BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0112.0012.p (165 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG35.1 B3KG35_9BACI Putative uncharacterized protein 192 6e-48 B1DFP3.1 B1DFP3_9BACL Putative uncharacterized protein 166 7e-40 C0ZB81.1 Y2063_BREBN Putative metalloprotease BBR47_20630 EC=3.4... 142 1e-32 A7GSZ7.1 Y3029_BACCN Putative metalloprotease Bcer98_3029 EC=3.4... 131 2e-29 B7GKE1.1 B7GKE1_ANOFW Predicted metal-dependent hydrolase 128 2e-28 >B3KG35.1 B3KG35_9BACI Putative uncharacterized protein Length = 165 Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 115/165 (69%), Positives = 126/165 (76%) Query: 1 MSLAIVWNNEQEEHPISDELITLLESILQKAGEAEGIDEGEVDLTFVNNERIHELNLEYR 60 MSL + WNNEQE+ I +ELI LLE+ILQKAGEAEG+ +GEVDLTFV++E IHELN EYR Sbjct: 1 MSLQLAWNNEQEDFQIGEELIALLEAILQKAGEAEGVTDGEVDLTFVDDEGIHELNREYR 60 Query: 61 GIDRPTDVLSFAMNETGEDEPEIIYALEEDEEGEDVPYVLGDIIISVTRAQEQALEYGHS 120 GIDRPTDVLSFAMNE DE EIIY LEE EE E VP VLGDIIISV RA+ Q+ EYGHS Sbjct: 61 GIDRPTDVLSFAMNEITNDELEIIYELEEGEELESVPDVLGDIIISVPRAKLQSEEYGHS 120 Query: 121 LEREXXXXXXXXXXXXXXYDHQDAVSEAEMMSKQEKVLAQVGLTR 165 LERE YDHQD SEAEMM KQE VLA+VGLTR Sbjct: 121 LERELGFLFVHGFLHLLGYDHQDEASEAEMMGKQEAVLAEVGLTR 165 >B1DFP3.1 B1DFP3_9BACL Putative uncharacterized protein Length = 165 Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 87/165 (52%), Positives = 115/165 (69%) Query: 1 MSLAIVWNNEQEEHPISDELITLLESILQKAGEAEGIDEGEVDLTFVNNERIHELNLEYR 60 MSL + W+NEQE+ I D+ + LE +LQ AGE EG+ +GEV LTF +NE+IH+LN EYR Sbjct: 1 MSLQLDWSNEQEKMEIPDQWVERLEQLLQIAGEMEGLTDGEVTLTFTDNEQIHQLNREYR 60 Query: 61 GIDRPTDVLSFAMNETGEDEPEIIYALEEDEEGEDVPYVLGDIIISVTRAQEQALEYGHS 120 IDRPTDVLSFAM + G +E +II+ +E ++E + + +LGDI+ISV +AQEQ+ +YGHS Sbjct: 61 NIDRPTDVLSFAMQDEGTEELDIIFEVESEDEIDPISGMLGDIVISVEKAQEQSEDYGHS 120 Query: 121 LEREXXXXXXXXXXXXXXYDHQDAVSEAEMMSKQEKVLAQVGLTR 165 LERE YDH D EAEM +KQE VL + GL+R Sbjct: 121 LEREIGFLFVHGFLHLLGYDHMDDAGEAEMTAKQEAVLQKAGLSR 165 >C0ZB81.1 Y2063_BREBN Putative metalloprotease BBR47_20630 EC=3.4.24.- Length = 159 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/151 (54%), Positives = 99/151 (65%), Gaps = 4/151 (2%) Query: 15 PISDELITLLESILQKAGEAEGIDEGEVDLTFVNNERIHELNLEYRGIDRPTDVLSFAMN 74 PI + L LL L+ A + E + +GEV +T VNNERIHELN +YRG+DRPTDVLSFAMN Sbjct: 13 PIDENLQNLLVRCLEAAAKLEEV-QGEVVVTLVNNERIHELNRDYRGVDRPTDVLSFAMN 71 Query: 75 ETGEDEPEIIYALEEDEEGEDVPYVLGDIIISVTRAQEQALEYGHSLEREXXXXXXXXXX 134 E GE E EI ++EDE E P +LGDIIISV +A EQA +YGHS ERE Sbjct: 72 EPGEGEMEIF--IDEDEASE-FPNMLGDIIISVPKAHEQAEDYGHSFERELGFLTVHGFL 128 Query: 135 XXXXYDHQDAVSEAEMMSKQEKVLAQVGLTR 165 YDH E EM S+QEKVL ++GLTR Sbjct: 129 HLLGYDHGTPEEEKEMFSRQEKVLEEIGLTR 159 >A7GSZ7.1 Y3029_BACCN Putative metalloprotease Bcer98_3029 EC=3.4.24.- Length = 156 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 104/166 (62%), Gaps = 11/166 (6%) Query: 1 MSLAIVWNNEQEEHPISDELITLLESILQKAGEAEGIDEG-EVDLTFVNNERIHELNLEY 59 MSL I + +E EE + +E + ++ +L+KA + EG+++G E+ +TFV+NERI E+N +Y Sbjct: 1 MSLVIDFFDETEE--VKEEYVNMIRELLEKAAQMEGVEDGTELSVTFVDNERIREINRDY 58 Query: 60 RGIDRPTDVLSFAMNETGEDEPEIIYALEEDEEGEDVPYVLGDIIISVTRAQEQALEYGH 119 RG D+PTDV+SFA+ + GE E EII G D+P +LGD+IIS+ R +EQA EYGH Sbjct: 59 RGKDQPTDVISFALEDMGEGEVEII--------GADMPRMLGDLIISIPRTKEQAEEYGH 110 Query: 120 SLEREXXXXXXXXXXXXXXYDHQDAVSEAEMMSKQEKVLAQVGLTR 165 S +RE YDH E EM KQ+++L GL R Sbjct: 111 SFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGKQKEILGAFGLRR 156 >B7GKE1.1 B7GKE1_ANOFW Predicted metal-dependent hydrolase Length = 194 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/151 (47%), Positives = 97/151 (64%), Gaps = 9/151 (5%) Query: 16 ISDELITLLESILQKAGEAEGI-DEGEVDLTFVNNERIHELNLEYRGIDRPTDVLSFAMN 74 +++E + L+E +LQ A + E + DE EV +TFV+NE+I E+N +YRG D+PTDV+SFA+ Sbjct: 52 MTEEQMNLIEQLLQHAAKEEHVPDEAEVSVTFVDNEKIREINRDYRGKDQPTDVISFALE 111 Query: 75 ETGEDEPEIIYALEEDEEGEDVPYVLGDIIISVTRAQEQALEYGHSLEREXXXXXXXXXX 134 E GE+E I+ G DVP VLGDIIISV +A+EQA +YGHS RE Sbjct: 112 EMGEEEIAIV--------GADVPPVLGDIIISVPKAREQAEQYGHSFMRELGFLAVHGFL 163 Query: 135 XXXXYDHQDAVSEAEMMSKQEKVLAQVGLTR 165 YDH+ E M +KQE++L Q GLTR Sbjct: 164 HLLGYDHETEEEEKVMFAKQEQLLQQFGLTR 194 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.310 0.131 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 867,665,029 Number of extensions: 33831573 Number of successful extensions: 77066 Number of sequences better than 1.0e-05: 737 Number of HSP's gapped: 76603 Number of HSP's successfully gapped: 737 Length of query: 165 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 40 Effective length of database: 1,883,069,328 Effective search space: 75322773120 Effective search space used: 75322773120 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 125 (52.8 bits)