BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0007.p (255 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A7FQV8.1 A7FQV8_CLOB1 Iron chelate uptake ABC transporter, FeCT ... 345 2e-93 A5HYJ6.1 A5HYJ6_CLOBH Iron chelate uptake ABC transporter, FeCT ... 345 2e-93 C3KZC4.1 C3KZC4_CLOB6 Iron chelate uptake ABC transporter, FeCT ... 345 3e-93 B1QI73.1 B1QI73_CLOBO Iron chelate uptake ABC transporter, FeCT ... 345 3e-93 B1KTT3.1 B1KTT3_CLOBM Iron chelate uptake ABC transporter, FeCT ... 344 4e-93 >A7FQV8.1 A7FQV8_CLOB1 Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein Length = 256 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 160/251 (63%), Positives = 204/251 (81%) Query: 1 MNLNVEHLSVSFANANIVKDVSLKVRNKQFVGLIGPNGCGKSTLLKSIYKVIKPSQGKVS 60 MNL V+++ V+ + IVKD+SL+V + +FVG+IGPNGCGKSTLLKSIYKVI P +G V Sbjct: 1 MNLKVDNIFVTLSGRKIVKDISLQVDDGKFVGIIGPNGCGKSTLLKSIYKVINPEKGSVF 60 Query: 61 LAEMNLMKSSPRLVAQKLGVVGQFNELSFDFTVREMVAMGRTPHKGMLETDNQEDANIVS 120 L E +++KS + V++++GVVGQFN+LSFDF+V +MV MGRTPHK ++E DN+ED IV Sbjct: 61 LGEKDVLKSKAKSVSKEMGVVGQFNDLSFDFSVYDMVMMGRTPHKNLMEPDNKEDYEIVH 120 Query: 121 AALHKVNLEGYADRSYNSLSGGEKQRVILARVLAQQPEFMILDEPTNHLDIKYQLQILNI 180 AL KVNL Y+DRSY +LSGGEKQRVILAR +AQ+P+F+ILDEPTNHLDIKYQLQI +I Sbjct: 121 NALKKVNLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILDEPTNHLDIKYQLQIFSI 180 Query: 181 VKKLDIGILAALHDLTLAAEYCDYLYVMKKGQVAACGKPEDILTKELIGQVFDVACETYR 240 VK L IG+LAALHDL++AA YCD LYV+K G++ GKP +ILTKELI V+++ CE Y Sbjct: 181 VKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNEILTKELIKSVYEIDCEIYT 240 Query: 241 NPVTGALGIAY 251 NP+TG + IAY Sbjct: 241 NPITGEMAIAY 251 >A5HYJ6.1 A5HYJ6_CLOBH Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein Length = 256 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 160/251 (63%), Positives = 204/251 (81%) Query: 1 MNLNVEHLSVSFANANIVKDVSLKVRNKQFVGLIGPNGCGKSTLLKSIYKVIKPSQGKVS 60 MNL V+++ V+ + IVKD+SL+V + +FVG+IGPNGCGKSTLLKSIYKVI P +G V Sbjct: 1 MNLKVDNIFVTLSGRKIVKDISLQVDDGKFVGIIGPNGCGKSTLLKSIYKVINPEKGSVF 60 Query: 61 LAEMNLMKSSPRLVAQKLGVVGQFNELSFDFTVREMVAMGRTPHKGMLETDNQEDANIVS 120 L E +++KS + V++++GVVGQFN+LSFDF+V +MV MGRTPHK ++E DN+ED IV Sbjct: 61 LGEKDVLKSKAKSVSKEMGVVGQFNDLSFDFSVYDMVMMGRTPHKNLMEPDNKEDYEIVH 120 Query: 121 AALHKVNLEGYADRSYNSLSGGEKQRVILARVLAQQPEFMILDEPTNHLDIKYQLQILNI 180 AL KVNL Y+DRSY +LSGGEKQRVILAR +AQ+P+F+ILDEPTNHLDIKYQLQI +I Sbjct: 121 NALKKVNLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILDEPTNHLDIKYQLQIFSI 180 Query: 181 VKKLDIGILAALHDLTLAAEYCDYLYVMKKGQVAACGKPEDILTKELIGQVFDVACETYR 240 VK L IG+LAALHDL++AA YCD LYV+K G++ GKP +ILTKELI V+++ CE Y Sbjct: 181 VKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNEILTKELIKSVYEIDCEIYT 240 Query: 241 NPVTGALGIAY 251 NP+TG + IAY Sbjct: 241 NPITGEMAIAY 251 >C3KZC4.1 C3KZC4_CLOB6 Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein Length = 256 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 160/251 (63%), Positives = 203/251 (80%) Query: 1 MNLNVEHLSVSFANANIVKDVSLKVRNKQFVGLIGPNGCGKSTLLKSIYKVIKPSQGKVS 60 MNL V+++ V+ + IVKD+SL+V N +FVG+IGPNGCGKSTLLKSIYKVIKP +G V Sbjct: 1 MNLKVDNIFVTLSGRKIVKDISLQVDNGKFVGIIGPNGCGKSTLLKSIYKVIKPEKGSVF 60 Query: 61 LAEMNLMKSSPRLVAQKLGVVGQFNELSFDFTVREMVAMGRTPHKGMLETDNQEDANIVS 120 L E +++KS + V++++GVVGQFN L FDF+V +MV MGRTPHK ++E DN+ED IV Sbjct: 61 LGEKDVLKSKAKSVSKQMGVVGQFNNLGFDFSVYDMVMMGRTPHKNLMEADNKEDYEIVH 120 Query: 121 AALHKVNLEGYADRSYNSLSGGEKQRVILARVLAQQPEFMILDEPTNHLDIKYQLQILNI 180 AL KV+L Y+DRSY +LSGGEKQRVILAR +AQ+P+F+ILDEPTNHLDIKYQLQI +I Sbjct: 121 NALKKVDLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILDEPTNHLDIKYQLQIFSI 180 Query: 181 VKKLDIGILAALHDLTLAAEYCDYLYVMKKGQVAACGKPEDILTKELIGQVFDVACETYR 240 VK L IG+LAALHDL++AA YCD LYV+K G++ GKP +ILTKELI V+++ CE Y Sbjct: 181 VKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNEILTKELIKSVYEIDCEIYT 240 Query: 241 NPVTGALGIAY 251 NP+TG + IAY Sbjct: 241 NPITGEMAIAY 251 >B1QI73.1 B1QI73_CLOBO Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein Length = 256 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 160/251 (63%), Positives = 203/251 (80%) Query: 1 MNLNVEHLSVSFANANIVKDVSLKVRNKQFVGLIGPNGCGKSTLLKSIYKVIKPSQGKVS 60 MNL V+++ V+ + IVKD+SL+V N +FVG+IGPNGCGKSTLLKSIYKVIKP +G V Sbjct: 1 MNLKVDNIFVTLSGRKIVKDISLQVDNGKFVGIIGPNGCGKSTLLKSIYKVIKPEKGSVF 60 Query: 61 LAEMNLMKSSPRLVAQKLGVVGQFNELSFDFTVREMVAMGRTPHKGMLETDNQEDANIVS 120 L E +++KS + V++++GVVGQFN L FDF+V +MV MGRTPHK ++E DN+ED IV Sbjct: 61 LGEKDVLKSKAKSVSKQMGVVGQFNNLGFDFSVYDMVMMGRTPHKNLMEADNKEDYEIVH 120 Query: 121 AALHKVNLEGYADRSYNSLSGGEKQRVILARVLAQQPEFMILDEPTNHLDIKYQLQILNI 180 AL KV+L Y+DRSY +LSGGEKQRVILAR +AQ+P+F+ILDEPTNHLDIKYQLQI +I Sbjct: 121 NALKKVDLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILDEPTNHLDIKYQLQIFSI 180 Query: 181 VKKLDIGILAALHDLTLAAEYCDYLYVMKKGQVAACGKPEDILTKELIGQVFDVACETYR 240 VK L IG+LAALHDL++AA YCD LYV+K G++ GKP +ILTKELI V+++ CE Y Sbjct: 181 VKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNEILTKELIKSVYEIDCEIYT 240 Query: 241 NPVTGALGIAY 251 NP+TG + IAY Sbjct: 241 NPITGEMAIAY 251 >B1KTT3.1 B1KTT3_CLOBM Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein Length = 256 Score = 344 bits (883), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 160/251 (63%), Positives = 203/251 (80%) Query: 1 MNLNVEHLSVSFANANIVKDVSLKVRNKQFVGLIGPNGCGKSTLLKSIYKVIKPSQGKVS 60 MNL V+++ V+ + IVKD+SL+V + +FVG+IGPNGCGKSTLLKSIYKVI P +G V Sbjct: 1 MNLKVDNIFVTLSGRKIVKDISLQVDDGKFVGIIGPNGCGKSTLLKSIYKVINPEKGSVF 60 Query: 61 LAEMNLMKSSPRLVAQKLGVVGQFNELSFDFTVREMVAMGRTPHKGMLETDNQEDANIVS 120 L E +++KS + V++++GVVGQFN+LSFDF+V +MV MGRTPHK ++E DN+ED IV Sbjct: 61 LGEKDVLKSKAKSVSKEMGVVGQFNDLSFDFSVYDMVMMGRTPHKNLMEPDNKEDYEIVH 120 Query: 121 AALHKVNLEGYADRSYNSLSGGEKQRVILARVLAQQPEFMILDEPTNHLDIKYQLQILNI 180 AL KVNL Y+DRSY +LSGGEKQRVILAR +AQ+P+F+ILDEPTNHLDIKYQLQI +I Sbjct: 121 NALKKVNLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILDEPTNHLDIKYQLQIFSI 180 Query: 181 VKKLDIGILAALHDLTLAAEYCDYLYVMKKGQVAACGKPEDILTKELIGQVFDVACETYR 240 VK L IG+LAALHDL++AA YCD LYV+K G++ GKP ILTKELI V+++ CE Y Sbjct: 181 VKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNQILTKELIKSVYEIDCEIYT 240 Query: 241 NPVTGALGIAY 251 NP+TG + IAY Sbjct: 241 NPITGEMAIAY 251 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,430,651,169 Number of extensions: 56355734 Number of successful extensions: 489204 Number of sequences better than 1.0e-05: 94668 Number of HSP's gapped: 360243 Number of HSP's successfully gapped: 103572 Length of query: 255 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 122 Effective length of database: 1,807,701,208 Effective search space: 220539547376 Effective search space used: 220539547376 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)