BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0109.0027.p (324 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KKM0.1 B3KKM0_9BACI FAD-dependent pyridine nucleotide-disulphi... 579 e-163 B1DJ05.1 B1DJ05_9BACL Thioredoxin-disulfide reductase EC=1.8.1.9 516 e-145 C0ZKQ7.1 C0ZKQ7_BREBN Ferredoxin--NADP reductase EC=1.18.1.2 486 e-135 C3B9W8.1 C3B9W8_BACMY Putative uncharacterized protein 445 e-123 C3ASD1.1 C3ASD1_BACMY Putative uncharacterized protein 445 e-123 >B3KKM0.1 B3KKM0_9BACI FAD-dependent pyridine nucleotide-disulphide oxidoreductase Length = 333 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 276/324 (85%), Positives = 306/324 (94%) Query: 1 MSDLLIIGGGPAGMFAAFYGGMRQASVTLIESMPQLGGQLAALYPEKYIYDVAGFPKVTG 60 M+DLLIIGGGPAGMFAAFYGGMRQASV LIESMPQLGGQLAALYPEKYIYDVAGFPKVT Sbjct: 10 MTDLLIIGGGPAGMFAAFYGGMRQASVKLIESMPQLGGQLAALYPEKYIYDVAGFPKVTA 69 Query: 61 QELVDNLSRQMELFQSDIRLEEKVVSLKKQDERHFVITTDKAEYHSKAVIITAGVGAFEP 120 QELV+NLS QMELF++DIRLEEKV +++K +ERHFV+ T+ E+H+KAVIITAGVGAF+P Sbjct: 70 QELVNNLSAQMELFKTDIRLEEKVQAVEKLEERHFVVKTNLGEHHAKAVIITAGVGAFQP 129 Query: 121 RRLELPEAARFEKANLHYFVSDLNAFKGKKVLISGGGDSAVDWALMLEPIAEQVTLIHRR 180 RRLE+ A ++EKANLHYFV+DL+ FKGKKVLISGGGDSAVDWALM+EPIAEQVTL+HRR Sbjct: 130 RRLEIEGAEKYEKANLHYFVNDLSRFKGKKVLISGGGDSAVDWALMIEPIAEQVTLVHRR 189 Query: 181 DKFRAHEHSVENLMASKVNVITPSEITGLHGEEFITKVTLSHIKTKETQELEVDSVIVNF 240 DKFRAHEHSVE LMASKVN++TP+EIT LHGE+ ITKVTLSHIKTKETQE+EVD VIVNF Sbjct: 190 DKFRAHEHSVEQLMASKVNIVTPTEITELHGEDAITKVTLSHIKTKETQEIEVDDVIVNF 249 Query: 241 GFVSSLGPIAEWGIDIESNSIVVDSRMETSIPGIFAAGDITTYPGKLKLIAVGFGEAPTA 300 GFVSSLGPI+EWGI IESNSIVVDSRMETSIPGIFAAGDITTYPGK+KLIAVGFGEAPTA Sbjct: 250 GFVSSLGPISEWGIAIESNSIVVDSRMETSIPGIFAAGDITTYPGKVKLIAVGFGEAPTA 309 Query: 301 VNNAKVYIDPEAKLSPGHSSNLKL 324 VNNAKVY DPEA+L+PGHSSN+KL Sbjct: 310 VNNAKVYFDPEARLAPGHSSNMKL 333 >B1DJ05.1 B1DJ05_9BACL Thioredoxin-disulfide reductase EC=1.8.1.9 Length = 333 Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust. Identities = 251/324 (77%), Positives = 292/324 (90%) Query: 1 MSDLLIIGGGPAGMFAAFYGGMRQASVTLIESMPQLGGQLAALYPEKYIYDVAGFPKVTG 60 ++D++IIGGGPAG+FAAFYGGMRQASV +IESMPQLGGQLAALYPEKYIYDVAGFPKVT Sbjct: 10 LADIIIIGGGPAGLFAAFYGGMRQASVKIIESMPQLGGQLAALYPEKYIYDVAGFPKVTA 69 Query: 61 QELVDNLSRQMELFQSDIRLEEKVVSLKKQDERHFVITTDKAEYHSKAVIITAGVGAFEP 120 QELVD L Q+ LFQ ++ LEEKVV + KQ ER F + T+KA +++KAVIITAGVGAFEP Sbjct: 70 QELVDRLIEQISLFQPEVLLEEKVVEVNKQSERLFEVITNKAVHYAKAVIITAGVGAFEP 129 Query: 121 RRLELPEAARFEKANLHYFVSDLNAFKGKKVLISGGGDSAVDWALMLEPIAEQVTLIHRR 180 R+LELPEA ++EK+NLHYFV DLN FKG+KVL++GGGDSAVDWALMLEPIAE VTL+HRR Sbjct: 130 RKLELPEAVQYEKSNLHYFVGDLNRFKGQKVLLTGGGDSAVDWALMLEPIAESVTLVHRR 189 Query: 181 DKFRAHEHSVENLMASKVNVITPSEITGLHGEEFITKVTLSHIKTKETQELEVDSVIVNF 240 DKFRAHEHSVENLM SKV V TP E+T LHG+ I++VTL+ +KTK+ E+EVD+VIVN+ Sbjct: 190 DKFRAHEHSVENLMNSKVIVQTPKEVTSLHGDGRISRVTLTDVKTKDQTEVEVDAVIVNY 249 Query: 241 GFVSSLGPIAEWGIDIESNSIVVDSRMETSIPGIFAAGDITTYPGKLKLIAVGFGEAPTA 300 GFVSSLGPIAEWGI+I+ SI+VD+RMETS+ GIFAAGDITTYPGKLKLIAVGFGEAPTA Sbjct: 250 GFVSSLGPIAEWGIEIQGGSIIVDTRMETSVSGIFAAGDITTYPGKLKLIAVGFGEAPTA 309 Query: 301 VNNAKVYIDPEAKLSPGHSSNLKL 324 +NNAKVYIDP+AKLSPGHSSN+KL Sbjct: 310 INNAKVYIDPDAKLSPGHSSNMKL 333 >C0ZKQ7.1 C0ZKQ7_BREBN Ferredoxin--NADP reductase EC=1.18.1.2 Length = 336 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 228/320 (71%), Positives = 276/320 (86%) Query: 3 DLLIIGGGPAGMFAAFYGGMRQASVTLIESMPQLGGQLAALYPEKYIYDVAGFPKVTGQE 62 D+ IIGGGPAG+F AFYGGMRQASV +IESMPQLGGQL+ALYPEKYIYDVAGFPKV Q+ Sbjct: 12 DITIIGGGPAGLFTAFYGGMRQASVKIIESMPQLGGQLSALYPEKYIYDVAGFPKVLAQD 71 Query: 63 LVDNLSRQMELFQSDIRLEEKVVSLKKQDERHFVITTDKAEYHSKAVIITAGVGAFEPRR 122 L++NL Q+ FQ + LEEKV ++ K+ + F ITTDK ++SK+VIITAGVGAFEPRR Sbjct: 72 LINNLKDQISRFQQTVCLEEKVENVVKKVDDVFEITTDKGTHYSKSVIITAGVGAFEPRR 131 Query: 123 LELPEAARFEKANLHYFVSDLNAFKGKKVLISGGGDSAVDWALMLEPIAEQVTLIHRRDK 182 LE P+A ++EK+NLHYFV+DLN+FKG++V + GGGDSA+DW+LMLEPIA++V LIHRRDK Sbjct: 132 LEHPDAVKYEKSNLHYFVTDLNSFKGQRVAVIGGGDSALDWSLMLEPIAKEVHLIHRRDK 191 Query: 183 FRAHEHSVENLMASKVNVITPSEITGLHGEEFITKVTLSHIKTKETQELEVDSVIVNFGF 242 FRAHEHSVE LM+SKVNV TP EI+ LHGEE I K+TL++ TKE +LEVD+VIVNFGF Sbjct: 192 FRAHEHSVEMLMSSKVNVTTPYEISALHGEERIEKLTLANCTTKEEMDLEVDAVIVNFGF 251 Query: 243 VSSLGPIAEWGIDIESNSIVVDSRMETSIPGIFAAGDITTYPGKLKLIAVGFGEAPTAVN 302 +SSLGPI WG+++E SIVVD+RME++IPGIFAAGDI TYPGK+KLIAVGFGEAPTAVN Sbjct: 252 ISSLGPIKNWGLELEKGSIVVDTRMESNIPGIFAAGDIATYPGKVKLIAVGFGEAPTAVN 311 Query: 303 NAKVYIDPEAKLSPGHSSNL 322 NA Y +P+AKL PGHSS++ Sbjct: 312 NAVSYFNPDAKLQPGHSSSM 331 >C3B9W8.1 C3B9W8_BACMY Putative uncharacterized protein Length = 329 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/320 (67%), Positives = 259/320 (80%) Query: 3 DLLIIGGGPAGMFAAFYGGMRQASVTLIESMPQLGGQLAALYPEKYIYDVAGFPKVTGQE 62 D+ IIGGGP G+F AFYGGMRQASV +IES+PQLGGQL+ALYPEKYIYDVAGFPKV QE Sbjct: 9 DITIIGGGPTGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKVRAQE 68 Query: 63 LVDNLSRQMELFQSDIRLEEKVVSLKKQDERHFVITTDKAEYHSKAVIITAGVGAFEPRR 122 LVDNL QM+ F+ + LEE V +L+KQ + F + T+K ++SK+VIITAG GAF+PRR Sbjct: 69 LVDNLKEQMKKFEPTVCLEEAVDTLEKQADGVFKLVTNKGTHYSKSVIITAGNGAFQPRR 128 Query: 123 LELPEAARFEKANLHYFVSDLNAFKGKKVLISGGGDSAVDWALMLEPIAEQVTLIHRRDK 182 LEL +FEK NLHYFV D+N F GK+V++ GGGDSAVDW +MLEPIAEQVT++HRRDK Sbjct: 129 LELDSVEKFEKKNLHYFVDDMNKFTGKRVVVFGGGDSAVDWTMMLEPIAEQVTIVHRRDK 188 Query: 183 FRAHEHSVENLMASKVNVITPSEITGLHGEEFITKVTLSHIKTKETQELEVDSVIVNFGF 242 FRAHEHSVENL S+ +V TP L GE+ I +V L H+KT+E ++VD VIVN+GF Sbjct: 189 FRAHEHSVENLTNSRADVKTPYVPVELIGEDKIEQVVLQHVKTEEKVVIDVDDVIVNYGF 248 Query: 243 VSSLGPIAEWGIDIESNSIVVDSRMETSIPGIFAAGDITTYPGKLKLIAVGFGEAPTAVN 302 VSSLGPI WG+DI+ NSIVV+S+MET+IPGI+AAGDI TY GK+KLIA GFGEAPTAVN Sbjct: 249 VSSLGPIKNWGLDIQKNSIVVNSKMETNIPGIYAAGDICTYEGKVKLIACGFGEAPTAVN 308 Query: 303 NAKVYIDPEAKLSPGHSSNL 322 NAK Y DP AKL P HSS++ Sbjct: 309 NAKAYFDPNAKLQPMHSSSM 328 >C3ASD1.1 C3ASD1_BACMY Putative uncharacterized protein Length = 329 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/320 (67%), Positives = 259/320 (80%) Query: 3 DLLIIGGGPAGMFAAFYGGMRQASVTLIESMPQLGGQLAALYPEKYIYDVAGFPKVTGQE 62 D+ IIGGGP G+F AFYGGMRQASV +IES+PQLGGQL+ALYPEKYIYDVAGFPKV QE Sbjct: 9 DITIIGGGPTGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKVRAQE 68 Query: 63 LVDNLSRQMELFQSDIRLEEKVVSLKKQDERHFVITTDKAEYHSKAVIITAGVGAFEPRR 122 LVDNL QM+ F+ + LEE V +L+KQ + F + T+K ++SK+VIITAG GAF+PRR Sbjct: 69 LVDNLKEQMKKFEPTVCLEEAVDTLEKQADGVFKLVTNKGTHYSKSVIITAGNGAFQPRR 128 Query: 123 LELPEAARFEKANLHYFVSDLNAFKGKKVLISGGGDSAVDWALMLEPIAEQVTLIHRRDK 182 LEL +FEK NLHYFV D+N F GK+V++ GGGDSAVDW +MLEPIAEQVT++HRRDK Sbjct: 129 LELDSVEKFEKKNLHYFVDDMNKFTGKRVVVFGGGDSAVDWTMMLEPIAEQVTIVHRRDK 188 Query: 183 FRAHEHSVENLMASKVNVITPSEITGLHGEEFITKVTLSHIKTKETQELEVDSVIVNFGF 242 FRAHEHSVENL S+ +V TP L GE+ I +V L H+KT+E ++VD VIVN+GF Sbjct: 189 FRAHEHSVENLTNSRADVKTPYVPVELIGEDKIEQVVLQHVKTEEKVVIDVDDVIVNYGF 248 Query: 243 VSSLGPIAEWGIDIESNSIVVDSRMETSIPGIFAAGDITTYPGKLKLIAVGFGEAPTAVN 302 VSSLGPI WG+DI+ NSIVV+S+MET+IPGI+AAGDI TY GK+KLIA GFGEAPTAVN Sbjct: 249 VSSLGPIKNWGLDIQKNSIVVNSKMETNIPGIYAAGDICTYEGKVKLIACGFGEAPTAVN 308 Query: 303 NAKVYIDPEAKLSPGHSSNL 322 NAK Y DP AKL P HSS++ Sbjct: 309 NAKAYFDPNAKLQPMHSSSM 328 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,866,118,834 Number of extensions: 74289331 Number of successful extensions: 271203 Number of sequences better than 1.0e-05: 3760 Number of HSP's gapped: 264267 Number of HSP's successfully gapped: 3762 Length of query: 324 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 188 Effective length of database: 1,779,438,163 Effective search space: 334534374644 Effective search space used: 334534374644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)