLNSLLNQSEKRFELILVDDGSRDRTAQVAEEMLARHPILQAKLIRTA-NG 60 YN E Y+E L L Q+ FE+I+VDDGS D T +V+E L I ++IR N Sbjct: 16 YNSEKYIEKNLMFLSRQTSNNFEVIVVDDGSTDNTCEVSEACLENFKI-NHRVIRCEENR 74 Query: 61 GVSAARNTGLAAASGDYVLFLDGDDYADSSLVQRVASSTAGGRTDILCWGYNLVREDGST 120 G S ARN G+ + G Y+LFLD DD+A+++LVQ + DI+ + Y ++ED S Sbjct: 75 GQSVARNIGINYSRGKYILFLDSDDFAENNLVQ-ILERNMFNEPDIVFFDYKRIKEDDSV 133 Query: 121 IVSFTS--ASSDTTGSEALKNIFVHKTLRIWTGSIAFKRTFLLENGISYTERCVNGEDQE 178 V+ E + N + +R+WTGS+ + + FL +N + + E ED Sbjct: 134 NVNIAQNFEFGKIKSGEEVFNAYKDNKIRLWTGSLVYNKEFLNKNKLRFLEGAHGAEDLN 193 Query: 179 FIYKALARASRVISIPDVLSYYLQRTSSITGTYNVHK-FDVVAAFKRVAEYFSAHP 233 FI+KAL + +V I D L +Y QR S+T +++K VV + + VA++ + Sbjct: 194 FIFKALLSSKKVRGIEDSLVFYCQRGDSLTNNPDIYKNITVVESMEDVAKFIDENK 249 >B1RI22.1 B1RI22_CLOPE Glycosyl transferase, group 2 family protein EC=2.4.1.- Length = 334 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 6/236 (2%) Query: 2 YNLEHYVEPLLNSLLNQSEKRFELILVDDGSRDRTAQVAEEMLARHPILQAKLIRTA-NG 60 YN E Y+E L L Q+ FE+I+VDDGS D T +V+E L I ++IR N Sbjct: 16 YNSEKYIEKNLMFLSRQTSNNFEVIVVDDGSTDNTCEVSEACLENFKI-NHRVIRCEENR 74 Query: 61 GVSAARNTGLAAASGDYVLFLDGDDYADSSLVQRVASSTAGGRTDILCWGYNLVREDGST 120 G S ARN G+ + G Y+LFLD DD+A+++LVQ + DI+ + Y ++ED S Sbjct: 75 GQSVARNIGINYSRGKYILFLDSDDFAENNLVQ-ILERNMFNEPDIVFFDYKRIKEDDSV 133 Query: 121 IVSFTS--ASSDTTGSEALKNIFVHKTLRIWTGSIAFKRTFLLENGISYTERCVNGEDQE 178 V+ E + N + +R+WTGS+ + + FL +N + + E ED Sbjct: 134 NVNIAQNFEFGKIKSGEEVFNAYKDNKIRLWTGSLVYNKEFLNKNKLRFLEGAHGAEDLN 193 Query: 179 FIYKALARASRVISIPDVLSYYLQRTSSITGTYNVHK-FDVVAAFKRVAEYFSAHP 233 FI+KAL + +V I D L +Y QR S+T +++K VV + + VA++ + Sbjct: 194 FIFKALLSSKKVRGIEDSLVFYCQRGDSLTNNPDIYKNITVVESMEDVAKFIDENK 249 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,895,734,263 Number of extensions: 73384375 Number of successful extensions: 225556 Number of sequences better than 1.0e-05: 2794 Number of HSP's gapped: 226218 Number of HSP's successfully gapped: 2805 Length of query: 343 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 207 Effective length of database: 1,779,438,163 Effective search space: 368343699741 Effective search space used: 368343699741 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)