BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0112.0002.p (238 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3AZY8.1 C3AZY8_BACMY Alpha-acetolactate decarboxylase 311 4e-83 C3AI18.1 C3AI18_BACMY Alpha-acetolactate decarboxylase 311 4e-83 C2ZKD1.1 C2ZKD1_BACCE Alpha-acetolactate decarboxylase 310 7e-83 C2Z3U6.1 C2Z3U6_BACCE Alpha-acetolactate decarboxylase 310 7e-83 C3GX13.1 C3GX13_BACTU Alpha-acetolactate decarboxylase 310 1e-82 >C3AZY8.1 C3AZY8_BACMY Alpha-acetolactate decarboxylase Length = 252 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 142/234 (60%), Positives = 180/234 (76%) Query: 3 NHVIYQVSTMIALLSGQYDGSVSFGKLKEYGDFGIGTFHQLDGEMIAFDGGFYHLYPDGS 62 N+ +YQ STM+ALL G YDG ++F KLKE+GDFGIGTF QLDGEMIAFDG FYHL DGS Sbjct: 17 NNEVYQTSTMLALLDGIYDGIINFDKLKEHGDFGIGTFDQLDGEMIAFDGEFYHLRSDGS 76 Query: 63 ARPVSLEESTPFSTVTFFEQDQTLLVHTPLARSELEQVIHTLLPSPNIFYAIRIDGHFRE 122 A V+ EE+TPF+TVTFFE++ + ++ P+ R E+E ++H L+PS N+FYAIR+DG FRE Sbjct: 77 AEMVAPEETTPFATVTFFEKEMSYTINRPMNREEVEALLHELMPSKNLFYAIRMDGTFRE 136 Query: 123 VHTRTVSHQDKPYKPFVEVTENEPSFHFSNEDGVIAGFWMPAFAQGIGVSGYHLHYINDA 182 V TRTV Q+KPY P VEVT+++P F FS+ G +AGFW P +AQGIGV+G+HLHYI+D Sbjct: 137 VRTRTVPRQEKPYTPLVEVTKSQPIFSFSHTKGTMAGFWTPDYAQGIGVAGFHLHYIDDE 196 Query: 183 RNGGGHVLDFIVEHCTISICSSEDLRLKLPHNDDYLKADLAAASLNEDIAAAEG 236 R+GGGHV DF VE+CTI IC + L LP D++ ADL+ +L DIA AEG Sbjct: 197 RSGGGHVFDFTVENCTIEICQKAHMHLALPETADFMAADLSRENLENDIATAEG 250 >C3AI18.1 C3AI18_BACMY Alpha-acetolactate decarboxylase Length = 252 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 142/234 (60%), Positives = 180/234 (76%) Query: 3 NHVIYQVSTMIALLSGQYDGSVSFGKLKEYGDFGIGTFHQLDGEMIAFDGGFYHLYPDGS 62 N+ +YQ STM+ALL G YDG ++F KLKE+GDFGIGTF QLDGEMIAFDG FYHL DGS Sbjct: 17 NNEVYQTSTMLALLDGIYDGIINFDKLKEHGDFGIGTFDQLDGEMIAFDGEFYHLRSDGS 76 Query: 63 ARPVSLEESTPFSTVTFFEQDQTLLVHTPLARSELEQVIHTLLPSPNIFYAIRIDGHFRE 122 A V+ EE+TPF+TVTFFE++ + ++ P+ R E+E ++H L+PS N+FYAIR+DG FRE Sbjct: 77 AEMVAPEETTPFATVTFFEKEMSYTINRPMNREEVEALLHELMPSKNLFYAIRMDGTFRE 136 Query: 123 VHTRTVSHQDKPYKPFVEVTENEPSFHFSNEDGVIAGFWMPAFAQGIGVSGYHLHYINDA 182 V TRTV Q+KPY P VEVT+++P F FS+ G +AGFW P +AQGIGV+G+HLHYI+D Sbjct: 137 VRTRTVPRQEKPYTPLVEVTKSQPIFSFSHTKGTMAGFWTPDYAQGIGVAGFHLHYIDDE 196 Query: 183 RNGGGHVLDFIVEHCTISICSSEDLRLKLPHNDDYLKADLAAASLNEDIAAAEG 236 R+GGGHV DF VE+CTI IC + L LP D++ ADL+ +L DIA AEG Sbjct: 197 RSGGGHVFDFTVENCTIEICQKAHMHLALPETADFMAADLSRENLENDIATAEG 250 >C2ZKD1.1 C2ZKD1_BACCE Alpha-acetolactate decarboxylase Length = 258 Score = 310 bits (794), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 139/231 (60%), Positives = 176/231 (76%) Query: 6 IYQVSTMIALLSGQYDGSVSFGKLKEYGDFGIGTFHQLDGEMIAFDGGFYHLYPDGSARP 65 +YQ STM+ALL G YDG ++F +LKE GDFGIGTF QLDGEMIAFD FYHL DGSA Sbjct: 26 VYQTSTMLALLDGIYDGVINFEELKERGDFGIGTFDQLDGEMIAFDNEFYHLRSDGSAEK 85 Query: 66 VSLEESTPFSTVTFFEQDQTLLVHTPLARSELEQVIHTLLPSPNIFYAIRIDGHFREVHT 125 V LEE+TPF+TVTFFE++ + V P+ R E+E ++H L+PS N+FYAIR+DG FREV T Sbjct: 86 VELEETTPFATVTFFEKEMSYTVERPMNREEVEALLHELMPSKNLFYAIRMDGTFREVRT 145 Query: 126 RTVSHQDKPYKPFVEVTENEPSFHFSNEDGVIAGFWMPAFAQGIGVSGYHLHYINDARNG 185 RTV Q+KPY P VEVT+++P F F + +G +AGFW P +AQGIGV+G+HLHYI+D RNG Sbjct: 146 RTVPRQEKPYTPLVEVTKSQPIFSFKDTEGTLAGFWTPDYAQGIGVAGFHLHYIDDERNG 205 Query: 186 GGHVLDFIVEHCTISICSSEDLRLKLPHNDDYLKADLAAASLNEDIAAAEG 236 GGHV D++VE+CTI IC + L LP D++ A+L+ +L DIA AEG Sbjct: 206 GGHVFDYVVENCTIQICQKSHMHLALPETADFMAAELSRENLENDIATAEG 256 >C2Z3U6.1 C2Z3U6_BACCE Alpha-acetolactate decarboxylase Length = 258 Score = 310 bits (794), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 139/231 (60%), Positives = 176/231 (76%) Query: 6 IYQVSTMIALLSGQYDGSVSFGKLKEYGDFGIGTFHQLDGEMIAFDGGFYHLYPDGSARP 65 +YQ STM+ALL G YDG ++F +LKE GDFGIGTF QLDGEMIAFD FYHL DGSA Sbjct: 26 VYQTSTMLALLDGIYDGVINFEELKERGDFGIGTFDQLDGEMIAFDNEFYHLRSDGSAEK 85 Query: 66 VSLEESTPFSTVTFFEQDQTLLVHTPLARSELEQVIHTLLPSPNIFYAIRIDGHFREVHT 125 V LEE+TPF+TVTFFE++ + V P+ R E+E ++H L+PS N+FYAIR+DG FREV T Sbjct: 86 VELEETTPFATVTFFEKEMSYTVERPMNREEVEALLHELMPSKNLFYAIRMDGTFREVRT 145 Query: 126 RTVSHQDKPYKPFVEVTENEPSFHFSNEDGVIAGFWMPAFAQGIGVSGYHLHYINDARNG 185 RTV Q+KPY P VEVT+++P F F + +G +AGFW P +AQGIGV+G+HLHYI+D RNG Sbjct: 146 RTVPRQEKPYTPLVEVTKSQPIFSFKDTEGTLAGFWTPDYAQGIGVAGFHLHYIDDERNG 205 Query: 186 GGHVLDFIVEHCTISICSSEDLRLKLPHNDDYLKADLAAASLNEDIAAAEG 236 GGHV D++VE+CTI IC + L LP D++ A+L+ +L DIA AEG Sbjct: 206 GGHVFDYVVENCTIQICQKSHMHLALPETADFMAAELSRENLENDIATAEG 256 >C3GX13.1 C3GX13_BACTU Alpha-acetolactate decarboxylase Length = 252 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 142/236 (60%), Positives = 180/236 (76%), Gaps = 1/236 (0%) Query: 1 MKNHVIYQVSTMIALLSGQYDGSVSFGKLKEYGDFGIGTFHQLDGEMIAFDGGFYHLYPD 60 M N V YQ STM+ALL G YDG +SF LK++GDFGIGTF QLDGEMIAFD GFYHL D Sbjct: 16 MSNEV-YQTSTMLALLDGIYDGVISFEDLKKHGDFGIGTFDQLDGEMIAFDNGFYHLRSD 74 Query: 61 GSARPVSLEESTPFSTVTFFEQDQTLLVHTPLARSELEQVIHTLLPSPNIFYAIRIDGHF 120 GSA V EE+TPF+TVTFFE++ + V P+ R E+E ++H L+PS N+FYAIR+DG F Sbjct: 75 GSAEKVEPEETTPFATVTFFEKEMSYKVERPMNREEVEALLHELMPSKNLFYAIRMDGTF 134 Query: 121 REVHTRTVSHQDKPYKPFVEVTENEPSFHFSNEDGVIAGFWMPAFAQGIGVSGYHLHYIN 180 REV TRTV Q+KPY P VEVT+++P F F N +G +AGFW P +AQGIGV+G+HLHYI+ Sbjct: 135 REVRTRTVPRQEKPYTPLVEVTKSQPIFSFENTEGTLAGFWTPDYAQGIGVAGFHLHYID 194 Query: 181 DARNGGGHVLDFIVEHCTISICSSEDLRLKLPHNDDYLKADLAAASLNEDIAAAEG 236 D R+GGGHV D++VE+CTI IC + L LP D++KA+L+ +L ++IA AEG Sbjct: 195 DERSGGGHVFDYVVENCTIQICQKAHMHLALPETADFMKAELSRENLEDNIATAEG 250 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,555,690,551 Number of extensions: 69989856 Number of successful extensions: 132871 Number of sequences better than 1.0e-05: 375 Number of HSP's gapped: 132596 Number of HSP's successfully gapped: 375 Length of query: 238 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 106 Effective length of database: 1,817,122,223 Effective search space: 192614955638 Effective search space used: 192614955638 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)