BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0128.0012.p (926 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9M1H2.1 B9M1H2_GEOSF Cytochrome C family protein 228 3e-57 A6M2K3.1 A6M2K3_CLOB8 Putative cell wall binding repeat-containi... 125 3e-26 B4CUS7.1 B4CUS7_9BACT Conserved repeat domain protein 118 3e-24 C4ILH7.1 C4ILH7_CLOBU Putative cell wall binding repeat-containi... 115 2e-23 B1QUG8.1 B1QUG8_CLOBU Putative collagenolytic protease 115 2e-23 >B9M1H2.1 B9M1H2_GEOSF Cytochrome C family protein Length = 2104 Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 204/548 (37%), Positives = 275/548 (50%), Gaps = 18/548 (3%) Query: 24 VNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDGVTKKSYSLFILRAPSDVADXXXXXXXX 83 VNGV SGT +LA +N + VTAQDGVTKK+Y++ + RAPS A+ Sbjct: 637 VNGVPVESGTASGPISLAVESNTVTVVVTAQDGVTKKTYTVVVTRAPSTNANLSNLTLST 696 Query: 84 XXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLSVDGNVHIDDTAYTK-NLNVGM 142 P F + Y+ V N +SL +TP D A + V+G A L VG Sbjct: 697 GTLTPAFASGTISYTASVTNSTTSLTVTPTAQDTTATIKVNGITVASGVASAAIPLAVGS 756 Query: 143 NTVKIVVVSQSGVREKTTLVNIIRKASSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQ 202 NT+ VV +Q G T V + R S+NA+LSSL LS+G L PA+ T Y +V N Sbjct: 757 NTINTVVTAQDGSTTTTYTVVVTRAPSTNANLSSLTLSNGTLIPAFASGTTYYTASVTNG 816 Query: 203 VSELAVTPTPEDVHATVSLNGNVTPNAQPRW-VDLQVGVNEFNVLVQAEDGVTAKNYVLT 261 + + VTPT +D ATV++NG + P + L VG N N +V A+DG T K Y + Sbjct: 817 TTSVTVTPTVQDSTATVTINGVSVASGTPSGAIPLSVGSNTINTVVTAQDGSTTKTYTVV 876 Query: 262 IVRKASSDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQATYTING 321 + R S++A+L N+ LS L+ F T++Y V+N ++ VT T D AT T+NG Sbjct: 877 VTRAPSTNANLSNLALSAGTLTPAFASGTTSYAASVSNATSTITVTPTVQDATATITVNG 936 Query: 322 VQSAGG---VPVPLAVGENVVTIAVTAADKVTTKEYTVTIVRAASSNANLLELTMTDLSD 378 V G VP L VG N + VTA D TTK YTV + RAAS+NANL LS Sbjct: 937 VAVTSGTASVPFALVVGANTLNTVVTAQDGATTKIYTVMVTRAASTNANLNNFA---LSS 993 Query: 379 NAISLTPVMGTLSYNGTVEDSVSAAKLKAVVDDANASTSVSVNGVWIEDLNA-VP--LTT 435 +S GT SY +V ++ S + D+ A ++ VNGV + A VP L Sbjct: 994 GTLSPAFASGTTSYTASVSNATSTITVTPTAQDSTA--TIKVNGVAVTSGTASVPFALVV 1051 Query: 436 GLNVIEVNVTAQDG-SMKVYTINLVRNPSTDAALLEMRITPGELTPGFQPGIXXXXXXXX 494 G N + VTAQDG + K YT+ + R PST+ L + ++ G L+P F G Sbjct: 1052 GANTLNTVVTAQDGTTTKTYTVVVTRAPSTNTNLSNLVLSAGTLSPSFASGTTSYTASVT 1111 Query: 495 XXXXXXXXXIVTNHEAATYVLKKNGAS--TGVTGNTVALDEGTNQITVQVTAADASTQMT 552 AT +K NGA+ +G + L G+N I QVTA D +T T Sbjct: 1112 NATSSITVTPTVQDTTAT--IKVNGATVASGSASGAITLTVGSNTIDTQVTAQDGTTIKT 1169 Query: 553 YTVTVNRA 560 YTV V RA Sbjct: 1170 YTVVVTRA 1177 Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 218/607 (35%), Positives = 301/607 (49%), Gaps = 32/607 (5%) Query: 168 ASSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNG-NVT 226 +S+NA+LS+L LS G L PA+ + T Y +V N V+ + VTPT ED AT ++NG V Sbjct: 584 SSTNANLSNLALSSGTLTPAFASSTTSYTASVANTVTSITVTPTEEDTTATTTVNGVPVE 643 Query: 227 PNAQPRWVDLQVGVNEFNVLVQAEDGVTAKNYVLTIVRKASSDADLINITLSGKPLSGGF 286 + L V N V+V A+DGVT K Y + + R S++A+L N+TLS L+ F Sbjct: 644 SGTASGPISLAVESNTVTVVVTAQDGVTKKTYTVVVTRAPSTNANLSNLTLSTGTLTPAF 703 Query: 287 DRTTSTYFEYVANNIDSMAVTATTSDEQATYTINGVQSAGGV---PVPLAVGENVVTIAV 343 T +Y V N+ S+ VT T D AT +NG+ A GV +PLAVG N + V Sbjct: 704 ASGTISYTASVTNSTTSLTVTPTAQDTTATIKVNGITVASGVASAAIPLAVGSNTINTVV 763 Query: 344 TAADKVTTKEYTVTIVRAASSNANLLELTMTDLSDNAISLTPVM--GTLSYNGTVEDSVS 401 TA D TT YTV + RA S+NANL LT+++ +L P GT Y +V + + Sbjct: 764 TAQDGSTTTTYTVVVTRAPSTNANLSSLTLSNG-----TLIPAFASGTTYYTASVTNGTT 818 Query: 402 AAKLKAVVDDANASTSVSVNGVWIED---LNAVPLTTGLNVIEVNVTAQDGS-MKVYTIN 457 + + V D+ A +V++NGV + A+PL+ G N I VTAQDGS K YT+ Sbjct: 819 SVTVTPTVQDSTA--TVTINGVSVASGTPSGAIPLSVGSNTINTVVTAQDGSTTKTYTVV 876 Query: 458 LVRNPSTDAALLEMRITPGELTPGFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKK 517 + R PST+A L + ++ G LTP F G AT + Sbjct: 877 VTRAPSTNANLSNLALSAGTLTPAFASGTTSYAASVSNATSTITVTPTVQDATATITVNG 936 Query: 518 NGASTGVTGNTVALDEGTNQITVQVTAADASTQMTYTVTVNRAILPKXXXXXXXXXXXXX 577 ++G AL G N + VTA D +T YTV V RA Sbjct: 937 VAVTSGTASVPFALVVGANTLNTVVTAQDGATTKIYTVMVTRA---ASTNANLNNFALSS 993 Query: 578 GTEILNPEFSAEIFKYSLSVPYEVSQVELDALKGDINARLTVNGVTVDN---PMLVKLAE 634 GT L+P F++ Y+ SV S + + D A + VNGV V + + L Sbjct: 994 GT--LSPAFASGTTSYTASVSNATSTITVTPTAQDSTATIKVNGVAVTSGTASVPFALVV 1051 Query: 635 GLNTVNLKVTAQDGKTESVYEVEITRKSRSSNADLNNISVIAGALDPAFDPAVSEYTVEV 694 G NT+N VTAQDG T Y V +TR + S+N +L+N+ + AG L P+F + YT V Sbjct: 1052 GANTLNTVVTAQDGTTTKTYTVVVTR-APSTNTNLSNLVLSAGTLSPSFASGTTSYTASV 1110 Query: 695 ENDVDSIALNPVVADTKA-----GSQIIGRDGASLNHLVEGDNVFDILVTAEDG-TVKIY 748 N SI + P V DT A G+ + + L G N D VTA+DG T+K Y Sbjct: 1111 TNATSSITVTPTVQDTTATIKVNGATVASGSASGAITLTVGSNTIDTQVTAQDGTTIKTY 1170 Query: 749 TVKVIKA 755 TV V +A Sbjct: 1171 TVVVTRA 1177 Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 212/590 (35%), Positives = 294/590 (49%), Gaps = 32/590 (5%) Query: 88 PVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLSVDGNVHIDDTAYTK--NLNVGMNTV 145 P F + T Y+ V N V+S+ +TP D A +V+G V ++ + +L V NTV Sbjct: 602 PAFASSTTSYTASVANTVTSITVTPTEEDTTATTTVNG-VPVESGTASGPISLAVESNTV 660 Query: 146 KIVVVSQSGVREKTTLVNIIRKASSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSE 205 +VV +Q GV +KT V + R S+NA+LS+L LS G L PA+ Y +V N + Sbjct: 661 TVVVTAQDGVTKKTYTVVVTRAPSTNANLSNLTLSTGTLTPAFASGTISYTASVTNSTTS 720 Query: 206 LAVTPTPEDVHATVSLNG-NVTPNAQPRWVDLQVGVNEFNVLVQAEDGVTAKNYVLTIVR 264 L VTPT +D AT+ +NG V + L VG N N +V A+DG T Y + + R Sbjct: 721 LTVTPTAQDTTATIKVNGITVASGVASAAIPLAVGSNTINTVVTAQDGSTTTTYTVVVTR 780 Query: 265 KASSDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQATYTINGVQS 324 S++A+L ++TLS L F T+ Y V N S+ VT T D AT TINGV Sbjct: 781 APSTNANLSSLTLSNGTLIPAFASGTTYYTASVTNGTTSVTVTPTVQDSTATVTINGVSV 840 Query: 325 AGGVP---VPLAVGENVVTIAVTAADKVTTKEYTVTIVRAASSNANLLELTMTDLSDNAI 381 A G P +PL+VG N + VTA D TTK YTV + RA S+NANL L ++ A Sbjct: 841 ASGTPSGAIPLSVGSNTINTVVTAQDGSTTKTYTVVVTRAPSTNANLSNLALS-----AG 895 Query: 382 SLTPVM--GTLSYNGTVEDSVSAAKLKAVVDDANASTSVSVNGVWIEDLNA-VP--LTTG 436 +LTP GT SY +V ++ S + V DA A +++VNGV + A VP L G Sbjct: 896 TLTPAFASGTTSYAASVSNATSTITVTPTVQDATA--TITVNGVAVTSGTASVPFALVVG 953 Query: 437 LNVIEVNVTAQDG-SMKVYTINLVRNPSTDAALLEMRITPGELTPGFQPGIXXXXXXXXX 495 N + VTAQDG + K+YT+ + R ST+A L ++ G L+P F G Sbjct: 954 ANTLNTVVTAQDGATTKIYTVMVTRAASTNANLNNFALSSGTLSPAFASG--TTSYTASV 1011 Query: 496 XXXXXXXXIVTNHEAATYVLKKNG--ASTGVTGNTVALDEGTNQITVQVTAADASTQMTY 553 + + +T +K NG ++G AL G N + VTA D +T TY Sbjct: 1012 SNATSTITVTPTAQDSTATIKVNGVAVTSGTASVPFALVVGANTLNTVVTAQDGTTTKTY 1071 Query: 554 TVTVNRAILPKXXXXXXXXXXXXXGTEILNPEFSAEIFKYSLSVPYEVSQVELDALKGDI 613 TV V RA GT L+P F++ Y+ SV S + + D Sbjct: 1072 TVVVTRA---PSTNTNLSNLVLSAGT--LSPSFASGTTSYTASVTNATSSITVTPTVQDT 1126 Query: 614 NARLTVNGVTVDN---PMLVKLAEGLNTVNLKVTAQDGKTESVYEVEITR 660 A + VNG TV + + L G NT++ +VTAQDG T Y V +TR Sbjct: 1127 TATIKVNGATVASGSASGAITLTVGSNTIDTQVTAQDGTTIKTYTVVVTR 1176 Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 184/493 (37%), Positives = 259/493 (52%), Gaps = 20/493 (4%) Query: 2 AVANAVTAAEFTPTAAEG-ASIKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDGVTKK 60 +V N+ T+ TPTA + A+IKVNG+ SG LA G+N VTAQDG T Sbjct: 713 SVTNSTTSLTVTPTAQDTTATIKVNGITVASGVASAAIPLAVGSNTINTVVTAQDGSTTT 772 Query: 61 SYSLFILRAPSDVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAG 120 +Y++ + RAPS A+ P F + T Y+ V N +S+ +TP + D+ A Sbjct: 773 TYTVVVTRAPSTNANLSSLTLSNGTLIPAFASGTTYYTASVTNGTTSVTVTPTVQDSTAT 832 Query: 121 LSVDG-NVHIDDTAYTKNLNVGMNTVKIVVVSQSGVREKTTLVNIIRKASSNADLSSLVL 179 ++++G +V + L+VG NT+ VV +Q G KT V + R S+NA+LS+L L Sbjct: 833 VTINGVSVASGTPSGAIPLSVGSNTINTVVTAQDGSTTKTYTVVVTRAPSTNANLSNLAL 892 Query: 180 SDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNG-NVTPNAQPRWVDLQV 238 S G L PA+ T YA +V N S + VTPT +D AT+++NG VT L V Sbjct: 893 SAGTLTPAFASGTTSYAASVSNATSTITVTPTVQDATATITVNGVAVTSGTASVPFALVV 952 Query: 239 GVNEFNVLVQAEDGVTAKNYVLTIVRKASSDADLINITLSGKPLSGGFDRTTSTYFEYVA 298 G N N +V A+DG T K Y + + R AS++A+L N LS LS F T++Y V+ Sbjct: 953 GANTLNTVVTAQDGATTKIYTVMVTRAASTNANLNNFALSSGTLSPAFASGTTSYTASVS 1012 Query: 299 NNIDSMAVTATTSDEQATYTINGVQSAGG---VPVPLAVGENVVTIAVTAADKVTTKEYT 355 N ++ VT T D AT +NGV G VP L VG N + VTA D TTK YT Sbjct: 1013 NATSTITVTPTAQDSTATIKVNGVAVTSGTASVPFALVVGANTLNTVVTAQDGTTTKTYT 1072 Query: 356 VTIVRAASSNANLLELTMTDLSDNAISLTPVMGTLSYNGTVEDSVSAAKLKAVVDDANAS 415 V + RA S+N NL L LS +S + GT SY +V ++ S+ + V D A Sbjct: 1073 VVVTRAPSTNTNLSNLV---LSAGTLSPSFASGTTSYTASVTNATSSITVTPTVQDTTA- 1128 Query: 416 TSVSVNGVWIED---LNAVPLTTGLNVIEVNVTAQDG-SMKVYTINLVR-----NPSTDA 466 ++ VNG + A+ LT G N I+ VTAQDG ++K YT+ + R N +T + Sbjct: 1129 -TIKVNGATVASGSASGAITLTVGSNTIDTQVTAQDGTTIKTYTVVVTRAAPVINSTTAS 1187 Query: 467 ALLEMRITPGELT 479 AL +T +T Sbjct: 1188 ALTFSAVTRSSIT 1200 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 3/100 (3%) Query: 267 SSDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQATYTINGVQSAG 326 S++ADL ++T+S L+ F T ++Y V N S+ VT T +D A T+NGV+ A Sbjct: 278 SNNADLGSMTISAGELTPAFSSTVTSYTAAVTNGTSSITVTPTLADANAEVTVNGVEVAS 337 Query: 327 GV---PVPLAVGENVVTIAVTAADKVTTKEYTVTIVRAAS 363 G P+ LAVG+N ++I VTA D+VTTK YT+ + RAA+ Sbjct: 338 GTASSPISLAVGDNTISIRVTAQDEVTTKTYTIVVNRAAT 377 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 2/116 (1%) Query: 169 SSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNG-NVTP 227 S+NADL S+ +S G+L PA+ T Y V N S + VTPT D +A V++NG V Sbjct: 278 SNNADLGSMTISAGELTPAFSSTVTSYTAAVTNGTSSITVTPTLADANAEVTVNGVEVAS 337 Query: 228 NAQPRWVDLQVGVNEFNVLVQAEDGVTAKNYVLTIVRKASSDADLINITLSGKPLS 283 + L VG N ++ V A+D VT K Y + +V +A++ N+T + L+ Sbjct: 338 GTASSPISLAVGDNTISIRVTAQDEVTTKTYTI-VVNRAATGGGGSNVTYHTRGLT 392 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 664 SSNADLNNISVIAGALDPAFDPAVSEYTVEVENDVDSIALNPVVADTKA-----GSQIIG 718 S+NADL ++++ AG L PAF V+ YT V N SI + P +AD A G ++ Sbjct: 278 SNNADLGSMTISAGELTPAFSSTVTSYTAAVTNGTSSITVTPTLADANAEVTVNGVEVAS 337 Query: 719 RDGASLNHLVEGDNVFDILVTAEDG-TVKIYTVKVIKA 755 +S L GDN I VTA+D T K YT+ V +A Sbjct: 338 GTASSPISLAVGDNTISIRVTAQDEVTTKTYTIVVNRA 375 >A6M2K3.1 A6M2K3_CLOB8 Putative cell wall binding repeat-containing protein Length = 744 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 170/330 (51%), Gaps = 14/330 (4%) Query: 39 NLAAGNNKYLIEVTAQDGVTKKSYSLFILRAPSDVADXXXXXXXXXXXXPVFNNDDTGYS 98 NL G+N I VT Q+ + Y L I + A P FN+ Y+ Sbjct: 219 NLTGGDNVISIAVTNQN--ISRQYKLIITKKGE--AKLQSLVPSTGTLSPAFNSSTYDYT 274 Query: 99 VEVPNEVSSLEITPKLLDAAAGLSVDGNVHIDDTAYTKN--LNVGMNTVKIVVVSQSGVR 156 ++VP +++ TP +D ++ + V+G V + + ++N L+ G N V+++V ++ G Sbjct: 275 LQVPTAQTTIAFTPTAVDNSSTIKVNG-VTVKSGSRSQNIKLDEGENDVEVIVTTKDG-D 332 Query: 157 EKTTLVNIIRKA-SSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDV 215 T + + R A ++ L L L+ G L PA++K Y+ TVDN V+ + VTPT EDV Sbjct: 333 TNTYNIKVTRTALFRSSQLIGLTLTSGTLTPAFNKGIYEYSGTVDNSVTSIGVTPTAEDV 392 Query: 216 HATVSLNGNVTPN-AQPRWVDLQVGVNEFNVLVQAEDGVTAKNYVLTIVRKASSD-ADLI 273 +AT+++NG P+ A ++ L G N NV V G + YVL I R+ D +L Sbjct: 393 NATITVNGKKVPSGATSPYISLDEGGNTINVKVTDSKG-NSNTYVLNITRRYPKDNVNLA 451 Query: 274 NITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQATYTINGVQSAGGVP--VP 331 +++++ +S FD T Y VA NI+ + V T+ +++A ING + G + Sbjct: 452 SLSVTDGTMSPKFDPETYLYSVKVARNIEKVRVMYTSQNDKAKIKINGKEYTNGQSDYIK 511 Query: 332 LAVGENVVTIAVTAADKVTTKEYTVTIVRA 361 L +G N+V + VTA D TT Y ++++R Sbjct: 512 LDIGANLVVVEVTAEDGKTTTTYKLSVIRG 541 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 6/268 (2%) Query: 1 MAVANAVTAAEFTPTAAEGAS-IKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDGVTK 59 + V A T FTPTA + +S IKVNGV SG+ L G N + VT +DG T Sbjct: 275 LQVPTAQTTIAFTPTAVDNSSTIKVNGVTVKSGSRSQNIKLDEGENDVEVIVTTKDGDTN 334 Query: 60 KSYSLFILR-APSDVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAA 118 +Y++ + R A + P FN YS V N V+S+ +TP D Sbjct: 335 -TYNIKVTRTALFRSSQLIGLTLTSGTLTPAFNKGIYEYSGTVDNSVTSIGVTPTAEDVN 393 Query: 119 AGLSVDGN-VHIDDTAYTKNLNVGMNTVKIVVVSQSGVREKTTLVNIIRKA-SSNADLSS 176 A ++V+G V T+ +L+ G NT+ + V G T ++NI R+ N +L+S Sbjct: 394 ATITVNGKKVPSGATSPYISLDEGGNTINVKVTDSKG-NSNTYVLNITRRYPKDNVNLAS 452 Query: 177 LVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNGNVTPNAQPRWVDL 236 L ++DG + P +D Y+V V + ++ V T ++ A + +NG N Q ++ L Sbjct: 453 LSVTDGTMSPKFDPETYLYSVKVARNIEKVRVMYTSQNDKAKIKINGKEYTNGQSDYIKL 512 Query: 237 QVGVNEFNVLVQAEDGVTAKNYVLTIVR 264 +G N V V AEDG T Y L+++R Sbjct: 513 DIGANLVVVEVTAEDGKTTTTYKLSVIR 540 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 131/475 (27%), Positives = 203/475 (42%), Gaps = 54/475 (11%) Query: 317 YTINGVQSAG-------GVPVPLAVGENVVTIAVTAADKVTTKEYTVTIVRAASSNANLL 369 Y+I GVQS+ G+P + VV +D +T+T+ SS + Sbjct: 85 YSIVGVQSSNSSFMNVKGIPNSSGGKDYVVNTITDYSD------FTLTVTMKDSSGKQFI 138 Query: 370 E-LTMTDLSDNAISLTPVMGTLSYNGT------------------VEDSVSAAKLKAVVD 410 + M SD+++S + TL T V V AK++ + D Sbjct: 139 YPIKMKFESDSSLSFGTLRVTLDGKATYDLLFTQTDANGNYNIPDVNSDVKMAKVQ-LFD 197 Query: 411 DANASTSVSVNGVWIEDLNAVPLTTGLNVIEVNVTAQDGSMKVYTINLVRNPSTDAALLE 470 + + S NG V LT G NVI + VT Q+ S + L+ +A L Sbjct: 198 NNKTPMNFSANGGSSAAEATVNLTGGDNVISIAVTNQNISRQY---KLIITKKGEAKLQS 254 Query: 471 MRITPGELTPGFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKKNGAS--TGVTGNT 528 + + G L+P F ++T +K NG + +G Sbjct: 255 LVPSTGTLSPAFNSSTYDYTLQVPTAQTTIAFTPTAVDNSST--IKVNGVTVKSGSRSQN 312 Query: 529 VALDEGTNQITVQVTAADASTQMTYTVTVNRAILPKXXXXXXXXXXXXXGTEILNPEFSA 588 + LDEG N + V VT D T TY + V R L + GT L P F+ Sbjct: 313 IKLDEGENDVEVIVTTKDGDTN-TYNIKVTRTALFRSSQLIGLTLTS--GT--LTPAFNK 367 Query: 589 EIFKYSLSVPYEVSQVELDALKGDINARLTVNGVTVDNPM---LVKLAEGLNTVNLKVTA 645 I++YS +V V+ + + D+NA +TVNG V + + L EG NT+N+KVT Sbjct: 368 GIYEYSGTVDNSVTSIGVTPTAEDVNATITVNGKKVPSGATSPYISLDEGGNTINVKVTD 427 Query: 646 QDGKTESVYEVEITRKSRSSNADLNNISVIAGALDPAFDPAVSEYTVEVENDVDSIALNP 705 G + + Y + ITR+ N +L ++SV G + P FDP Y+V+V +++ + + Sbjct: 428 SKGNSNT-YVLNITRRYPKDNVNLASLSVTDGTMSPKFDPETYLYSVKVARNIEKVRVMY 486 Query: 706 VVADTKAGSQIIGRD---GAS-LNHLVEGDNVFDILVTAEDG-TVKIYTVKVIKA 755 + KA +I G++ G S L G N+ + VTAEDG T Y + VI+ Sbjct: 487 TSQNDKAKIKINGKEYTNGQSDYIKLDIGANLVVVEVTAEDGKTTTTYKLSVIRG 541 >B4CUS7.1 B4CUS7_9BACT Conserved repeat domain protein Length = 1886 Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 116/215 (53%), Gaps = 6/215 (2%) Query: 169 SSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNGNVTPN 228 +SNA+LS+LV+S G L P + Y +V N + + +TPT D +A+V +NG T N Sbjct: 1568 ASNANLSNLVVSAGTLSPVFSSGTISYTDSVANAAASMTLTPTLGDGNASVKVNGIPTIN 1627 Query: 229 AQPRW-VDLQVGVNEFNVLVQAEDGVTAKNYVLTIVRKASSDADLINITLSGKPLSGGFD 287 P ++L VG N NV+V A+DG T K Y L + R SS+A L N+ S L+ F Sbjct: 1628 NNPSSSINLNVGANTINVVVTAQDGYTVKTYSLVVTRAPSSNATLANLVPSSGVLTPAFA 1687 Query: 288 RTTSTYFEYVANNIDSMAVTATTSDEQATYTINGVQSAGGVP---VPLAVGENVVTIAVT 344 TT+TY V++ ++ +T T +D AT T+NG A G P + L G N VT VT Sbjct: 1688 GTTTTYTANVSDTTGAITLTPTVADSTATVTVNGAAVASGSPSNSISLNTGPNTVTAVVT 1747 Query: 345 AADKVTTKEYTVTIVRAASSNANLLELTMTDLSDN 379 A D TT Y++T+ R +N LT DN Sbjct: 1748 AQDGTTTLTYSLTVNRL--TNVQTWRLTHFGTPDN 1780 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 2/204 (0%) Query: 63 SLFILRAPSDVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLS 122 S + AP+ A+ PVF++ Y+ V N +S+ +TP L D A + Sbjct: 1560 SALVDYAPASNANLSNLVVSAGTLSPVFSSGTISYTDSVANAAASMTLTPTLGDGNASVK 1619 Query: 123 VDGNVHIDDTAYTK-NLNVGMNTVKIVVVSQSGVREKTTLVNIIRKASSNADLSSLVLSD 181 V+G I++ + NLNVG NT+ +VV +Q G KT + + R SSNA L++LV S Sbjct: 1620 VNGIPTINNNPSSSINLNVGANTINVVVTAQDGYTVKTYSLVVTRAPSSNATLANLVPSS 1679 Query: 182 GQLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNGNVTPNAQPR-WVDLQVGV 240 G L PA+ T Y V + + +TPT D ATV++NG + P + L G Sbjct: 1680 GVLTPAFAGTTTTYTANVSDTTGAITLTPTVADSTATVTVNGAAVASGSPSNSISLNTGP 1739 Query: 241 NEFNVLVQAEDGVTAKNYVLTIVR 264 N +V A+DG T Y LT+ R Sbjct: 1740 NTVTAVVTAQDGTTTLTYSLTVNR 1763 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 94/180 (52%), Gaps = 10/180 (5%) Query: 582 LNPEFSAEIFKYSLSVPYEVSQVELDALKGDINARLTVNGVTV--DNPML-VKLAEGLNT 638 L+P FS+ Y+ SV + + L GD NA + VNG+ +NP + L G NT Sbjct: 1583 LSPVFSSGTISYTDSVANAAASMTLTPTLGDGNASVKVNGIPTINNNPSSSINLNVGANT 1642 Query: 639 VNLKVTAQDGKTESVYEVEITRKSRSSNADLNNISVIAGALDPAFDPAVSEYTVEVENDV 698 +N+ VTAQDG T Y + +TR + SSNA L N+ +G L PAF + YT V + Sbjct: 1643 INVVVTAQDGYTVKTYSLVVTR-APSSNATLANLVPSSGVLTPAFAGTTTTYTANVSDTT 1701 Query: 699 DSIALNPVVADTKA-----GSQIIGRDGASLNHLVEGDNVFDILVTAEDGTVKI-YTVKV 752 +I L P VAD+ A G+ + ++ L G N +VTA+DGT + Y++ V Sbjct: 1702 GAITLTPTVADSTATVTVNGAAVASGSPSNSISLNTGPNTVTAVVTAQDGTTTLTYSLTV 1761 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 17/207 (8%) Query: 361 AASSNANLLELTMTDLSDNAISLTPVM--GTLSYNGTVEDSVSAAKLKAVVDDANASTSV 418 A +SNANL L ++ A +L+PV GT+SY +V ++ ++ L + D NAS V Sbjct: 1566 APASNANLSNLVVS-----AGTLSPVFSSGTISYTDSVANAAASMTLTPTLGDGNAS--V 1618 Query: 419 SVNGVWIEDLNAVP-----LTTGLNVIEVNVTAQDG-SMKVYTINLVRNPSTDAALLEMR 472 VNG I +N P L G N I V VTAQDG ++K Y++ + R PS++A L + Sbjct: 1619 KVNG--IPTINNNPSSSINLNVGANTINVVVTAQDGYTVKTYSLVVTRAPSSNATLANLV 1676 Query: 473 ITPGELTPGFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKKNGASTGVTGNTVALD 532 + G LTP F AT + ++G N+++L+ Sbjct: 1677 PSSGVLTPAFAGTTTTYTANVSDTTGAITLTPTVADSTATVTVNGAAVASGSPSNSISLN 1736 Query: 533 EGTNQITVQVTAADASTQMTYTVTVNR 559 G N +T VTA D +T +TY++TVNR Sbjct: 1737 TGPNTVTAVVTAQDGTTTLTYSLTVNR 1763 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 16/203 (7%) Query: 267 SSDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQATYTINGVQSAG 326 +S+A+L N+ +S LS F T +Y + VAN SM +T T D A+ +NG+ + Sbjct: 1568 ASNANLSNLVVSAGTLSPVFSSGTISYTDSVANAAASMTLTPTLGDGNASVKVNGIPTIN 1627 Query: 327 GVP---VPLAVGENVVTIAVTAADKVTTKEYTVTIVRAASSNANLLELTMTDLSDNAISL 383 P + L VG N + + VTA D T K Y++ + RA SSNA T+ +L ++ L Sbjct: 1628 NNPSSSINLNVGANTINVVVTAQDGYTVKTYSLVVTRAPSSNA-----TLANLVPSSGVL 1682 Query: 384 TPVMG--TLSYNGTVEDSVSAAKLKAVVDDANASTSVSVNGVWIED---LNAVPLTTGLN 438 TP T +Y V D+ A L V D+ A+ V+VNG + N++ L TG N Sbjct: 1683 TPAFAGTTTTYTANVSDTTGAITLTPTVADSTAT--VTVNGAAVASGSPSNSISLNTGPN 1740 Query: 439 VIEVNVTAQDGSMKV-YTINLVR 460 + VTAQDG+ + Y++ + R Sbjct: 1741 TVTAVVTAQDGTTTLTYSLTVNR 1763 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 84/167 (50%), Gaps = 2/167 (1%) Query: 2 AVANAVTAAEFTPTAAEG-ASIKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDGVTKK 60 +VANA + TPT +G AS+KVNG+ + P NL G N + VTAQDG T K Sbjct: 1597 SVANAAASMTLTPTLGDGNASVKVNGIPTINNNPSSSINLNVGANTINVVVTAQDGYTVK 1656 Query: 61 SYSLFILRAPSDVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAG 120 +YSL + RAPS A P F T Y+ V + ++ +TP + D+ A Sbjct: 1657 TYSLVVTRAPSSNATLANLVPSSGVLTPAFAGTTTTYTANVSDTTGAITLTPTVADSTAT 1716 Query: 121 LSVDG-NVHIDDTAYTKNLNVGMNTVKIVVVSQSGVREKTTLVNIIR 166 ++V+G V + + +LN G NTV VV +Q G T + + R Sbjct: 1717 VTVNGAAVASGSPSNSISLNTGPNTVTAVVTAQDGTTTLTYSLTVNR 1763 >C4ILH7.1 C4ILH7_CLOBU Putative cell wall binding repeat-containing protein Length = 745 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 19/347 (5%) Query: 21 SIKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDGVTKKSYSLFILRAPSDVADXXXXX 80 S KVNG + + NL G+N IE+T K Y+L I + VA Sbjct: 205 SFKVNGGTNKT------VNLVGGDN--TIELTVTSAGYSKVYTLVITKKG--VAKLKSLV 254 Query: 81 XXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLSVDG-NVHIDDTAYTKNLN 139 P FN+D T Y+V VP ++ TP +D ++ + V V + LN Sbjct: 255 PSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDIKLN 314 Query: 140 VGMNTVKIVVVSQSGVREKTTLVNIIR-KASSNADLSSLVLSDGQLDPAYDKNQTRYAVT 198 G N + IVV ++ G T V + R + +A+L SL L+ G L P ++K +Y Sbjct: 315 EGENEIPIVVTNKDG-DVTTYKVTVTRTEKFRSANLKSLKLTSGTLSPTFNKGVYQYTTI 373 Query: 199 VDNQVSELAVTPTPEDVHATVSLNGNVTPN-AQPRWVDLQVGVNEFNVLVQAEDGVTAKN 257 V+N VS + VTP ED +AT+ +NG P+ A +++L G N NV V G Sbjct: 374 VENTVSSVGVTPVAEDANATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDSKG-NDNT 432 Query: 258 YVLTIVRKAS-SDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQAT 316 YV+ I RK S ++ +L +++++ S FD Y V NI+ + + T +E++ Sbjct: 433 YVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFETQNEKSK 492 Query: 317 YTINGVQSAGGV---PVPLAVGENVVTIAVTAADKVTTKEYTVTIVR 360 TINGV+ G + L +G N V + V + D +T YT++I+R Sbjct: 493 VTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIR 539 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 125/476 (26%), Positives = 205/476 (43%), Gaps = 39/476 (8%) Query: 295 EYVANNIDSMAVTATTSDEQATYTINGVQSAGGVPVPLAVGENVVTIAVTAADKVTTKEY 354 E V ++ D M +T S T+TI ++ + + V ++ ++ T + Sbjct: 91 ESVKSSSDKMKITKAVSGTTNTFTIGTIKDYSNFKLTVKVKN--------SSGEINTYDI 142 Query: 355 TVTIVRAASSNANLLELTMTDLSDNAISLTPVM----GTLSYNGTVEDSVSAAKLK-AVV 409 V +S N L +T+ + D+ ++LT G Y E + A K K + Sbjct: 143 RVEFNIDSSLEFNKLRITVDN--DDPVTLTYTQCDSEGIYYYE---ESNPEAKKAKIEMF 197 Query: 410 DDANASTSVSVNGVWIEDLNAVPLTTGLNVIEVNVTAQDGSMKVYTINLVRNPSTDAALL 469 DD+N + S VNG V L G N IE+ VT+ G KVYT+ + + A L Sbjct: 198 DDSNNAMSFKVNG---GTNKTVNLVGGDNTIELTVTSA-GYSKVYTLVITKKGV--AKLK 251 Query: 470 EMRITPGELTPGFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKKNGASTGVTGNTV 529 + + G L+P F ++T +KK ++G + Sbjct: 252 SLVPSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDI 311 Query: 530 ALDEGTNQITVQVTAADASTQMTYTVTVNRAILPKXXXXXXXXXXXXXGTEILNPEFSAE 589 L+EG N+I + VT D TY VTV R K GT L+P F+ Sbjct: 312 KLNEGENEIPIVVTNKDGDV-TTYKVTVTRT--EKFRSANLKSLKLTSGT--LSPTFNKG 366 Query: 590 IFKYSLSVPYEVSQVELDALKGDINARLTVNGVTVDNPM---LVKLAEGLNTVNLKVTAQ 646 +++Y+ V VS V + + D NA + VNG + + + L EG N +N+ VT Sbjct: 367 VYQYTTIVENTVSSVGVTPVAEDANATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDS 426 Query: 647 DGKTESVYEVEITRKSRSSNADLNNISVIAGALDPAFDPAVSEYTVEVENDVDSIALNPV 706 G ++ Y + ITRK +N +L+++SV G P FDP + Y+V+V +++ + + Sbjct: 427 KG-NDNTYVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFE 485 Query: 707 VADTKAGSQIIGRDGASLNH-----LVEGDNVFDILVTAEDGTVKI-YTVKVIKAK 756 + K+ I G + S L G N + V +ED + YT+ +I+ K Sbjct: 486 TQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIRDK 541 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 87/280 (31%), Positives = 131/280 (46%), Gaps = 15/280 (5%) Query: 12 FTPTAAEGAS-IKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDG-VTKKSYSLFILRA 69 FTPTA + +S IKV + SG L G N+ I VT +DG VT +Y + + R Sbjct: 284 FTPTAVDNSSTIKVKKITVASGKKSQDIKLNEGENEIPIVVTNKDGDVT--TYKVTVTRT 341 Query: 70 PS-DVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLSVDGN-V 127 A+ P FN Y+ V N VSS+ +TP DA A + V+G + Sbjct: 342 EKFRSANLKSLKLTSGTLSPTFNKGVYQYTTIVENTVSSVGVTPVAEDANATIEVNGKEI 401 Query: 128 HIDDTAYTKNLNVGMNTVKIVVVSQSGVREKTTLVNIIRKAS-SNADLSSLVLSDGQLDP 186 T+ NL+ G N + + V G + T ++ I RK S +N +LSSL ++DG P Sbjct: 402 PSGATSPYINLDEGGNVINVTVTDSKG-NDNTYVIMITRKYSKNNVNLSSLSVTDGTFSP 460 Query: 187 AYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNG-NVTPNAQPRWVDLQVGVNEFNV 245 +D Y+V V + E+ + ++ + V++NG Q + L +G N V Sbjct: 461 KFDPEIYAYSVKVPRNIEEVRIKFETQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVV 520 Query: 246 LVQAEDGVTAKNYVLTIVRKASSDADLINITLSGKPLSGG 285 V +ED + NY L+I+R D + TL+ L GG Sbjct: 521 KVVSEDNKSTVNYTLSIIR------DKVQGTLNEWVLVGG 554 >B1QUG8.1 B1QUG8_CLOBU Putative collagenolytic protease Length = 745 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 19/347 (5%) Query: 21 SIKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDGVTKKSYSLFILRAPSDVADXXXXX 80 S KVNG + + NL G+N IE+T K Y+L I + VA Sbjct: 205 SFKVNGGTNKT------VNLVGGDN--TIELTVTSAGYSKVYTLVITKKG--VAKLKSLV 254 Query: 81 XXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLSVDG-NVHIDDTAYTKNLN 139 P FN+D T Y+V VP ++ TP +D ++ + V V + LN Sbjct: 255 PSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDIKLN 314 Query: 140 VGMNTVKIVVVSQSGVREKTTLVNIIR-KASSNADLSSLVLSDGQLDPAYDKNQTRYAVT 198 G N + IVV ++ G T V + R + +A+L SL L+ G L P ++K +Y Sbjct: 315 EGENEIPIVVTNKDG-DVTTYKVTVTRTEKFRSANLKSLKLTSGTLSPTFNKGVYQYTTI 373 Query: 199 VDNQVSELAVTPTPEDVHATVSLNGNVTPN-AQPRWVDLQVGVNEFNVLVQAEDGVTAKN 257 V+N VS + VTP ED +AT+ +NG P+ A +++L G N NV V G Sbjct: 374 VENTVSSVGVTPVAEDANATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDSKG-NDNT 432 Query: 258 YVLTIVRKAS-SDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQAT 316 YV+ I RK S ++ +L +++++ S FD Y V NI+ + + T +E++ Sbjct: 433 YVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFETQNEKSK 492 Query: 317 YTINGVQSAGGV---PVPLAVGENVVTIAVTAADKVTTKEYTVTIVR 360 TINGV+ G + L +G N V + V + D +T YT++I+R Sbjct: 493 VTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIR 539 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 125/476 (26%), Positives = 205/476 (43%), Gaps = 39/476 (8%) Query: 295 EYVANNIDSMAVTATTSDEQATYTINGVQSAGGVPVPLAVGENVVTIAVTAADKVTTKEY 354 E V ++ D M +T S T+TI ++ + + V ++ ++ T + Sbjct: 91 ESVKSSSDKMKITKAVSGTTNTFTIGTIKDYSNFKLTVKVKN--------SSGEINTYDI 142 Query: 355 TVTIVRAASSNANLLELTMTDLSDNAISLTPVM----GTLSYNGTVEDSVSAAKLK-AVV 409 V +S N L +T+ + D+ ++LT G Y E + A K K + Sbjct: 143 RVEFNIDSSLEFNKLRITVDN--DDPVTLTYTQCDSEGIYYYE---ESNPEAKKAKIEMF 197 Query: 410 DDANASTSVSVNGVWIEDLNAVPLTTGLNVIEVNVTAQDGSMKVYTINLVRNPSTDAALL 469 DD+N + S VNG V L G N IE+ VT+ G KVYT+ + + A L Sbjct: 198 DDSNNAMSFKVNG---GTNKTVNLVGGDNTIELTVTSA-GYSKVYTLVITKKGV--AKLK 251 Query: 470 EMRITPGELTPGFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKKNGASTGVTGNTV 529 + + G L+P F ++T +KK ++G + Sbjct: 252 SLVPSTGSLSPSFNSDTTEYTVTVPTTQETIAFTPTAVDNSSTIKVKKITVASGKKSQDI 311 Query: 530 ALDEGTNQITVQVTAADASTQMTYTVTVNRAILPKXXXXXXXXXXXXXGTEILNPEFSAE 589 L+EG N+I + VT D TY VTV R K GT L+P F+ Sbjct: 312 KLNEGENEIPIVVTNKDGDV-TTYKVTVTRT--EKFRSANLKSLKLTSGT--LSPTFNKG 366 Query: 590 IFKYSLSVPYEVSQVELDALKGDINARLTVNGVTVDNPM---LVKLAEGLNTVNLKVTAQ 646 +++Y+ V VS V + + D NA + VNG + + + L EG N +N+ VT Sbjct: 367 VYQYTTIVENTVSSVGVTPVAEDANATIEVNGKEIPSGATSPYINLDEGGNVINVTVTDS 426 Query: 647 DGKTESVYEVEITRKSRSSNADLNNISVIAGALDPAFDPAVSEYTVEVENDVDSIALNPV 706 G ++ Y + ITRK +N +L+++SV G P FDP + Y+V+V +++ + + Sbjct: 427 KG-NDNTYVIMITRKYSKNNVNLSSLSVTDGTFSPKFDPEIYAYSVKVPRNIEEVRIKFE 485 Query: 707 VADTKAGSQIIGRDGASLNH-----LVEGDNVFDILVTAEDGTVKI-YTVKVIKAK 756 + K+ I G + S L G N + V +ED + YT+ +I+ K Sbjct: 486 TQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVVKVVSEDNKSTVNYTLSIIRDK 541 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 87/280 (31%), Positives = 131/280 (46%), Gaps = 15/280 (5%) Query: 12 FTPTAAEGAS-IKVNGVDHPSGTPFFITNLAAGNNKYLIEVTAQDG-VTKKSYSLFILRA 69 FTPTA + +S IKV + SG L G N+ I VT +DG VT +Y + + R Sbjct: 284 FTPTAVDNSSTIKVKKITVASGKKSQDIKLNEGENEIPIVVTNKDGDVT--TYKVTVTRT 341 Query: 70 PS-DVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKLLDAAAGLSVDGN-V 127 A+ P FN Y+ V N VSS+ +TP DA A + V+G + Sbjct: 342 EKFRSANLKSLKLTSGTLSPTFNKGVYQYTTIVENTVSSVGVTPVAEDANATIEVNGKEI 401 Query: 128 HIDDTAYTKNLNVGMNTVKIVVVSQSGVREKTTLVNIIRKAS-SNADLSSLVLSDGQLDP 186 T+ NL+ G N + + V G + T ++ I RK S +N +LSSL ++DG P Sbjct: 402 PSGATSPYINLDEGGNVINVTVTDSKG-NDNTYVIMITRKYSKNNVNLSSLSVTDGTFSP 460 Query: 187 AYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLNG-NVTPNAQPRWVDLQVGVNEFNV 245 +D Y+V V + E+ + ++ + V++NG Q + L +G N V Sbjct: 461 KFDPEIYAYSVKVPRNIEEVRIKFETQNEKSKVTINGVEYKSGQQSDKIKLDLGANTVVV 520 Query: 246 LVQAEDGVTAKNYVLTIVRKASSDADLINITLSGKPLSGG 285 V +ED + NY L+I+R D + TL+ L GG Sbjct: 521 KVVSEDNKSTVNYTLSIIR------DKVQGTLNEWVLVGG 554 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.310 0.127 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,940,231,352 Number of extensions: 161307877 Number of successful extensions: 368824 Number of sequences better than 1.0e-05: 73 Number of HSP's gapped: 368477 Number of HSP's successfully gapped: 204 Length of query: 926 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 781 Effective length of database: 1,694,649,028 Effective search space: 1323520890868 Effective search space used: 1323520890868 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 136 (57.0 bits)