BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0008.p (375 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1KTT2.1 B1KTT2_CLOBM Iron chelate uptake ABC transporter, FeCT ... 426 e-117 A7GA61.1 A7GA61_CLOBL Iron chelate uptake ABC transporter, FeCT ... 424 e-117 A7FQV7.1 A7FQV7_CLOB1 Iron chelate uptake ABC transporter, FeCT ... 424 e-117 A5HYJ5.1 A5HYJ5_CLOBH Iron chelate uptake ABC transporter, FeCT ... 424 e-117 B1Q923.1 B1Q923_CLOBO Iron chelate uptake ABC transporter, FeCT ... 423 e-116 >B1KTT2.1 B1KTT2_CLOBM Iron chelate uptake ABC transporter, FeCT family, permease protein Length = 372 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/324 (62%), Positives = 256/324 (79%) Query: 51 GQVDIPVSQSYRILLHHITGIQIGDVQELTSGSFVDIIWKIRFPRVLMAMFIGAGLTLCG 110 GQV IP SQSYRIL++ +TG+Q G++ + +G F +IIW+IRFPRVL+AM G GLTLCG Sbjct: 49 GQVSIPFSQSYRILIYKLTGLQTGNLDQFINGMFEEIIWQIRFPRVLLAMIAGIGLTLCG 108 Query: 111 TIMQAAVQNPLADPYILGISSGASLGATFAILIGFGSMGLLGQTXXXXXXXXXXXXXSLL 170 +MQA+VQNPLADPYILGISSGASLGATF+I+IGFG G LG+ L Sbjct: 109 VVMQASVQNPLADPYILGISSGASLGATFSIMIGFGVAGTLGELGVAFWAFIGAFGAGAL 168 Query: 171 VLILASAGGKMTSVKLVLAGMVINALCTAFANFIVYFANNAEGIKTVTFWTMGSLAAASW 230 V+ LAS GGKM+SVKLVLAG VINALC A ++FIVYFA +AEGI++VTFWTMGSL +A W Sbjct: 169 VMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQW 228 Query: 231 DKLPLISXXXXXXXXXXLMQFRVLNAMLLGDEAAVTLGIHLGVFRKAYMLITALITGVMV 290 KLP+I+ L Q R++N M++G+E AVTLGI+L +R+ YM+I+ +TGV+V Sbjct: 229 GKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMMISVAVTGVIV 288 Query: 291 ASCGMIGFVGLIIPHLVRGLVGSDHRRLLPASILFGAIFLIWTDVIARTIVPNVELPIGI 350 A+CG+IGFVGLI+PH+VR +VGSD++RLLP SILF AIFLIW D+ ARTI+PN ELPIGI Sbjct: 289 ATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIPNGELPIGI 348 Query: 351 ITALIGAPMFMYMLIKKGYAFGGK 374 IT+L+GAP+FMYML+K+ Y FGGK Sbjct: 349 ITSLLGAPVFMYMLVKRSYGFGGK 372 >A7GA61.1 A7GA61_CLOBL Iron chelate uptake ABC transporter, FeCT family, permease protein Length = 372 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/324 (62%), Positives = 256/324 (79%) Query: 51 GQVDIPVSQSYRILLHHITGIQIGDVQELTSGSFVDIIWKIRFPRVLMAMFIGAGLTLCG 110 GQV IP SQSYRIL++ +TG+Q G++ + +G F +IIW+IRFPRVL+AM G GLTLCG Sbjct: 49 GQVSIPFSQSYRILIYKLTGLQTGNLDQFMNGMFEEIIWQIRFPRVLLAMIAGIGLTLCG 108 Query: 111 TIMQAAVQNPLADPYILGISSGASLGATFAILIGFGSMGLLGQTXXXXXXXXXXXXXSLL 170 +MQA+VQNPLADPYILGISSGASLGATF+I+IGFG+ G L + L Sbjct: 109 VVMQASVQNPLADPYILGISSGASLGATFSIMIGFGAAGTLSELGVAFWAFIGAFGAGAL 168 Query: 171 VLILASAGGKMTSVKLVLAGMVINALCTAFANFIVYFANNAEGIKTVTFWTMGSLAAASW 230 V+ LAS GGKM+SVKLVLAG VINALC A ++FIVYFA +AEGI++VTFWTMGSL +A W Sbjct: 169 VMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQW 228 Query: 231 DKLPLISXXXXXXXXXXLMQFRVLNAMLLGDEAAVTLGIHLGVFRKAYMLITALITGVMV 290 KLP+I+ L Q R++N M++G+E AVTLGI+L +R+ YM+I+ +TGV+V Sbjct: 229 GKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMVISVAVTGVIV 288 Query: 291 ASCGMIGFVGLIIPHLVRGLVGSDHRRLLPASILFGAIFLIWTDVIARTIVPNVELPIGI 350 A+CG+IGFVGLI+PH+VR +VGSD++RLLP SILF AIFLIW D+ ARTI+PN ELPIGI Sbjct: 289 ATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIPNGELPIGI 348 Query: 351 ITALIGAPMFMYMLIKKGYAFGGK 374 IT+L+GAP+FMYML+K+ Y FGGK Sbjct: 349 ITSLLGAPVFMYMLVKRSYGFGGK 372 >A7FQV7.1 A7FQV7_CLOB1 Iron chelate uptake ABC transporter, FeCT family, permease protein Length = 372 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/324 (62%), Positives = 256/324 (79%) Query: 51 GQVDIPVSQSYRILLHHITGIQIGDVQELTSGSFVDIIWKIRFPRVLMAMFIGAGLTLCG 110 GQV IP SQSYRIL++ +TG+Q G++ + +G F +IIW+IRFPRVL+AM G GLTLCG Sbjct: 49 GQVSIPFSQSYRILIYKLTGLQTGNLDQFMNGMFEEIIWQIRFPRVLLAMIAGIGLTLCG 108 Query: 111 TIMQAAVQNPLADPYILGISSGASLGATFAILIGFGSMGLLGQTXXXXXXXXXXXXXSLL 170 +MQA+VQNPLADPYILGISSGASLGATF+I+IGFG+ G L + L Sbjct: 109 VVMQASVQNPLADPYILGISSGASLGATFSIMIGFGAAGTLSELGVAFWAFIGAFGAGAL 168 Query: 171 VLILASAGGKMTSVKLVLAGMVINALCTAFANFIVYFANNAEGIKTVTFWTMGSLAAASW 230 V+ LAS GGKM+SVKLVLAG VINALC A ++FIVYFA +AEGI++VTFWTMGSL +A W Sbjct: 169 VMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQW 228 Query: 231 DKLPLISXXXXXXXXXXLMQFRVLNAMLLGDEAAVTLGIHLGVFRKAYMLITALITGVMV 290 KLP+I+ L Q R++N M++G+E AVTLGI+L +R+ YM+I+ +TGV+V Sbjct: 229 GKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMVISVAVTGVIV 288 Query: 291 ASCGMIGFVGLIIPHLVRGLVGSDHRRLLPASILFGAIFLIWTDVIARTIVPNVELPIGI 350 A+CG+IGFVGLI+PH+VR +VGSD++RLLP SILF AIFLIW D+ ARTI+PN ELPIGI Sbjct: 289 ATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIPNGELPIGI 348 Query: 351 ITALIGAPMFMYMLIKKGYAFGGK 374 IT+L+GAP+FMYML+K+ Y FGGK Sbjct: 349 ITSLLGAPVFMYMLVKRSYGFGGK 372 >A5HYJ5.1 A5HYJ5_CLOBH Iron chelate uptake ABC transporter, FeCT family, permease protein Length = 372 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/324 (62%), Positives = 256/324 (79%) Query: 51 GQVDIPVSQSYRILLHHITGIQIGDVQELTSGSFVDIIWKIRFPRVLMAMFIGAGLTLCG 110 GQV IP SQSYRIL++ +TG+Q G++ + +G F +IIW+IRFPRVL+AM G GLTLCG Sbjct: 49 GQVSIPFSQSYRILIYKLTGLQTGNLDQFMNGMFEEIIWQIRFPRVLLAMIAGIGLTLCG 108 Query: 111 TIMQAAVQNPLADPYILGISSGASLGATFAILIGFGSMGLLGQTXXXXXXXXXXXXXSLL 170 +MQA+VQNPLADPYILGISSGASLGATF+I+IGFG+ G L + L Sbjct: 109 VVMQASVQNPLADPYILGISSGASLGATFSIMIGFGAAGTLSELGVAFWAFIGAFGAGAL 168 Query: 171 VLILASAGGKMTSVKLVLAGMVINALCTAFANFIVYFANNAEGIKTVTFWTMGSLAAASW 230 V+ LAS GGKM+SVKLVLAG VINALC A ++FIVYFA +AEGI++VTFWTMGSL +A W Sbjct: 169 VMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQW 228 Query: 231 DKLPLISXXXXXXXXXXLMQFRVLNAMLLGDEAAVTLGIHLGVFRKAYMLITALITGVMV 290 KLP+I+ L Q R++N M++G+E AVTLGI+L +R+ YM+I+ +TGV+V Sbjct: 229 GKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMVISVAVTGVIV 288 Query: 291 ASCGMIGFVGLIIPHLVRGLVGSDHRRLLPASILFGAIFLIWTDVIARTIVPNVELPIGI 350 A+CG+IGFVGLI+PH+VR +VGSD++RLLP SILF AIFLIW D+ ARTI+PN ELPIGI Sbjct: 289 ATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIPNGELPIGI 348 Query: 351 ITALIGAPMFMYMLIKKGYAFGGK 374 IT+L+GAP+FMYML+K+ Y FGGK Sbjct: 349 ITSLLGAPVFMYMLVKRSYGFGGK 372 >B1Q923.1 B1Q923_CLOBO Iron chelate uptake ABC transporter, FeCT family, permease protein Length = 372 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 203/324 (62%), Positives = 255/324 (78%) Query: 51 GQVDIPVSQSYRILLHHITGIQIGDVQELTSGSFVDIIWKIRFPRVLMAMFIGAGLTLCG 110 GQV IP SQSYRIL++ +TG+Q G++ + +G F +IIW+IRFPRVL+AM G GLTLCG Sbjct: 49 GQVSIPFSQSYRILIYKLTGLQTGNLDQFMNGMFEEIIWQIRFPRVLLAMIAGIGLTLCG 108 Query: 111 TIMQAAVQNPLADPYILGISSGASLGATFAILIGFGSMGLLGQTXXXXXXXXXXXXXSLL 170 +MQA+VQNPLADPYILGISSGASLGATF+I+IGFG G L + L Sbjct: 109 VVMQASVQNPLADPYILGISSGASLGATFSIMIGFGVAGTLSELGVAFWAFIGAFGAGAL 168 Query: 171 VLILASAGGKMTSVKLVLAGMVINALCTAFANFIVYFANNAEGIKTVTFWTMGSLAAASW 230 V+ LAS GGKM+SVKLVLAG VINALC A ++FIVYFA +AEGI++VTFWTMGSL +A W Sbjct: 169 VMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGSLTSAQW 228 Query: 231 DKLPLISXXXXXXXXXXLMQFRVLNAMLLGDEAAVTLGIHLGVFRKAYMLITALITGVMV 290 KLP+I+ L Q R++N M++G+E AVTLGI+L +R+ YM+I+ +TGV+V Sbjct: 229 GKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMVISVAVTGVIV 288 Query: 291 ASCGMIGFVGLIIPHLVRGLVGSDHRRLLPASILFGAIFLIWTDVIARTIVPNVELPIGI 350 A+CG+IGFVGLI+PH+VR +VGSD++RLLP SILF AIFLIW D+ ARTI+PN ELPIGI Sbjct: 289 ATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIPNGELPIGI 348 Query: 351 ITALIGAPMFMYMLIKKGYAFGGK 374 IT+L+GAP+FMYML+K+ Y FGGK Sbjct: 349 ITSLLGAPVFMYMLVKRSYGFGGK 372 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.327 0.141 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,880,915,498 Number of extensions: 70008832 Number of successful extensions: 254415 Number of sequences better than 1.0e-05: 5453 Number of HSP's gapped: 242964 Number of HSP's successfully gapped: 5806 Length of query: 375 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 238 Effective length of database: 1,770,017,148 Effective search space: 421264081224 Effective search space used: 421264081224 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 132 (55.5 bits)