BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0015.p (178 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A3I5N5.1 A3I5N5_9BACI Ribosomal-protein-alanine acetyltransferase 125 2e-27 B1IFB3.1 B1IFB3_CLOBK Putative acetyltransferase 101 3e-20 B2TPS8.1 B2TPS8_CLOBB Putative acetyltransferase 97 5e-19 C0C2T8.1 C0C2T8_9CLOT Putative uncharacterized protein 94 5e-18 C4D520.1 C4D520_9SPHI Acetyltransferase, ribosomal protein N-ace... 93 1e-17 >A3I5N5.1 A3I5N5_9BACI Ribosomal-protein-alanine acetyltransferase Length = 168 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 95/165 (57%) Query: 1 LKLKSTRLDLRPLTLAQLSLAGLNYAGLERDFGLNISGTVLDDEMLYAMQVRHSKVLQDP 60 +L S RL L PL L L + L +F L+ ++DDE+ A+ R SKVL+D Sbjct: 3 FELYSKRLRLIPLNAKYLQLLIEHENDLAIEFSLHKLEGIIDDELKQALDYRRSKVLEDE 62 Query: 61 LNYPWLTNWAVIQREEQRLIGFIILKGRPNDQGEVIVGYTINEGHRRQGYATEALQCICG 120 NY W TNW ++ +E+ IG I+LKG PN++ EV++GY + +GY TE + + Sbjct: 63 ENYIWQTNWLIVCKEQNCAIGGIMLKGMPNERQEVVIGYYTFPSFQGRGYMTETIITMIN 122 Query: 121 WIFSDPQALWVIADTEKDNAASHKVLKHLGAQKHREAGELIWWRI 165 W+ P +IADTEKDN ASH+VL+ GA ++E L +WR Sbjct: 123 WLHHQPNVQSIIADTEKDNFASHRVLEKAGATLYKETESLYYWRF 167 >B1IFB3.1 B1IFB3_CLOBK Putative acetyltransferase Length = 164 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 93/163 (57%), Gaps = 1/163 (0%) Query: 3 LKSTRLDLRPLTLAQLSLAGLNYAGLERDFGLNISGTVLDDEMLYAMQVRHSKVLQDPLN 62 +++ RL+L PLTL QL L + LE++ + ++ L ++ ++ +DP N Sbjct: 3 IQTERLELIPLTLNQLKLWIEDIYQLEKELDCSYKAESMEGFFLEVVKGQYEITQKDPNN 62 Query: 63 YPWLTNWAVIQREEQRLIGFIILKGRPNDQGEVIVGYTINEGHRRQGYATEALQCICGWI 122 Y W + + +++++++ ++G K PN+ GEV +GY + + GY TEA++ +CGW Sbjct: 63 YLWHSFFFLVRKDDRVVVGSADFKDIPNENGEVEIGYGLGKEFEHNGYMTEAVKAMCGWA 122 Query: 123 FSDPQALWVIADTEKDNAASHKVLKHLGAQKHREAGELIWWRI 165 VIA+T+ + AS K+LK G +K +E GE +WWR+ Sbjct: 123 LKQNGVTSVIAETDLEGLASQKILKRCGFKKDKE-GETLWWRL 164 >B2TPS8.1 B2TPS8_CLOBB Putative acetyltransferase Length = 355 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 1/163 (0%) Query: 3 LKSTRLDLRPLTLAQLSLAGLNYAGLERDFGLNISGTVLDDEMLYAMQVRHSKVLQDPLN 62 +++ RL++ PL QL L + LE++ + ++ L ++ ++ +DP N Sbjct: 194 IQTERLEIIPLNTDQLKLWVEDIPALEKELNCSYKAESMEGFFLEIVKGQYEITRKDPNN 253 Query: 63 YPWLTNWAVIQREEQRLIGFIILKGRPNDQGEVIVGYTINEGHRRQGYATEALQCICGWI 122 Y W + + +I+++++ +IG K PN+ GEV +GY I + GY TEA + +C W Sbjct: 254 YLWHSFFLLIRKDDRVVIGSADFKDIPNENGEVEIGYGIGKEFEHNGYMTEAAKAMCEWA 313 Query: 123 FSDPQALWVIADTEKDNAASHKVLKHLGAQKHREAGELIWWRI 165 VIA+TE D+ AS ++LK G +K++E E IWW++ Sbjct: 314 LKQNGVTSVIAETESDSFASQRILKCCGFEKYKEE-ETIWWKL 355 >C0C2T8.1 C0C2T8_9CLOT Putative uncharacterized protein Length = 164 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 1/165 (0%) Query: 1 LKLKSTRLDLRPLTLAQLSLAGLNYAGLERDFGLNISGTVLDDEMLYAMQVRHSKVLQDP 60 +++++ RL++ LT QL L N LE++ + ++ + + K +DP Sbjct: 1 MRIETERLNIIALTPEQLELWTYNIRELEKELLCSYKAEPMEGLFREIVCGQVEKAQKDP 60 Query: 61 LNYPWLTNWAVIQREEQRLIGFIILKGRPNDQGEVIVGYTINEGHRRQGYATEALQCICG 120 NY W T W ++++ ++ ++G I K PN GEV +GY + GY TE +Q C Sbjct: 61 ANYLWHTFWFIVKKSDRCVVGSIDFKDVPNSDGEVEIGYGLGRNFEHNGYMTETVQAFCN 120 Query: 121 WIFSDPQALWVIADTEKDNAASHKVLKHLGAQKHREAGELIWWRI 165 W F +IA+T+ D A+S ++L G +++ + IWWR+ Sbjct: 121 WAFKQDDVKHIIAETDIDGASSQRILIRCGFKEYAR-NDTIWWRL 164 >C4D520.1 C4D520_9SPHI Acetyltransferase, ribosomal protein N-acetylase Length = 167 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 1/166 (0%) Query: 3 LKSTRLDLRPLTLAQLSLAGLNYAGLERDFGLNISGTVLDDEMLYAMQVRHSKVLQDP-L 61 +++ RL L PLTL QL N LE+ FGL + + + + LQDP L Sbjct: 2 IETPRLTLVPLTLDQLRTHLANKYELEQVFGLKKGYREVVEPVRSIVVYFTIPRLQDPSL 61 Query: 62 NYPWLTNWAVIQREEQRLIGFIILKGRPNDQGEVIVGYTINEGHRRQGYATEALQCICGW 121 + + T W I RE+Q+ + KG P++ G V +GY G R+GY TE + + W Sbjct: 62 DPLFHTLWLAIDREKQQFVAEAKFKGEPDETGTVEIGYGTYPGMHRKGYMTEMVGGMVNW 121 Query: 122 IFSDPQALWVIADTEKDNAASHKVLKHLGAQKHREAGELIWWRIAR 167 P + V+ADT DN AS KVL+ G + + +++WW I++ Sbjct: 122 ALQQPGVIRVVADTTADNVASQKVLEKSGFRLFDQIEDMLWWEISK 167 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,134,598,812 Number of extensions: 44282742 Number of successful extensions: 87739 Number of sequences better than 1.0e-05: 124 Number of HSP's gapped: 87963 Number of HSP's successfully gapped: 124 Length of query: 178 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 51 Effective length of database: 1,864,227,298 Effective search space: 95075592198 Effective search space used: 95075592198 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)