BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0105.0008.p (259 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KH08.1 B3KH08_9BACI ABC transporter related 322 2e-86 B1DFM4.1 B1DFM4_9BACL ABC transporter related 317 6e-85 C1P755.1 C1P755_BACCO ABC transporter related 306 8e-82 Q9AJF6.1 Q9AJF6_THEVU ATP-binding protein-homolog 300 6e-80 C0ZBH0.1 C0ZBH0_BREBN Putative ABC transporter ATP-binding protein 279 2e-73 >B3KH08.1 B3KH08_9BACI ABC transporter related Length = 262 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 155/253 (61%), Positives = 194/253 (76%) Query: 2 IIDLHDVTWTQGIHTLLNGVNWTVRPGEHWALLGLNGSGKTTLLNMITGYLWPTTGSISV 61 +I+L DVTW + T+L GV+WTV+ GEHWA+LGLNGSGKTT+LNMI GY+WPT+G++SV Sbjct: 4 MIELDDVTWRREQKTVLTGVDWTVQQGEHWAVLGLNGSGKTTILNMINGYIWPTSGTVSV 63 Query: 62 LGERYGEVDLREMRKSIGWGSSSLQEKLYGTDRTQNVVISGKHATIGLYDHLTEQDTVRA 121 LG R+G VDLRE+RKSIGW SSSLQE++ ++ T +VVISGKHA+IGLY + E D +A Sbjct: 64 LGHRFGRVDLRELRKSIGWVSSSLQERIRPSESTLDVVISGKHASIGLYQKVDEADREQA 123 Query: 122 GELMKQLGCFHLWDREYRTCSQGEKQKLLIARALMADPRVLILDEPCNGLDLFSRERLLD 181 +LMK C HL R Y TCSQGEKQKLLIARALMA PR+LILDE CNGLD SRE LL Sbjct: 124 EQLMKDFNCIHLLGRTYETCSQGEKQKLLIARALMASPRLLILDEACNGLDFLSREALLS 183 Query: 182 SIRELALSKEMPTLIYVTHHTEEILPVFSHTLLLRRGQVVQSGLTSEVLTAGVLSDFFES 241 SI LA + PTL++VTHH EEILP+FSH+LL+RRG V G + ++LT+ L+ FFE+ Sbjct: 184 SITALASKPDAPTLLFVTHHIEEILPIFSHSLLIRRGTVFGKGRSRDMLTSDNLTSFFET 243 Query: 242 EVIVERHGERVYV 254 V V +R ++ Sbjct: 244 PVEVSWQNDRAWM 256 >B1DFM4.1 B1DFM4_9BACL ABC transporter related Length = 264 Score = 317 bits (812), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 201/259 (77%), Gaps = 2/259 (0%) Query: 1 MIIDLHDVTWTQGIHTLLNGVNWTVRPGEHWALLGLNGSGKTTLLNMITGYLWPTTGSIS 60 MIID+ +W +G +L+ +NW V+P EHW LLGLNGSGKTTLLNMI GY+WPT+G +S Sbjct: 1 MIIDIQQASWERGDKQVLHNINWKVQPNEHWCLLGLNGSGKTTLLNMINGYIWPTSGQLS 60 Query: 61 VLGERYGEVDLREMRKSIGWGSSSLQEKLYGTDRTQNVVISGKHATIGLYDHLTEQDTVR 120 VLG+++GE DLRE+RKSIGW S+SLQ+KLYG++ N+V+SGK ATIGLYDH E+D + Sbjct: 61 VLGKKFGEYDLRELRKSIGWVSTSLQQKLYGSENAINIVLSGKFATIGLYDHTNEEDRDQ 120 Query: 121 AGELMKQLGCFHLWDREYRTCSQGEKQKLLIARALMADPRVLILDEPCNGLDLFSRERLL 180 A L+ LGC +L +R Y T SQGE+Q++LIARALMA P++LILDEPC GLD+F+RE+LL Sbjct: 121 ALTLLTSLGCAYLAERTYDTMSQGERQRVLIARALMAKPKLLILDEPCTGLDVFAREQLL 180 Query: 181 DSIRELALSKEMPTLIYVTHHTEEILPVFSHTLLLRRGQVVQSGLTSEVLTAGVLSDFFE 240 I ++A K+ PT+IYVTHH EEILP FSHTLL+++G+V +G T++VLT+ +S FF+ Sbjct: 181 TMIHKVA--KDGPTIIYVTHHVEEILPCFSHTLLIKQGEVFAAGATNDVLTSERMSRFFD 238 Query: 241 SEVIVERHGERVYVRAAQN 259 V +ER R ++ Q+ Sbjct: 239 VPVEIERRDGRNWLFVKQS 257 >C1P755.1 C1P755_BACCO ABC transporter related Length = 259 Score = 306 bits (785), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 151/251 (60%), Positives = 190/251 (75%) Query: 2 IIDLHDVTWTQGIHTLLNGVNWTVRPGEHWALLGLNGSGKTTLLNMITGYLWPTTGSISV 61 II++ V+ + LL+ ++WTV+ GEHWA+LGLNGSGKTTLLNMI GY+WPT GSI V Sbjct: 4 IIEVAGVSLMRDGKKLLSDIHWTVKKGEHWAVLGLNGSGKTTLLNMINGYIWPTKGSIKV 63 Query: 62 LGERYGEVDLREMRKSIGWGSSSLQEKLYGTDRTQNVVISGKHATIGLYDHLTEQDTVRA 121 LG+ +G+ L E+RKSIGW SSS+QE++ T ++VVISGK+A+IGLY+ + QD +A Sbjct: 64 LGKAFGKTSLPELRKSIGWVSSSIQERIPRTQLARDVVISGKYASIGLYEAVDAQDEEKA 123 Query: 122 GELMKQLGCFHLWDREYRTCSQGEKQKLLIARALMADPRVLILDEPCNGLDLFSRERLLD 181 LM+QL C L+ R Y CSQGE+QKLLIARALMA+PR+LILDEPCNGLDLF+RE LL+ Sbjct: 124 LRLMEQLHCASLFSRAYEHCSQGERQKLLIARALMAEPRILILDEPCNGLDLFAREILLE 183 Query: 182 SIRELALSKEMPTLIYVTHHTEEILPVFSHTLLLRRGQVVQSGLTSEVLTAGVLSDFFES 241 S+ ELA K PTL+YVTHH EEI PVF TLL+R G+V + G TSE++ VLS FFE Sbjct: 184 SVEELAKDKNGPTLVYVTHHPEEISPVFQKTLLIRNGEVFRQGRTSEMIEKQVLSRFFEH 243 Query: 242 EVIVERHGERV 252 E+ VE G R Sbjct: 244 EIHVEWRGNRA 254 >Q9AJF6.1 Q9AJF6_THEVU ATP-binding protein-homolog Length = 266 Score = 300 bits (769), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 136/256 (53%), Positives = 196/256 (76%) Query: 1 MIIDLHDVTWTQGIHTLLNGVNWTVRPGEHWALLGLNGSGKTTLLNMITGYLWPTTGSIS 60 MII+++ V+W + +L ++W V+PGE+W L+GLNGSGKTTLLN++ GY+WPTTG++ Sbjct: 1 MIIEMNSVSWMREGKMILKNISWQVQPGENWCLIGLNGSGKTTLLNLVNGYIWPTTGTVK 60 Query: 61 VLGERYGEVDLREMRKSIGWGSSSLQEKLYGTDRTQNVVISGKHATIGLYDHLTEQDTVR 120 + G+++GEV+LRE+RK IGW SSSL ++L+ + N+V+SGK A+IGLYD + D + Sbjct: 61 LFGKKFGEVNLRELRKKIGWVSSSLAQQLHNHETAINIVLSGKFASIGLYDKPEKIDMEK 120 Query: 121 AGELMKQLGCFHLWDREYRTCSQGEKQKLLIARALMADPRVLILDEPCNGLDLFSRERLL 180 A L++ +GC HL + Y+T SQGEKQK+LIARALMA P+++ILDEPC GLDLF+RE+LL Sbjct: 121 AAALLEMMGCGHLITQTYQTLSQGEKQKVLIARALMASPQLMILDEPCTGLDLFAREQLL 180 Query: 181 DSIRELALSKEMPTLIYVTHHTEEILPVFSHTLLLRRGQVVQSGLTSEVLTAGVLSDFFE 240 SI+ ++ + P LIYVTHH EEI F+HTLLL++G++ ++G TS VLT +LSDFF+ Sbjct: 181 HSIQSISAHPQSPALIYVTHHVEEITNCFTHTLLLKQGEIFRAGPTSHVLTEELLSDFFD 240 Query: 241 SEVIVERHGERVYVRA 256 + + VE G+R ++R Sbjct: 241 TPIEVEHRGKRCWIRP 256 >C0ZBH0.1 C0ZBH0_BREBN Putative ABC transporter ATP-binding protein Length = 262 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 140/254 (55%), Positives = 178/254 (70%) Query: 1 MIIDLHDVTWTQGIHTLLNGVNWTVRPGEHWALLGLNGSGKTTLLNMITGYLWPTTGSIS 60 M+ID+ VTW + T+L + W V+ EHW L+GLNGSGKT+LL +I GY+WPT G +S Sbjct: 1 MVIDVRKVTWQRDETTILRDIAWQVQDKEHWCLVGLNGSGKTSLLKIICGYVWPTKGEVS 60 Query: 61 VLGERYGEVDLREMRKSIGWGSSSLQEKLYGTDRTQNVVISGKHATIGLYDHLTEQDTVR 120 VLG YG VDLRE+RKSIGW S++L +L+ + VV+SG+ ATIGLY E D + Sbjct: 61 VLGNLYGTVDLREVRKSIGWVSTALMAQLHEHETALRVVLSGREATIGLYSVPEEADVEK 120 Query: 121 AGELMKQLGCFHLWDREYRTCSQGEKQKLLIARALMADPRVLILDEPCNGLDLFSRERLL 180 A +L+ GC L +R + SQGE+QK+LIARALMA PR+LILDEPC GLDL SRE+LL Sbjct: 121 ASDLLDTFGCRALKNRPFAALSQGERQKVLIARALMASPRLLILDEPCTGLDLLSREQLL 180 Query: 181 DSIRELALSKEMPTLIYVTHHTEEILPVFSHTLLLRRGQVVQSGLTSEVLTAGVLSDFFE 240 I ++A PTLIYVTHH EEILP F+HTLLL+ G+V Q+G T EVLTA L+ FF Sbjct: 181 AMIEQIAKQPNGPTLIYVTHHIEEILPCFTHTLLLKAGEVDQAGKTDEVLTAERLTSFFG 240 Query: 241 SEVIVERHGERVYV 254 V ++R R +V Sbjct: 241 VPVHIQRSQGRSWV 254 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,550,282,101 Number of extensions: 63889786 Number of successful extensions: 466310 Number of sequences better than 1.0e-05: 75502 Number of HSP's gapped: 388489 Number of HSP's successfully gapped: 80232 Length of query: 259 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 126 Effective length of database: 1,807,701,208 Effective search space: 227770352208 Effective search space used: 227770352208 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)