BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0126.0008.p
         (158 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q2BBL4.1 Q2BBL4_9BACI Glyoxalase                                      234   1e-60
B1HSI3.1 B1HSI3_LYSSC Glyoxalase                                      229   5e-59
A3I582.1 A3I582_9BACI Glyoxalase                                      226   7e-58
A6CIL5.1 A6CIL5_9BACI Glyoxalase                                      221   2e-56
B1D936.1 B1D936_9BACL Glyoxalase/bleomycin resistance protein/di...   218   1e-55

>Q2BBL4.1 Q2BBL4_9BACI Glyoxalase
          Length = 160

 Score =  234 bits (598), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/149 (71%), Positives = 130/149 (87%), Gaps = 2/149 (1%)

Query: 12  KYNKGMILEV--KTQEEIMGRLVHFEIHVDDMERAKKFYGEVFGWTFEDWSEYAGMPYFG 69
           K +  ++LE+    +EEIMGRL+HFEIHVDD+ERAKKFYG VFGW+F+DWSEYAGMPYFG
Sbjct: 12  KDSSKLVLEIIIGNREEIMGRLIHFEIHVDDLERAKKFYGNVFGWSFQDWSEYAGMPYFG 71

Query: 70  ATTGDAGELGINGALMQRRGASPEPGQAMNGYACTMGVEDYDSTEAIILKLGGKLALPKY 129
           A TG+  E+GINGAL++R+   PEPGQ +NGY+CT+GV+DYDSTEA I++ GGK+ALPKY
Sbjct: 72  AVTGEDSEMGINGALIKRQSPPPEPGQPVNGYSCTLGVKDYDSTEAKIIEYGGKVALPKY 131

Query: 130 ALPGMAWQGYYLDTEGNTFGIHQPDKHAK 158
           ALPGMAWQGYY+DTEGN FGIHQPD+ AK
Sbjct: 132 ALPGMAWQGYYVDTEGNIFGIHQPDEGAK 160


>B1HSI3.1 B1HSI3_LYSSC Glyoxalase
          Length = 139

 Score =  229 bits (585), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 105/136 (77%), Positives = 119/136 (87%)

Query: 23  TQEEIMGRLVHFEIHVDDMERAKKFYGEVFGWTFEDWSEYAGMPYFGATTGDAGELGING 82
           T+E+ MGRLVHFEIHV DMERAK FYG VFGW+F+DWS+YAGMPYFGA TG   E GI+G
Sbjct: 4   TKEDTMGRLVHFEIHVSDMERAKNFYGNVFGWSFQDWSDYAGMPYFGAVTGGEDEHGIDG 63

Query: 83  ALMQRRGASPEPGQAMNGYACTMGVEDYDSTEAIILKLGGKLALPKYALPGMAWQGYYLD 142
           ALMQR+G  PEP QAMNG+ACTMGVE YD TEA IL+ GG++A+PKYALPGMAWQGYY+D
Sbjct: 64  ALMQRQGPPPEPNQAMNGFACTMGVESYDVTEASILENGGQVAMPKYALPGMAWQGYYMD 123

Query: 143 TEGNTFGIHQPDKHAK 158
           TEGN FGIHQPDK+AK
Sbjct: 124 TEGNVFGIHQPDKNAK 139


>A3I582.1 A3I582_9BACI Glyoxalase
          Length = 143

 Score =  226 bits (575), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 104/136 (76%), Positives = 118/136 (86%)

Query: 23  TQEEIMGRLVHFEIHVDDMERAKKFYGEVFGWTFEDWSEYAGMPYFGATTGDAGELGING 82
           ++E+ MGRLVHFEIHV DMERAK FYG VFGW+F+DWS+YAGMPYFGA TG   E GI+G
Sbjct: 8   SKEDTMGRLVHFEIHVSDMERAKNFYGNVFGWSFQDWSDYAGMPYFGAVTGVEDEHGIDG 67

Query: 83  ALMQRRGASPEPGQAMNGYACTMGVEDYDSTEAIILKLGGKLALPKYALPGMAWQGYYLD 142
           ALMQR+G  PEP QAMNG+ACTMGVE YD TEA IL+ GG++A+PKYALPGMAWQGYY D
Sbjct: 68  ALMQRQGPPPEPNQAMNGFACTMGVESYDITEAKILENGGQVAMPKYALPGMAWQGYYKD 127

Query: 143 TEGNTFGIHQPDKHAK 158
           TEGN FGIHQPDK+AK
Sbjct: 128 TEGNIFGIHQPDKNAK 143


>A6CIL5.1 A6CIL5_9BACI Glyoxalase
          Length = 131

 Score =  221 bits (563), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/131 (79%), Positives = 112/131 (85%)

Query: 28  MGRLVHFEIHVDDMERAKKFYGEVFGWTFEDWSEYAGMPYFGATTGDAGELGINGALMQR 87
           MGR+VHFE+HVDDMERA KFYGEVFGWTFEDWSE+AGMPY GA  G   + GINGALMQR
Sbjct: 1   MGRIVHFEVHVDDMERAVKFYGEVFGWTFEDWSEFAGMPYMGAVRGGEDQPGINGALMQR 60

Query: 88  RGASPEPGQAMNGYACTMGVEDYDSTEAIILKLGGKLALPKYALPGMAWQGYYLDTEGNT 147
           +G  PE GQ MNGYACTMGVEDYDSTE  IL  GG +ALPKYALPGMAWQGYY DTEGN 
Sbjct: 61  QGPPPEAGQPMNGYACTMGVEDYDSTEEKILASGGTVALPKYALPGMAWQGYYKDTEGNI 120

Query: 148 FGIHQPDKHAK 158
           FGIHQPD++AK
Sbjct: 121 FGIHQPDENAK 131


>B1D936.1 B1D936_9BACL Glyoxalase/bleomycin resistance protein/dioxygenase
          Length = 131

 Score =  218 bits (556), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/131 (80%), Positives = 120/131 (91%)

Query: 28  MGRLVHFEIHVDDMERAKKFYGEVFGWTFEDWSEYAGMPYFGATTGDAGELGINGALMQR 87
           MGR+VHFE+HVDDMERAKKFYGEVFGWTFEDWSEYAGMPY GATTGDA  +GINGAL++R
Sbjct: 1   MGRVVHFEVHVDDMERAKKFYGEVFGWTFEDWSEYAGMPYLGATTGDANAMGINGALIKR 60

Query: 88  RGASPEPGQAMNGYACTMGVEDYDSTEAIILKLGGKLALPKYALPGMAWQGYYLDTEGNT 147
            G  P+PGQ ++G+ACTMGVEDYD+TEA IL LGG++ALPKYALPGMAWQGYY+DTEGN 
Sbjct: 61  MGPPPQPGQPVSGFACTMGVEDYDATEAKILSLGGQVALPKYALPGMAWQGYYIDTEGNV 120

Query: 148 FGIHQPDKHAK 158
            GIHQPD++AK
Sbjct: 121 IGIHQPDENAK 131


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,090,721,744
Number of extensions: 46588834
Number of successful extensions: 105585
Number of sequences better than 1.0e-05: 114
Number of HSP's gapped: 105692
Number of HSP's successfully gapped: 114
Length of query: 158
Length of database: 3,060,696,203
Length adjustment: 119
Effective length of query: 39
Effective length of database: 1,939,595,418
Effective search space: 75644221302
Effective search space used: 75644221302
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)