BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0126.0018.p (554 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K494.1 B3K494_9BACI Extracellular solute-binding protein family 1 689 0.0 B1D502.1 B1D502_9BACL Extracellular solute-binding protein family 1 620 e-175 A4XMJ0.1 A4XMJ0_CALS8 Extracellular solute-binding protein, fami... 575 e-162 A9KLB9.1 A9KLB9_CLOPH Extracellular solute-binding protein family 1 506 e-141 C0FZA4.1 C0FZA4_9FIRM Putative uncharacterized protein 377 e-102 >B3K494.1 B3K494_9BACI Extracellular solute-binding protein family 1 Length = 554 Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/488 (66%), Positives = 386/488 (79%) Query: 50 VNADEPGWKSSTKPITFDWYLNYSWFADKWGVDKTTQYITKKTGVNINFIVPAGNENEKM 109 + D+PGW+ T PITFDWY+N++WF +KWG D T+QY+TKKTGVN+NFIVPAGNE EKM Sbjct: 47 LTQDQPGWEVDTSPITFDWYINFAWFPNKWGEDITSQYVTKKTGVNVNFIVPAGNEAEKM 106 Query: 110 NTMIASNNLPDFITLDWNSDAIDKMVQGGLVLPLNELADQYDPYFFKVADPDKLKWYTEK 169 NTMIAS LPDFITL W DA+ KM++G LVLPLNELADQYDPYF+KV DP K+ WYT+ Sbjct: 107 NTMIASGTLPDFITLGWYEDAVKKMIEGDLVLPLNELADQYDPYFYKVTDPAKVSWYTKD 166 Query: 170 DGNVYGYPNQSSSPSNFKEYGDNFTSSNTFLVRKDIYEAIGKPDMRTPEGFLNALKAAKE 229 DGN+YGYPN SSSP +++++GDN TS+ TFLVRKD+YEA+G PDMRTPEGFL AL+ AK+ Sbjct: 167 DGNIYGYPNASSSPKDYEKFGDNITSNQTFLVRKDMYEALGSPDMRTPEGFLKALEDAKK 226 Query: 230 KFPEVNGQPLIPFGTQEFTDIGNGSFGTNLMDFLAIPYEKDGKLYDRSTDPEYIRWLKTF 289 FP+VNGQPLIPFG +F + GN S L +FLAIP +KDGKLYDRSTDPEY+RWLKTF Sbjct: 227 MFPDVNGQPLIPFGLHDFHEKGNSSLEGYLQNFLAIPQDKDGKLYDRSTDPEYVRWLKTF 286 Query: 290 REANDQGLIAKDIFIDKRPQMEEKIVQGRYFSMMFPRSDLQNQNITRYQQDPNSVYIAVD 349 R AN++GL++KDIF+DKRPQMEEKI QGRYF+M++ RSD+ NQ Y DPNSVYIAVD Sbjct: 287 RMANEKGLMSKDIFVDKRPQMEEKIAQGRYFAMLYQRSDMANQQNALYANDPNSVYIAVD 346 Query: 350 GPGNSKLDQPKLGGPSIAGWALTLISKKVKDKERAIDFLTYLISEEGNKDLFFGEKGVTY 409 GP NS LDQP L GPSI+GW +TLISK VKDK RAI FL YLISEEG +D + GEKGVT+ Sbjct: 347 GPANSNLDQPTLSGPSISGWTVTLISKNVKDKARAIRFLDYLISEEGQRDTYLGEKGVTW 406 Query: 410 DTIDGKDQFLPEVLNMYNNDRSGFAKTYGASYTFWMMMDPALNLKWAPASVEPIKQPEDW 469 DTIDGKDQFLPEV + N+DR F K YGAS+TFWMMMD + W PA+VEP KQ EDW Sbjct: 407 DTIDGKDQFLPEVAELLNSDRGAFDKKYGASHTFWMMMDNNVTQPWMPAAVEPFKQMEDW 466 Query: 470 TRGKVADNSVYANLDPAVSSPEGIALGKINTQWGKTLPKLILSKSEAEFDAAWNEFQQYR 529 TRGK S + LDP S EGI K+ ++WGK LPKLI +K++AEFD WN++Q R Sbjct: 467 TRGKTQSFSQFDQLDPDAGSEEGIINDKVMSEWGKILPKLIFAKTDAEFDQIWNDYQAKR 526 Query: 530 KDHDLDKI 537 + K+ Sbjct: 527 ESLGFAKV 534 >B1D502.1 B1D502_9BACL Extracellular solute-binding protein family 1 Length = 566 Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust. Identities = 298/509 (58%), Positives = 374/509 (73%), Gaps = 3/509 (0%) Query: 48 KTVNADEPGWKSSTKPITFDWYLNYSWFADKWGVDKTTQYITKKTGVNINFIVPAGNENE 107 K ++ DEP WK T PITFDWY+N+ WF KWG + + YITKKTGV++NFIVPAG+ E Sbjct: 53 KKISTDEPAWKLDTTPITFDWYINFDWFTSKWGGNAVSDYITKKTGVSLNFIVPAGDAGE 112 Query: 108 KMNTMIASNNLPDFITLDWNSDAIDKMVQGGLVLPLNELADQYDPYFFKVADPDKLKWYT 167 K+NTM+++ +LPDFITL W DA+ KM+ G +VLPLNELAD+YDPYFFKVADP KL WYT Sbjct: 113 KLNTMMSARSLPDFITLGWYEDAVQKMINGDMVLPLNELADEYDPYFFKVADPAKLSWYT 172 Query: 168 EKDGNVYGYPNQSSSPSNFKEYGDNFTSSNTFLVRKDIYEAIGKPDMRTPEGFLNALKAA 227 + +GNVYGYPN SSSP+++++YG FTS+ TF+VRKD+YEA+GKPDM TPEGFL ALKAA Sbjct: 173 QSNGNVYGYPNASSSPADYQKYGQLFTSNQTFVVRKDLYEALGKPDMSTPEGFLGALKAA 232 Query: 228 KEKFPEVNGQPLIPFGTQEFTDIGNGSFGTNLMDFLAIPYEKDGKLYDRSTDPEYIRWLK 287 KEKFPEV+GQPLIP G EFT+ GN S L +FLAIP +K+GKLYDR +DP Y++WLK Sbjct: 233 KEKFPEVDGQPLIPIGLHEFTETGNYSLDEYLQNFLAIPKQKNGKLYDRRSDPTYLKWLK 292 Query: 288 TFREANDQGLIAKDIFID-KRPQMEEKIVQGRYFSMMFPRSDLQNQNITRYQQDPNSVYI 346 FR+AN+ GL+ D++ID KR + +EKI QGRYF+M++ SD N YQ+DPN VYI Sbjct: 293 VFRQANEDGLMPTDVYIDEKRLEKDEKISQGRYFAMLYQWSDFTEINQMLYQKDPNKVYI 352 Query: 347 AVDGPGNSKLDQPKLGGPSIAGWALTLISKKVKDKERAIDFLTYLISEEGNKDLFFGEKG 406 A+DGP N D P L G I+GW +TLISK VKDK+RA+ FL+YL+SEEGNKDL+ GEKG Sbjct: 353 AIDGPANDAHDAPTLAGNGISGWTVTLISKNVKDKKRAMAFLSYLLSEEGNKDLYLGEKG 412 Query: 407 VTYDTIDGKDQFLPEVLNMYNNDRSGFAKTYGASYTFWMMMDPALNLKWAPA-SVEPIKQ 465 VTYDTIDGKDQFLP +N+ N +R F K YGASY +WM+MD +NL W EP KQ Sbjct: 413 VTYDTIDGKDQFLPAAMNLLNTNRQAFDKKYGASYMYWMLMDTNMNLAWMTGMDAEPAKQ 472 Query: 466 PEDWTRGKVADNSVYANLDPAVSSPEGIALGKINTQWGKTLPKLILSKSEAEFDAAWNEF 525 DWTRGK + + +LDP ++ EGIA G+ W +TLPKL++S S+AEFD + EF Sbjct: 473 IADWTRGKTISMAEFDSLDPDPTTKEGIAEGEQTRLWAETLPKLLMSGSDAEFDQLFTEF 532 Query: 526 -QQYRKDHDLDKIXXXXXXXXXXXXXKLK 553 KD + ++I KLK Sbjct: 533 LNTITKDPEYEEIAASRQAAYERNIEKLK 561 >A4XMJ0.1 A4XMJ0_CALS8 Extracellular solute-binding protein, family 1 Length = 535 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 280/485 (57%), Positives = 348/485 (71%), Gaps = 1/485 (0%) Query: 54 EPGWKS-STKPITFDWYLNYSWFADKWGVDKTTQYITKKTGVNINFIVPAGNENEKMNTM 112 +PGWK + KPITFDWY+N+SWF KWG + + Y+TKKTGV INFIVPAGNENEK+N M Sbjct: 33 KPGWKEDAKKPITFDWYINFSWFGTKWGGNAVSDYVTKKTGVKINFIVPAGNENEKLNVM 92 Query: 113 IASNNLPDFITLDWNSDAIDKMVQGGLVLPLNELADQYDPYFFKVADPDKLKWYTEKDGN 172 IASN LPDFITL W +A+ KM+ G LV L+ELA +YDPYFF VA+ +L WYT+ DG+ Sbjct: 93 IASNTLPDFITLGWWEEAVRKMIAGKLVYALDELAKKYDPYFFTVANKQRLGWYTQPDGH 152 Query: 173 VYGYPNQSSSPSNFKEYGDNFTSSNTFLVRKDIYEAIGKPDMRTPEGFLNALKAAKEKFP 232 VYGYPN S +P +FK S+ TFLVRKDIYEA+GKPDMR P+ FL AL AK+KFP Sbjct: 153 VYGYPNASYTPEDFKNPKLKIYSNQTFLVRKDIYEALGKPDMRKPDTFLKALADAKKKFP 212 Query: 233 EVNGQPLIPFGTQEFTDIGNGSFGTNLMDFLAIPYEKDGKLYDRSTDPEYIRWLKTFREA 292 VNGQPLIP G EFTD G S + L +FLA+P EK+GKLYD T+PEYIRWLKTF EA Sbjct: 213 TVNGQPLIPIGFHEFTDTGCYSLESYLWNFLALPREKNGKLYDIVTNPEYIRWLKTFNEA 272 Query: 293 NDQGLIAKDIFIDKRPQMEEKIVQGRYFSMMFPRSDLQNQNITRYQQDPNSVYIAVDGPG 352 +GLIAKD+F+DKR QMEEKI QGRYFSM++ R+D + Y+++P +YIAVDGP Sbjct: 273 YRRGLIAKDVFVDKRAQMEEKIAQGRYFSMIYQRTDFVSAQQELYKKNPKMIYIAVDGPA 332 Query: 353 NSKLDQPKLGGPSIAGWALTLISKKVKDKERAIDFLTYLISEEGNKDLFFGEKGVTYDTI 412 NSKL++PKL GP IAGW LT+ISK KD +RAI F++Y +S EG KD + G KGVT++ I Sbjct: 333 NSKLEKPKLAGPGIAGWTLTMISKNNKDPKRAIRFMSYWLSPEGQKDFYLGPKGVTWNVI 392 Query: 413 DGKDQFLPEVLNMYNNDRSGFAKTYGASYTFWMMMDPALNLKWAPASVEPIKQPEDWTRG 472 GK+QF PEV+ + DR F K YGA T+WM+ D +W P ++Q DWT G Sbjct: 393 KGKEQFKPEVVKLMQTDRPTFDKKYGAELTYWMLGDWPFVSQWDPGMPPYLQQMADWTVG 452 Query: 473 KVADNSVYANLDPAVSSPEGIALGKINTQWGKTLPKLILSKSEAEFDAAWNEFQQYRKDH 532 K + Y ++P SPEGI K+ +WG+ LPKLI++KS AEFD +NEFQ Y+K Sbjct: 453 KTVSYAQYDGIEPPADSPEGIIARKVALKWGQVLPKLIMAKSSAEFDKIFNEFQAYKKQI 512 Query: 533 DLDKI 537 DK+ Sbjct: 513 GYDKV 517 >A9KLB9.1 A9KLB9_CLOPH Extracellular solute-binding protein family 1 Length = 568 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 251/511 (49%), Positives = 345/511 (67%), Gaps = 10/511 (1%) Query: 35 KSANDTAGPSDGAKTVNADE-------PGWKS-STKPITFDWYLNYSWFADKWGVDKTTQ 86 K+ T G +G K D PGW++ ++ + WY+N+SWF WG + ++ Sbjct: 42 KAVVPTDGTKEGTKEGTKDNNNQGEVVPGWQTNASDKVDLTWYINFSWFTTPWGENLISK 101 Query: 87 YITKKTGVNINFIVPAGNENEKMNTMIASNNLPDFITLDWNSDAIDKMVQGGLVLPLNEL 146 IT++TG NINF+VPAGNE EK+N++IAS++LPD +T+ W +++M++ G+V L+EL Sbjct: 102 TITEETGCNINFVVPAGNEAEKLNSLIASDSLPDLLTIGWWEGQVNQMIEDGMVYALDEL 161 Query: 147 ADQYDPYFFKVADPDKLKWYTEKDGNVYGYPNQSSSPSNFKEYGDNFTSSNTFLVRKDIY 206 A +YDPY+F+VAD ++ W+T++DG+VYGYPN S SP ++++Y DN +S+ TFLVRKD+Y Sbjct: 162 ATKYDPYWFEVADKGRVGWFTKEDGHVYGYPNSSFSPQDYEKY-DNISSNQTFLVRKDMY 220 Query: 207 EAIGKPDMRTPEGFLNALKAAKEKFPEVNGQPLIPFGTQEFTDIGNGSFGTNLMDFLAIP 266 EAIG PDM TPEGF+ A+KAA K+PEVNGQP+IP G EF GN SF L +FLA P Sbjct: 221 EAIGSPDMTTPEGFIAAVKAAAAKYPEVNGQPIIPVGAHEFISTGNNSFDLYLSNFLATP 280 Query: 267 YEKDGKLYDRSTDPEYIRWLKTFREANDQGLIAKDIFIDKRPQMEEKIVQGRYFSMMFPR 326 YEKDGK YDR +DPE +RWLK FRE +G + +DIF+DKR QMEEKI QGRYF M++ R Sbjct: 281 YEKDGKYYDRYSDPELVRWLKAFRELGAEGYLKEDIFVDKRAQMEEKIAQGRYFCMLYQR 340 Query: 327 SDLQNQNITRYQQDPNSVYIAVDGPGNSKLDQPKLGGPSIAGWALTLISKKVKDKERAID 386 +DL +Q Y+ DPNS+YIA+DGP NSK D L G I GW +T+ISKK + +RAI Sbjct: 341 TDLADQEKVLYKNDPNSIYIAIDGPKNSKGDAYTLPGTGINGWCVTMISKKCQRPDRAIQ 400 Query: 387 FLTYLISEEGNKDLFFGEKGVTYDTIDGKDQFLPEVLNMYNNDRSGFAKTYGASYTFWMM 446 +YL+SE G + G +GVT+D ++GK+ PEV + DRS + K YGA +WM Sbjct: 401 LCSYLMSEHGQHMTWLGVEGVTWDYVNGKETMKPEVKEILTTDRSAYDKQYGADSCYWMF 460 Query: 447 MDPALNLKWAPASVEPIKQPEDWTRGKVADNSVYANLDPAVSSPEGIALGKINTQWGKTL 506 D A++LKWA + EP+ Q E WT V S Y ++ A S E ++ +WG L Sbjct: 461 QDNAMSLKWAVETPEPLGQMERWTFPYVISVSQY-DVSLAADSDEFDIQSNVDNEWGVVL 519 Query: 507 PKLILSKSEAEFDAAWNEFQQYRKDHDLDKI 537 P+L+L+K+EA+FD WN F Q +KD DK+ Sbjct: 520 PRLLLAKTEADFDTIWNAFIQKKKDFGFDKV 550 >C0FZA4.1 C0FZA4_9FIRM Putative uncharacterized protein Length = 421 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 191/394 (48%), Positives = 258/394 (65%), Gaps = 6/394 (1%) Query: 134 MVQGGLVLPLNELADQYDPYFFKVADPDKLKWYTEKDGNVYGYPNQSSSPSNFKEYGDNF 193 M++ +V LNELAD YD YF++V D D + WYT DGN+YGYP + +P KE+ D+ Sbjct: 1 MIEENMVYALNELADDYDAYFWQVTDADVVNWYTMDDGNIYGYPCSTVTPKQVKEH-DDI 59 Query: 194 TSSNTFLVRKDIYEAIGKPDMRTPEGFLNALKAAKEKFPEVNGQPLIPFGTQEFTDIGNG 253 S+ TFLVRKDIYEAIG PDM TPEGF A++ A E FPEVNG+ LIP G+ F + GN Sbjct: 60 ISNQTFLVRKDIYEAIGSPDMTTPEGFKAAVEKAAEMFPEVNGEKLIPVGSHVFDNQGNV 119 Query: 254 SFGTNLMDFLAIPYEKDGKLYDRSTDPEYIRWLKTFREANDQGLIAKDIFIDKRPQMEEK 313 SF LM+FLA+P+EKDGK YDR TDPEY+ WLK FRE ++GL+A DIF+D R QMEEK Sbjct: 120 SFDKYLMNFLAVPWEKDGKYYDRYTDPEYVIWLKMFRELGEEGLLANDIFVDTRIQMEEK 179 Query: 314 IVQGRYFSMMFPRSDLQNQNITRYQQDPNSVYIAVDGPGNSKLDQPKLGGPSIAGWALTL 373 + +GRYF M++ SD +Q Y+ DP+S+Y+AV+GP NS D P L ++ GW LTL Sbjct: 180 LAKGRYFCMLYQYSDTISQQKALYENDPDSIYMAVEGPRNSNGDDPTLPTNNMNGWTLTL 239 Query: 374 ISKKVKDKERAIDFLTYLISEEGNKDLFFGEKGVTYDTIDGKDQFLPEVLNMYNNDRSGF 433 ISK K ERAI F+ Y++SE G ++ G +GVTYD +DGK +V + N+DR + Sbjct: 240 ISKNCKYPERAIAFMDYMMSEHGQMLIYLGVEGVTYDIVDGKPVLKEDVSKILNSDRETY 299 Query: 434 AKTYGASYTFWMMMDPALNLKWAPASVEPIKQPEDWTRGKVADNSVYANLDPAVS-SPEG 492 + YGA +WM+ + + L+W + +Q W N Y D ++S SPE Sbjct: 300 DRLYGADDAYWMLQNNVMQLQWEQKAGPATEQLLVWACKYTVYNGQY---DVSLSTSPEI 356 Query: 493 IALGKINTQ-WGKTLPKLILSKSEAEFDAAWNEF 525 A+ + T+ W +TLPKL+L+ +EA+FD + EF Sbjct: 357 AAMDEKCTKLWSETLPKLLLASNEAQFDEIFEEF 390 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.134 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,481,775,187 Number of extensions: 159501627 Number of successful extensions: 262164 Number of sequences better than 1.0e-05: 159 Number of HSP's gapped: 261893 Number of HSP's successfully gapped: 159 Length of query: 554 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 413 Effective length of database: 1,732,333,088 Effective search space: 715453565344 Effective search space used: 715453565344 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)