BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0128.0010.p (291 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1IB24.1 C1IB24_9CLOT Putative uncharacterized protein 247 9e-64 C2W693.1 C2W693_BACCE Putative uncharacterized protein 244 9e-63 Q97ES5.1 Q97ES5_CLOAB Galactose mutarotase related enzyme 241 7e-62 A7GND5.1 A7GND5_BACCN Aldose 1-epimerase 240 9e-62 B5V310.1 B5V310_BACCE Putative lacX protein 238 3e-61 >C1IB24.1 C1IB24_9CLOT Putative uncharacterized protein Length = 292 Score = 247 bits (631), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 121/292 (41%), Positives = 177/292 (60%), Gaps = 1/292 (0%) Query: 1 MNTILRSGSARAEISSLGAELVSFTKNDTGTEYIWSGDAAYWTGRSPVLFPIIGAVRNGE 60 M L + + + + G EL + EY+W+G+ AYW SP+LFPI+G V++G+ Sbjct: 1 MKYFLENENIKISTDTFGGELNNLFSKKNSIEYLWNGNEAYWKYHSPILFPIVGKVKDGK 60 Query: 61 IKVDGQTYKLANHGFARRSEFTIVEADESRAVFLLTSSGHTLSSYPFQFNLYITYTLNES 120 VD + Y+L HG AR EF ++E D++ VF L S L YP++F+L ++Y L ++ Sbjct: 61 YIVDNKEYELPQHGLARTREFNMIEKDDNHIVFELLWSEDILKVYPYKFSLKLSYELLDN 120 Query: 121 TLKLEYRVENTDGQNIFFQLGTHPAFNCPLDENGSFSDYVLEFSENETLDREFLNSAGLR 180 +K+ Y V N D ++I+F +G HPAF CPL + F DY E ++ ET D LNS Sbjct: 121 GVKVGYNVTNLDDKDIYFSIGGHPAFMCPLMDGEKFEDYYFELNKKETSDLMELNSNLGY 180 Query: 181 ISGRSEAVLSGERILPLTHEMFKDDALVFQNVASRTITLKSKLTEKSVAVSFEGFPDLGI 240 +G + + E I+ L+ ++FKDDA+VF ++ S I+LKSK KS+++ F GFP L I Sbjct: 181 FTGTKKPFFNNENIINLSLDLFKDDAIVFGDLESNIISLKSKNHNKSLSMDFSGFPYLAI 240 Query: 241 WQKPN-APFLCIEPWQGFADSDEFQGELSEKEGIVSLAPGDNFTSSLTIKID 291 W KP APF+CIEPW G AD F GE +KEGI L+ G++F +S + ID Sbjct: 241 WTKPTGAPFVCIEPWYGHADFYNFNGEFKDKEGIQKLSVGESFKASYDLYID 292 >C2W693.1 C2W693_BACCE Putative uncharacterized protein Length = 290 Score = 244 bits (622), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 172/291 (59%), Gaps = 3/291 (1%) Query: 1 MNTILRSGSARAEISSLGAELVSFTKNDTGTEYIWSGDAAYWTGRSPVLFPIIGAVRNGE 60 M T +++ IS GAEL S + TEY+W GD YW R+P+LFPI+G + N Sbjct: 1 MTTTIQNEKVIVSISEQGAELQSIRLKEDNTEYLWQGDKKYWGRRAPILFPIVGRLVNNT 60 Query: 61 IKVDGQTYKLANHGFARRSEFTIVEADESRAVFLLTSSGHTLSSYPFQFNLYITYTLNES 120 VD + Y L HGFAR F + E E++ + +TS+ TL +YP++F L ++Y L+E Sbjct: 61 YYVDDKPYSLTQHGFARDLTFAVTEQSETKITYAVTSNSETLQNYPYEFELRVSYELDEQ 120 Query: 121 TLKLEYRVENTDGQNIFFQLGTHPAFNCPLDENGSFSDYVLEFSENETLDREFLNSAGLR 180 + + Y V N++ +FF +G HP FNCPL E SF+DY L F+ E L+ L G Sbjct: 121 NIHVTYEVHNSNSTEMFFSIGAHPGFNCPLVEGESFTDYHLSFNGLEHLETSILK--GPF 178 Query: 181 ISGRSEAVLSGERILPLTHEMFKDDALVFQNVASRTITLKSKLTEKSVAVSFEGFPDLGI 240 +S + ++ + LPLT+++FK+DAL+F+N+ + I ++S K V V+FEGFP +G+ Sbjct: 179 LSKEKQLIVENKAELPLTYDLFKNDALIFENMNTNEIAIRSHKHNKFVKVAFEGFPFVGV 238 Query: 241 WQKPN-APFLCIEPWQGFADSDEFQGELSEKEGIVSLAPGDNFTSSLTIKI 290 W N APFLCIEPW G AD E EK+G+ SL + FT +I I Sbjct: 239 WTPGNDAPFLCIEPWYGIADEVEPAKAFKEKKGVQSLQANETFTCRYSITI 289 >Q97ES5.1 Q97ES5_CLOAB Galactose mutarotase related enzyme Length = 298 Score = 241 bits (614), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 120/297 (40%), Positives = 179/297 (60%), Gaps = 8/297 (2%) Query: 1 MNTILRSGSARAEISSLGAELVSFTKNDTGTEYIWSGDAAYWTGRSPVLFPIIGAVRNGE 60 M L + + +AE+S GAEL S +T EYIW+ +++YW +P+LFPI+G V++ + Sbjct: 1 MCVRLENENFKAELSESGAELTSLKSKNTDNEYIWTANSSYWGRHAPILFPIVGKVKDNK 60 Query: 61 IKVDGQTYKLANHGFARRSEFTIVEADESRAVFLLTSSGHTLSSYPFQFNLYITYTLNES 120 ++ + Y L+ HGFAR EF + + RAVF L + TL YP++F L + Y L +S Sbjct: 61 YRIADKVYNLSQHGFARDMEFEVEDNASDRAVFKLVWNDETLEKYPYKFELRVIYVLKDS 120 Query: 121 TLKLEYRVENTDGQNIFFQLGTHPAFNCPL------DENGSFSDYVLEFSENETLDREFL 174 T+ + Y V+N D ++IFF +G HP FNCP+ ++ F DY +EF + ET L Sbjct: 121 TVDVTYNVKNVDDKDIFFSIGAHPGFNCPVIGKQSENDELQFEDYYIEFEKRETTGVVKL 180 Query: 175 NSAGLRISGRSEAVLSGERILPLTHEMFKDDALVFQNVASRTITLKSKLTEKSVAVSFEG 234 NS+ L +S + L IL L+ ++FK AL+ +++ S +I+LK+ SV VSFEG Sbjct: 181 NSSNL-LSRNTSPFLYASNILNLSEKLFKQGALILKDLDSTSISLKNDKNTTSVTVSFEG 239 Query: 235 FPDLGIWQKPN-APFLCIEPWQGFADSDEFQGELSEKEGIVSLAPGDNFTSSLTIKI 290 FP +G+W KP APF+CIEPW G AD ++F G+ EKE + L G F + +I I Sbjct: 240 FPYVGLWSKPEGAPFVCIEPWFGHADYEDFNGDFREKEDGLKLEVGKEFECTYSITI 296 >A7GND5.1 A7GND5_BACCN Aldose 1-epimerase Length = 290 Score = 240 bits (613), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 121/291 (41%), Positives = 169/291 (58%), Gaps = 3/291 (1%) Query: 1 MNTILRSGSARAEISSLGAELVSFTKNDTGTEYIWSGDAAYWTGRSPVLFPIIGAVRNGE 60 M +++ IS GAEL S + TEY+W GDA YW R+P+LFPI+G + + Sbjct: 1 MIATIQNEKVIVSISEKGAELQSIRLKEDNTEYLWQGDANYWGRRAPLLFPIVGRLVDHT 60 Query: 61 IKVDGQTYKLANHGFARRSEFTIVEADESRAVFLLTSSGHTLSSYPFQFNLYITYTLNES 120 VDG Y L HGFAR F+I E E+ +++TS+ TL YP++F L+++Y L Sbjct: 61 YYVDGTAYSLTQHGFARDLPFSIKEQSETTITYIVTSNAETLQKYPYEFELFVSYELEGQ 120 Query: 121 TLKLEYRVENTDGQNIFFQLGTHPAFNCPLDENGSFSDYVLEFSENETLDREFLNSAGLR 180 TL + Y V N Q +FF +G HP FNCPL E+ SF+DY L F E L+ L G Sbjct: 121 TLHVTYNVHNPSSQEMFFSIGAHPGFNCPLVESTSFTDYYLAFRGPEYLETSILE--GPF 178 Query: 181 ISGRSEAVLSGERILPLTHEMFKDDALVFQNVASRTITLKSKLTEKSVAVSFEGFPDLGI 240 +S + ++ LPLT+++FK+DAL+F+N+ + I ++S K V V+F GFP +G+ Sbjct: 179 LSKEKQLIVDHASELPLTYDLFKNDALIFENMNTNEIAIRSHKHNKFVKVTFTGFPFVGV 238 Query: 241 WQK-PNAPFLCIEPWQGFADSDEFQGELSEKEGIVSLAPGDNFTSSLTIKI 290 W NAPFLCIEPW G AD + EK+GI SL + FT +I I Sbjct: 239 WTPGNNAPFLCIEPWYGIADEVNRAKDFKEKKGIQSLQANETFTCRYSITI 289 >B5V310.1 B5V310_BACCE Putative lacX protein Length = 290 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 173/291 (59%), Gaps = 3/291 (1%) Query: 1 MNTILRSGSARAEISSLGAELVSFTKNDTGTEYIWSGDAAYWTGRSPVLFPIIGAVRNGE 60 M +++ IS GAEL S + TEY+W GDA YW R+P+LFPI+G + + Sbjct: 1 MTATIQNEKVIVTISDKGAELQSVLLKEDNTEYLWQGDATYWGRRAPILFPIVGRLVDNT 60 Query: 61 IKVDGQTYKLANHGFARRSEFTIVEADESRAVFLLTSSGHTLSSYPFQFNLYITYTLNES 120 VDG+ Y L HGFAR F++ E E++ +++TS+ TL YP++F L ++Y L+E Sbjct: 61 YYVDGKPYSLTQHGFARDLTFSVEEQSETKITYIVTSNEETLKKYPYEFELLVSYELDEQ 120 Query: 121 TLKLEYRVENTDGQNIFFQLGTHPAFNCPLDENGSFSDYVLEFSENETLDREFLNSAGLR 180 T+ + Y V N + +FF +G HP FN PL E SF+DY L F+ +E L+ L G Sbjct: 121 TVHVTYEVNNPASKEMFFSIGAHPGFNFPLLEGESFTDYHLSFNGSERLETSVLE--GPY 178 Query: 181 ISGRSEAVLSGERILPLTHEMFKDDALVFQNVASRTITLKSKLTEKSVAVSFEGFPDLGI 240 +S + + + LPLT+++FK+DAL+F+N+ + I+++S K V V F+GFP +G+ Sbjct: 179 LSNKKQLIAESTNELPLTYDLFKNDALIFENMNTDEISIRSHKHNKFVKVEFDGFPFVGV 238 Query: 241 WQK-PNAPFLCIEPWQGFADSDEFQGELSEKEGIVSLAPGDNFTSSLTIKI 290 W NAPFLCIEPW G AD + EK+GI SL + FT +I I Sbjct: 239 WTPGENAPFLCIEPWYGIADEVNPAKDFKEKKGIQSLQANETFTCRYSITI 289 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,745,596,685 Number of extensions: 73249747 Number of successful extensions: 155886 Number of sequences better than 1.0e-05: 454 Number of HSP's gapped: 155090 Number of HSP's successfully gapped: 454 Length of query: 291 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 157 Effective length of database: 1,798,280,193 Effective search space: 282329990301 Effective search space used: 282329990301 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)