BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0124.0021.p (388 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7B2.1 B3K7B2_9BACI Peptidase S1 and S6 chymotrypsin/Hap 403 e-110 B1DE70.1 B1DE70_9BACL Peptidase S1 and S6 chymotrypsin/Hap 350 9e-95 C0ZKX6.1 C0ZKX6_BREBN Putative uncharacterized protein 329 3e-88 B8I2S7.1 B8I2S7_CLOCE Peptidase S1 and S6 chymotrypsin/Hap 254 1e-65 B8I3E3.1 B8I3E3_CLOCE Peptidase S1 and S6 chymotrypsin/Hap 241 1e-61 >B3K7B2.1 B3K7B2_9BACI Peptidase S1 and S6 chymotrypsin/Hap Length = 358 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 206/307 (67%), Positives = 242/307 (78%), Gaps = 4/307 (1%) Query: 61 KNTAVTADAVPQIIKAVSPSVVGIIGKFTGDPGSGP-DDRYNLTHGSGIIVKADGWIITN 119 KNT + VPQ+I +SPSVVGIIGK GSG DDRYNL HG+G+I K+DGWI+TN Sbjct: 41 KNT-YEQNEVPQVISRMSPSVVGIIGKAA--QGSGEVDDRYNLAHGTGVIWKSDGWIVTN 97 Query: 120 AHVIKGLKNAVVVTSDAKSYNITASYLDEVSDLALVKINAKFLKPARFANAADKIQVGEK 179 AHV+ GL VVT+D KSY Y D SD+ALVKINAK LKPA+FA A VGE Sbjct: 98 AHVVDGLTGITVVTADGKSYKAKGVYSDPKSDIALVKINAKSLKPAKFAATAQHALVGET 157 Query: 180 VIAIGTPISFSLRNSATVGVVSGLNRAVDAAYRLIQSDTAINPGNSGGPLVSMKGEVLGV 239 V+AIGTPISFSLRNSA+VGVVSGLNR+VD +YRLIQ+DTAINPGNSGGPLV++ GEV+G+ Sbjct: 158 VVAIGTPISFSLRNSASVGVVSGLNRSVDGSYRLIQTDTAINPGNSGGPLVNLNGEVIGI 217 Query: 240 NSLKYAAVGVENMGFSIPADTVQYIMNQLFQYGEVKRPSLGLELEESWSAIVGLPAQDPL 299 NS K+AAVG+ENMGFSIPA+TV+Y++ L +YGEV R LGLELEESWSAIVGLP+ DPL Sbjct: 218 NSKKFAAVGIENMGFSIPAETVRYVVGHLLKYGEVIRAGLGLELEESWSAIVGLPSDDPL 277 Query: 300 TVTKVVSAEAEKAGIAAGDVLYAIDGHRVASLVDINEWFKGYKPGTAVKLLMQHDGDIVT 359 TVTKV+S +A++AGI DVLYAI+G R+ S+VDINE K Y PG V+LLMQ DGDIV Sbjct: 278 TVTKVLSEQAKQAGIQEDDVLYAINGKRIYSVVDINERLKPYIPGQRVQLLMQRDGDIVN 337 Query: 360 RKLVLGQ 366 KL L Q Sbjct: 338 VKLTLSQ 344 >B1DE70.1 B1DE70_9BACL Peptidase S1 and S6 chymotrypsin/Hap Length = 371 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 170/282 (60%), Positives = 216/282 (76%), Gaps = 4/282 (1%) Query: 83 GIIGKFTGDPGSGPDDRYNLTHGSGIIVKADGWIITNAHVIKGLKNAVVVTSDAKSYNIT 142 GIIGK P G D RY L HG+G+I+KADGWI+TNAHV+K L N VVT+D K Y+ Sbjct: 91 GIIGK----PADGGDQRYVLAHGTGVIMKADGWILTNAHVVKDLTNITVVTADGKQYSGK 146 Query: 143 ASYLDEVSDLALVKINAKFLKPARFANAADKIQVGEKVIAIGTPISFSLRNSATVGVVSG 202 S +DEVSDLALVKINA L A+FA + + +VGE VIAIGTP+SFSLRN+AT GV+SG Sbjct: 147 RSNVDEVSDLALVKINATKLPVAKFAASPLQAKVGETVIAIGTPVSFSLRNTATTGVLSG 206 Query: 203 LNRAVDAAYRLIQSDTAINPGNSGGPLVSMKGEVLGVNSLKYAAVGVENMGFSIPADTVQ 262 +NR+V + YRL+Q+D AINPGNSGGPLV+MKGEV+G+NS+K+ G++NMGFSIP DTV Sbjct: 207 MNRSVSSYYRLLQTDAAINPGNSGGPLVNMKGEVIGINSMKFVDEGIDNMGFSIPVDTVS 266 Query: 263 YIMNQLFQYGEVKRPSLGLELEESWSAIVGLPAQDPLTVTKVVSAEAEKAGIAAGDVLYA 322 Y+ F+YG VKR SLG+ LEES++AIVGLP D LTVT + S A+K GI GDVLY+ Sbjct: 267 YVTGHFFKYGYVKRSSLGIGLEESYAAIVGLPTDDGLTVTSIKSDSAKKLGIQVGDVLYS 326 Query: 323 IDGHRVASLVDINEWFKGYKPGTAVKLLMQHDGDIVTRKLVL 364 + GH+++S+V++NE K Y PG +++ M DGD+VTRKL L Sbjct: 327 VAGHQISSIVEVNELLKSYLPGQQIEVTMMMDGDLVTRKLTL 368 >C0ZKX6.1 C0ZKX6_BREBN Putative uncharacterized protein Length = 344 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 215/280 (76%), Gaps = 3/280 (1%) Query: 84 IIGKFTGDPGSGPDDRYNLTHGSGIIVKADGWIITNAHVIKGLKNAVVVTSDAKSYNITA 143 I+GK G+ S D+R+NL HG+G+IVKADGWI+TNAHV+K ++N V+T D K Y T Sbjct: 61 IVGKPEGNE-SVRDNRFNLAHGTGVIVKADGWILTNAHVVKDMRNLTVITVDGKQYGGTV 119 Query: 144 SYLDEVSDLALVKINAKFLKPARFANAADKIQVGEKVIAIGTPISFSLRNSATVGVVSGL 203 + +DE SDLALVKI A L+PA+FA+ I+VGE VIAIGTPIS SLRNSAT+G++SG Sbjct: 120 TNMDEESDLALVKIQATGLQPAKFASNY-AIRVGEPVIAIGTPISVSLRNSATLGIISGA 178 Query: 204 NRAVDAAYRLIQSDTAINPGNSGGPLVSMKGEVLGVNSLKYAAVGVENMGFSIPADTVQY 263 NR+V + YRLIQ+D +INPGNSGGPLV++KGEV+G+NS+K+ +VG++N+ F+IPADT QY Sbjct: 179 NRSVSSTYRLIQTDASINPGNSGGPLVNVKGEVVGINSMKFVSVGIDNLSFAIPADTAQY 238 Query: 264 IMNQLFQYGEVKRPSLGLELEESWSAIVGLPAQDPLTVTKVV-SAEAEKAGIAAGDVLYA 322 +MN F YG+V RP G ELEESW+A+VGLP ++PL +T++ + A KAG GDV+Y+ Sbjct: 239 VMNHFFTYGKVNRPYWGAELEESWAAVVGLPTKEPLRITRIEPGSPAAKAGFQVGDVIYS 298 Query: 323 IDGHRVASLVDINEWFKGYKPGTAVKLLMQHDGDIVTRKL 362 I+ ++LV+ NE K Y PG V+L++Q GD+V RK+ Sbjct: 299 INQAPFSTLVEFNELLKKYLPGQTVELMVQSGGDMVKRKV 338 >B8I2S7.1 B8I2S7_CLOCE Peptidase S1 and S6 chymotrypsin/Hap Length = 374 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 206/320 (64%), Gaps = 14/320 (4%) Query: 50 SQVXXXXXISKKNTAVTADAVPQIIKAVSPSVVGIIGKFTGDPGSGPDDRYNLTHGSGII 109 S+ IS KN D +P IIK++SPSVVGIIG D G+ D + G+G+I Sbjct: 64 SKTSNSINISTKND----DIIPNIIKSISPSVVGIIGNI--DSGNSTAD--GVVLGTGVI 115 Query: 110 VKADGWIITNAHVIKGLKNAVVVTSDAKSYNITASYLDEVSDLALVKINAKFLKPARFAN 169 +K+ G I+TNAHV++ + +VV +D Y Y+D+ SDLA++KI+ L A Sbjct: 116 IKSGGDILTNAHVVENMSRIIVVLNDGTGYEARIKYIDKPSDLAVIKIDRIGLTAATLGK 175 Query: 170 AADKIQVGEKVIAIGTPISFSLRNSATVGVVSGLNRAVDA--AYRLIQSDTAINPGNSGG 227 D I +G+ IAIGTP+SF RNSA+VGV+SGLNR+VD Y+LIQ+D AINPGNSGG Sbjct: 176 MQD-IVIGKTAIAIGTPMSFQNRNSASVGVISGLNRSVDGFYQYKLIQTDAAINPGNSGG 234 Query: 228 PLVSMKGEVLGVNSLKYAAVGVENMGFSIPADTVQYIMNQLFQYGEVKRPSLGLELEESW 287 PL++ KGEV+G+NS+ V + + ++IP DTVQY++N ++YG+VKR +LG + EE + Sbjct: 235 PLLTTKGEVIGINSM--TTVNAQGLSYAIPIDTVQYVLNHFYKYGKVKRVTLGADFEEDY 292 Query: 288 SAIVGLPAQDPLTVTKVVSAEA-EKAGIAAGDVLYAIDGHRVASLVDINEWFKGYKPGTA 346 A+ GLP+++ L +T + EK G+ D +Y+I+G V +LVD+NE +K PG Sbjct: 293 VALYGLPSKNGLKITSIKKGSCSEKYGLKKDDFIYSINGVYVNTLVDLNEAYKSVLPGNK 352 Query: 347 VKLLMQHDGDIVTRKLVLGQ 366 VK+ ++ +G + +V+ + Sbjct: 353 VKVGVRRNGKTQSINVVMDE 372 >B8I3E3.1 B8I3E3_CLOCE Peptidase S1 and S6 chymotrypsin/Hap Length = 377 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 125/286 (43%), Positives = 185/286 (64%), Gaps = 3/286 (1%) Query: 83 GIIGKFTGDPGSGPDDRYNLTHGSGIIVKADGWIITNAHVIKGLKNAVVVTSDAKSYNIT 142 GIIGK + N+ G+G+I ++ G+IITNAHV+K +++ VVV S++K+Y Sbjct: 92 GIIGKLKESSYEYDETSDNIIFGTGVIYRSSGYIITNAHVVKDMESIVVVLSNSKAYKAR 151 Query: 143 ASYLDEVSDLALVKINAKFLKPARFANAADKIQVGEKVIAIGTPISFSLRNSATVGVVSG 202 +DE DLA +KI+ L+PA+F + + ++ VG++V+AIGTP+SF LRNSAT G++SG Sbjct: 152 LKAIDEDLDLAEIKIDKGGLQPAKFGDIS-QVAVGDEVVAIGTPLSFGLRNSATRGIISG 210 Query: 203 LNRAVDAAYRLIQSDTAINPGNSGGPLVSMKGEVLGVNSLKYAAVGVENMGFSIPADTVQ 262 +NR+ + YR IQ+D AIN GNSGGPLV+MKGEV+G+NS YA +GV+ M FSIP D+V+ Sbjct: 211 MNRSENRQYRFIQTDAAINSGNSGGPLVNMKGEVVGINSWVYAGIGVQGMSFSIPIDSVR 270 Query: 263 YIMNQLFQYGEVKRPSLGLELEESWSAIVGLPAQDPLTVTKVVS--AEAEKAGIAAGDVL 320 Y +NQ ++G+++RP LGL +S ++I GLP K + + A+K I D L Sbjct: 271 YAINQFEKFGKIRRPYLGLAFSDSITSIYGLPNTVSGVTVKSIEKGSPAQKYNIKVDDRL 330 Query: 321 YAIDGHRVASLVDINEWFKGYKPGTAVKLLMQHDGDIVTRKLVLGQ 366 +I+G +V S D NE K Y PG + +Q D + + G+ Sbjct: 331 ISINGIKVNSTTDYNEEMKKYLPGDIAEFKLQRDNREFSISVTFGE 376 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,108,875,408 Number of extensions: 87731756 Number of successful extensions: 195828 Number of sequences better than 1.0e-05: 3642 Number of HSP's gapped: 184521 Number of HSP's successfully gapped: 3674 Length of query: 388 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 250 Effective length of database: 1,760,596,133 Effective search space: 440149033250 Effective search space used: 440149033250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 132 (55.5 bits)