BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0012.p (565 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K494.1 B3K494_9BACI Extracellular solute-binding protein family 1 752 0.0 B1D502.1 B1D502_9BACL Extracellular solute-binding protein family 1 659 0.0 A4XMJ0.1 A4XMJ0_CALS8 Extracellular solute-binding protein, fami... 607 e-171 A9KLB9.1 A9KLB9_CLOPH Extracellular solute-binding protein family 1 517 e-144 C0FZA4.1 C0FZA4_9FIRM Putative uncharacterized protein 390 e-106 >B3K494.1 B3K494_9BACI Extracellular solute-binding protein family 1 Length = 554 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/503 (68%), Positives = 425/503 (84%) Query: 61 VSADEPGWKSDTSPITFDWYLNFAWFPNKWGVDPTSQYITKKTGVNINFIVPAGNENEKL 120 ++ D+PGW+ DTSPITFDWY+NFAWFPNKWG D TSQY+TKKTGVN+NFIVPAGNE EK+ Sbjct: 47 LTQDQPGWEVDTSPITFDWYINFAWFPNKWGEDITSQYVTKKTGVNVNFIVPAGNEAEKM 106 Query: 121 NTLIASGKLPDFITLGFWEDAIKKMIEGELVLPLNKLAEEYDPYFFKVSDADKLGWYTQP 180 NT+IASG LPDFITLG++EDA+KKMIEG+LVLPLN+LA++YDPYF+KV+D K+ WYT+ Sbjct: 107 NTMIASGTLPDFITLGWYEDAVKKMIEGDLVLPLNELADQYDPYFYKVTDPAKVSWYTKD 166 Query: 181 DGNVYGYPNSSSSPADYKKYGDNYVSNQTFVVRKDIYEAIGSPDMRTPEGFLNALKMAKE 240 DGN+YGYPN+SSSP DY+K+GDN SNQTF+VRKD+YEA+GSPDMRTPEGFL AL+ AK+ Sbjct: 167 DGNIYGYPNASSSPKDYEKFGDNITSNQTFLVRKDMYEALGSPDMRTPEGFLKALEDAKK 226 Query: 241 KYPEINGQPIIPLGLHEFTENGNDSLEGYIQNFLNIPWEKDGKVYDRETDPEYVRWMKTL 300 +P++NGQP+IP GLH+F E GN SLEGY+QNFL IP +KDGK+YDR TDPEYVRW+KT Sbjct: 227 MFPDVNGQPLIPFGLHDFHEKGNSSLEGYLQNFLAIPQDKDGKLYDRSTDPEYVRWLKTF 286 Query: 301 RQANQDGLLAKDIFIDKRAQMEEKIAQGRYFAMLYQRTDFASQLGTIFQKNPEQTYIAID 360 R AN+ GL++KDIF+DKR QMEEKIAQGRYFAMLYQR+D A+Q ++ +P YIA+D Sbjct: 287 RMANEKGLMSKDIFVDKRPQMEEKIAQGRYFAMLYQRSDMANQQNALYANDPNSVYIAVD 346 Query: 361 GPANTKLDPPALNGPSIAGWTVTLISKDVKDKARAIKFLSYLNSEEGNKDLYLGEKGVSY 420 GPAN+ LD P L+GPSI+GWTVTLISK+VKDKARAI+FL YL SEEG +D YLGEKGV++ Sbjct: 347 GPANSNLDQPTLSGPSISGWTVTLISKNVKDKARAIRFLDYLISEEGQRDTYLGEKGVTW 406 Query: 421 DTIDGKDQFLPEAFDLMNKDRSAFDKKYGSAFTFWMLQNTNITDQWAPKSVEPFKQLEDW 480 DTIDGKDQFLPE +L+N DR AFDKKYG++ TFWM+ + N+T W P +VEPFKQ+EDW Sbjct: 407 DTIDGKDQFLPEVAELLNSDRGAFDKKYGASHTFWMMMDNNVTQPWMPAAVEPFKQMEDW 466 Query: 481 TRGKTKNTSEFQQIDPTGNSPEGIIATKLKNLRGKTLPKLLMASSDAEFDKLWSDYLAKK 540 TRGKT++ S+F Q+DP S EGII K+ + GK LPKL+ A +DAEFD++W+DY AK+ Sbjct: 467 TRGKTQSFSQFDQLDPDAGSEEGIINDKVMSEWGKILPKLIFAKTDAEFDQIWNDYQAKR 526 Query: 541 EKEGQATFDAYRQTKYEENKKKL 563 E G A YRQ +YEEN KKL Sbjct: 527 ESLGFAKVQEYRQKEYEENVKKL 549 >B1D502.1 B1D502_9BACL Extracellular solute-binding protein family 1 Length = 566 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/506 (62%), Positives = 398/506 (78%), Gaps = 3/506 (0%) Query: 61 VSADEPGWKSDTSPITFDWYLNFAWFPNKWGVDPTSQYITKKTGVNINFIVPAGNENEKL 120 +S DEP WK DT+PITFDWY+NF WF +KWG + S YITKKTGV++NFIVPAG+ EKL Sbjct: 55 ISTDEPAWKLDTTPITFDWYINFDWFTSKWGGNAVSDYITKKTGVSLNFIVPAGDAGEKL 114 Query: 121 NTLIASGKLPDFITLGFWEDAIKKMIEGELVLPLNKLAEEYDPYFFKVSDADKLGWYTQP 180 NT++++ LPDFITLG++EDA++KMI G++VLPLN+LA+EYDPYFFKV+D KL WYTQ Sbjct: 115 NTMMSARSLPDFITLGWYEDAVQKMINGDMVLPLNELADEYDPYFFKVADPAKLSWYTQS 174 Query: 181 DGNVYGYPNSSSSPADYKKYGDNYVSNQTFVVRKDIYEAIGSPDMRTPEGFLNALKMAKE 240 +GNVYGYPN+SSSPADY+KYG + SNQTFVVRKD+YEA+G PDM TPEGFL ALK AKE Sbjct: 175 NGNVYGYPNASSSPADYQKYGQLFTSNQTFVVRKDLYEALGKPDMSTPEGFLGALKAAKE 234 Query: 241 KYPEINGQPIIPLGLHEFTENGNDSLEGYIQNFLNIPWEKDGKVYDRETDPEYVRWMKTL 300 K+PE++GQP+IP+GLHEFTE GN SL+ Y+QNFL IP +K+GK+YDR +DP Y++W+K Sbjct: 235 KFPEVDGQPLIPIGLHEFTETGNYSLDEYLQNFLAIPKQKNGKLYDRRSDPTYLKWLKVF 294 Query: 301 RQANQDGLLAKDIFID-KRAQMEEKIAQGRYFAMLYQRTDFASQLGTIFQKNPEQTYIAI 359 RQAN+DGL+ D++ID KR + +EKI+QGRYFAMLYQ +DF ++QK+P + YIAI Sbjct: 295 RQANEDGLMPTDVYIDEKRLEKDEKISQGRYFAMLYQWSDFTEINQMLYQKDPNKVYIAI 354 Query: 360 DGPANTKLDPPALNGPSIAGWTVTLISKDVKDKARAIKFLSYLNSEEGNKDLYLGEKGVS 419 DGPAN D P L G I+GWTVTLISK+VKDK RA+ FLSYL SEEGNKDLYLGEKGV+ Sbjct: 355 DGPANDAHDAPTLAGNGISGWTVTLISKNVKDKKRAMAFLSYLLSEEGNKDLYLGEKGVT 414 Query: 420 YDTIDGKDQFLPEAFDLMNKDRSAFDKKYGSAFTFWMLQNTNITDQWAP-KSVEPFKQLE 478 YDTIDGKDQFLP A +L+N +R AFDKKYG+++ +WML +TN+ W EP KQ+ Sbjct: 415 YDTIDGKDQFLPAAMNLLNTNRQAFDKKYGASYMYWMLMDTNMNLAWMTGMDAEPAKQIA 474 Query: 479 DWTRGKTKNTSEFQQIDPTGNSPEGIIATKLKNLRGKTLPKLLMASSDAEFDKLWSDYLA 538 DWTRGKT + +EF +DP + EGI + L +TLPKLLM+ SDAEFD+L++++L Sbjct: 475 DWTRGKTISMAEFDSLDPDPTTKEGIAEGEQTRLWAETLPKLLMSGSDAEFDQLFTEFLN 534 Query: 539 KKEKEGQ-ATFDAYRQTKYEENKKKL 563 K+ + A RQ YE N +KL Sbjct: 535 TITKDPEYEEIAASRQAAYERNIEKL 560 >A4XMJ0.1 A4XMJ0_CALS8 Extracellular solute-binding protein, family 1 Length = 535 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 290/496 (58%), Positives = 374/496 (75%), Gaps = 1/496 (0%) Query: 59 SAVSADEPGWKSDTS-PITFDWYLNFAWFPNKWGVDPTSQYITKKTGVNINFIVPAGNEN 117 +A S+ +PGWK D PITFDWY+NF+WF KWG + S Y+TKKTGV INFIVPAGNEN Sbjct: 27 NAASSVKPGWKEDAKKPITFDWYINFSWFGTKWGGNAVSDYVTKKTGVKINFIVPAGNEN 86 Query: 118 EKLNTLIASGKLPDFITLGFWEDAIKKMIEGELVLPLNKLAEEYDPYFFKVSDADKLGWY 177 EKLN +IAS LPDFITLG+WE+A++KMI G+LV L++LA++YDPYFF V++ +LGWY Sbjct: 87 EKLNVMIASNTLPDFITLGWWEEAVRKMIAGKLVYALDELAKKYDPYFFTVANKQRLGWY 146 Query: 178 TQPDGNVYGYPNSSSSPADYKKYGDNYVSNQTFVVRKDIYEAIGSPDMRTPEGFLNALKM 237 TQPDG+VYGYPN+S +P D+K SNQTF+VRKDIYEA+G PDMR P+ FL AL Sbjct: 147 TQPDGHVYGYPNASYTPEDFKNPKLKIYSNQTFLVRKDIYEALGKPDMRKPDTFLKALAD 206 Query: 238 AKEKYPEINGQPIIPLGLHEFTENGNDSLEGYIQNFLNIPWEKDGKVYDRETDPEYVRWM 297 AK+K+P +NGQP+IP+G HEFT+ G SLE Y+ NFL +P EK+GK+YD T+PEY+RW+ Sbjct: 207 AKKKFPTVNGQPLIPIGFHEFTDTGCYSLESYLWNFLALPREKNGKLYDIVTNPEYIRWL 266 Query: 298 KTLRQANQDGLLAKDIFIDKRAQMEEKIAQGRYFAMLYQRTDFASQLGTIFQKNPEQTYI 357 KT +A + GL+AKD+F+DKRAQMEEKIAQGRYF+M+YQRTDF S +++KNP+ YI Sbjct: 267 KTFNEAYRRGLIAKDVFVDKRAQMEEKIAQGRYFSMIYQRTDFVSAQQELYKKNPKMIYI 326 Query: 358 AIDGPANTKLDPPALNGPSIAGWTVTLISKDVKDKARAIKFLSYLNSEEGNKDLYLGEKG 417 A+DGPAN+KL+ P L GP IAGWT+T+ISK+ KD RAI+F+SY S EG KD YLG KG Sbjct: 327 AVDGPANSKLEKPKLAGPGIAGWTLTMISKNNKDPKRAIRFMSYWLSPEGQKDFYLGPKG 386 Query: 418 VSYDTIDGKDQFLPEAFDLMNKDRSAFDKKYGSAFTFWMLQNTNITDQWAPKSVEPFKQL 477 V+++ I GK+QF PE LM DR FDKKYG+ T+WML + QW P +Q+ Sbjct: 387 VTWNVIKGKEQFKPEVVKLMQTDRPTFDKKYGAELTYWMLGDWPFVSQWDPGMPPYLQQM 446 Query: 478 EDWTRGKTKNTSEFQQIDPTGNSPEGIIATKLKNLRGKTLPKLLMASSDAEFDKLWSDYL 537 DWT GKT + +++ I+P +SPEGIIA K+ G+ LPKL+MA S AEFDK+++++ Sbjct: 447 ADWTVGKTVSYAQYDGIEPPADSPEGIIARKVALKWGQVLPKLIMAKSSAEFDKIFNEFQ 506 Query: 538 AKKEKEGQATFDAYRQ 553 A K++ G AY Q Sbjct: 507 AYKKQIGYDKVLAYEQ 522 >A9KLB9.1 A9KLB9_CLOPH Extracellular solute-binding protein family 1 Length = 568 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 258/504 (51%), Positives = 351/504 (69%), Gaps = 9/504 (1%) Query: 66 PGWKSDTS-PITFDWYLNFAWFPNKWGVDPTSQYITKKTGVNINFIVPAGNENEKLNTLI 124 PGW+++ S + WY+NF+WF WG + S+ IT++TG NINF+VPAGNE EKLN+LI Sbjct: 69 PGWQTNASDKVDLTWYINFSWFTTPWGENLISKTITEETGCNINFVVPAGNEAEKLNSLI 128 Query: 125 ASGKLPDFITLGFWEDAIKKMIEGELVLPLNKLAEEYDPYFFKVSDADKLGWYTQPDGNV 184 AS LPD +T+G+WE + +MIE +V L++LA +YDPY+F+V+D ++GW+T+ DG+V Sbjct: 129 ASDSLPDLLTIGWWEGQVNQMIEDGMVYALDELATKYDPYWFEVADKGRVGWFTKEDGHV 188 Query: 185 YGYPNSSSSPADYKKYGDNYVSNQTFVVRKDIYEAIGSPDMRTPEGFLNALKMAKEKYPE 244 YGYPNSS SP DY+KY DN SNQTF+VRKD+YEAIGSPDM TPEGF+ A+K A KYPE Sbjct: 189 YGYPNSSFSPQDYEKY-DNISSNQTFLVRKDMYEAIGSPDMTTPEGFIAAVKAAAAKYPE 247 Query: 245 INGQPIIPLGLHEFTENGNDSLEGYIQNFLNIPWEKDGKVYDRETDPEYVRWMKTLRQAN 304 +NGQPIIP+G HEF GN+S + Y+ NFL P+EKDGK YDR +DPE VRW+K R+ Sbjct: 248 VNGQPIIPVGAHEFISTGNNSFDLYLSNFLATPYEKDGKYYDRYSDPELVRWLKAFRELG 307 Query: 305 QDGLLAKDIFIDKRAQMEEKIAQGRYFAMLYQRTDFASQLGTIFQKNPEQTYIAIDGPAN 364 +G L +DIF+DKRAQMEEKIAQGRYF MLYQRTD A Q +++ +P YIAIDGP N Sbjct: 308 AEGYLKEDIFVDKRAQMEEKIAQGRYFCMLYQRTDLADQEKVLYKNDPNSIYIAIDGPKN 367 Query: 365 TKLDPPALNGPSIAGWTVTLISKDVKDKARAIKFLSYLNSEEGNKDLYLGEKGVSYDTID 424 +K D L G I GW VT+ISK + RAI+ SYL SE G +LG +GV++D ++ Sbjct: 368 SKGDAYTLPGTGINGWCVTMISKKCQRPDRAIQLCSYLMSEHGQHMTWLGVEGVTWDYVN 427 Query: 425 GKDQFLPEAFDLMNKDRSAFDKKYGSAFTFWMLQNTNITDQWAPKSVEPFKQLEDWTRGK 484 GK+ PE +++ DRSA+DK+YG+ +WM Q+ ++ +WA ++ EP Q+E WT Sbjct: 428 GKETMKPEVKEILTTDRSAYDKQYGADSCYWMFQDNAMSLKWAVETPEPLGQMERWTFPY 487 Query: 485 TKNTSEFQQIDPTGNSPEGIIATKLKNLRGKTLPKLLMASSDAEFDKLWSDYLAKKEKEG 544 + S++ + +S E I + + N G LP+LL+A ++A+FD +W+ ++ KK+ G Sbjct: 488 VISVSQY-DVSLAADSDEFDIQSNVDNEWGVVLPRLLLAKTEADFDTIWNAFIQKKKDFG 546 Query: 545 QATFDAYRQTKYE---ENKKKLGM 565 FD TK E E K KLG+ Sbjct: 547 ---FDKVLATKTEMMKEAKVKLGV 567 >C0FZA4.1 C0FZA4_9FIRM Putative uncharacterized protein Length = 421 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 193/422 (45%), Positives = 275/422 (65%), Gaps = 4/422 (0%) Query: 145 MIEGELVLPLNKLAEEYDPYFFKVSDADKLGWYTQPDGNVYGYPNSSSSPADYKKYGDNY 204 MIE +V LN+LA++YD YF++V+DAD + WYT DGN+YGYP S+ +P K++ D+ Sbjct: 1 MIEENMVYALNELADDYDAYFWQVTDADVVNWYTMDDGNIYGYPCSTVTPKQVKEH-DDI 59 Query: 205 VSNQTFVVRKDIYEAIGSPDMRTPEGFLNALKMAKEKYPEINGQPIIPLGLHEFTENGND 264 +SNQTF+VRKDIYEAIGSPDM TPEGF A++ A E +PE+NG+ +IP+G H F GN Sbjct: 60 ISNQTFLVRKDIYEAIGSPDMTTPEGFKAAVEKAAEMFPEVNGEKLIPVGSHVFDNQGNV 119 Query: 265 SLEGYIQNFLNIPWEKDGKVYDRETDPEYVRWMKTLRQANQDGLLAKDIFIDKRAQMEEK 324 S + Y+ NFL +PWEKDGK YDR TDPEYV W+K R+ ++GLLA DIF+D R QMEEK Sbjct: 120 SFDKYLMNFLAVPWEKDGKYYDRYTDPEYVIWLKMFRELGEEGLLANDIFVDTRIQMEEK 179 Query: 325 IAQGRYFAMLYQRTDFASQLGTIFQKNPEQTYIAIDGPANTKLDPPALNGPSIAGWTVTL 384 +A+GRYF MLYQ +D SQ +++ +P+ Y+A++GP N+ D P L ++ GWT+TL Sbjct: 180 LAKGRYFCMLYQYSDTISQQKALYENDPDSIYMAVEGPRNSNGDDPTLPTNNMNGWTLTL 239 Query: 385 ISKDVKDKARAIKFLSYLNSEEGNKDLYLGEKGVSYDTIDGKDQFLPEAFDLMNKDRSAF 444 ISK+ K RAI F+ Y+ SE G +YLG +GV+YD +DGK + ++N DR + Sbjct: 240 ISKNCKYPERAIAFMDYMMSEHGQMLIYLGVEGVTYDIVDGKPVLKEDVSKILNSDRETY 299 Query: 445 DKKYGSAFTFWMLQNTNITDQWAPKSVEPFKQLEDWTRGKTKNTSEFQQIDPTGNSPE-G 503 D+ YG+ +WMLQN + QW K+ +QL W T ++ SPE Sbjct: 300 DRLYGADDAYWMLQNNVMQLQWEQKAGPATEQLLVWACKYTVYNGQYDV--SLSTSPEIA 357 Query: 504 IIATKLKNLRGKTLPKLLMASSDAEFDKLWSDYLAKKEKEGQATFDAYRQTKYEENKKKL 563 + K L +TLPKLL+AS++A+FD+++ +++ K+ G + K+K+ Sbjct: 358 AMDEKCTKLWSETLPKLLLASNEAQFDEIFEEFVGKRNAMGYQEVLKQKTVLMNAAKEKM 417 Query: 564 GM 565 G+ Sbjct: 418 GI 419 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.134 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,422,074,015 Number of extensions: 155227018 Number of successful extensions: 266300 Number of sequences better than 1.0e-05: 130 Number of HSP's gapped: 266099 Number of HSP's successfully gapped: 130 Length of query: 565 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 424 Effective length of database: 1,732,333,088 Effective search space: 734509229312 Effective search space used: 734509229312 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)