BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0105.0005.p (423 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K4S5.1 B3K4S5_9BACI Extracellular solute-binding protein family 1 478 e-133 B3KDP7.1 B3KDP7_9BACI Extracellular solute-binding protein family 1 454 e-125 A6CLU8.1 A6CLU8_9BACI Multiple sugar-binding transport system mu... 414 e-113 Q2BAB2.1 Q2BAB2_9BACI Multiple sugar-binding transport system mu... 407 e-111 B1YJN7.1 B1YJN7_EXIS2 Extracellular solute-binding protein family 1 402 e-110 >B3K4S5.1 B3K4S5_9BACI Extracellular solute-binding protein family 1 Length = 429 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 224/389 (57%), Positives = 295/389 (75%) Query: 35 KTVHIYQFKVEISEALAKLKTEFEKEHPDIRLEIQSVGGGSDYGASLRAKFSSGDEPDIF 94 KT+ I+QFKVEI+EAL KLK E+EKEHP I+L+IQ+VGGGSDYGA+L+AKF+SGDEPDIF Sbjct: 41 KTIKIFQFKVEIAEALNKLKAEYEKEHPGIKLDIQTVGGGSDYGAALKAKFASGDEPDIF 100 Query: 95 TIGGNNERDMWLEYLEDLSGEAWAKDVKPLAAEQMTVNGKLYGMPMNLEGYGFIYNKDLF 154 +GG + + W E +EDLS + W KDV +A E MT +GKLYG PM +EGYGFIYNKDLF Sbjct: 101 NVGGYRDLETWFENVEDLSDQPWVKDVVDVAKEPMTKDGKLYGQPMTIEGYGFIYNKDLF 160 Query: 155 KQAGITQKPXXXXXXXXXXXXXXXXGITPFANGYQEWFVLGNHNVNVAFAQQPDPESFIA 214 +QAGIT+ P GITPF NGYQE ++L NH +N+ FA Q DP++F+ Sbjct: 161 EQAGITELPKTLTELEEAAKKLQAAGITPFVNGYQETWILANHLLNIPFAHQEDPDAFVK 220 Query: 215 GLTDGSKHFAGDPVFSKWLDLLDLTVEYGNKNPLSTDYNTQVTMVASGEAAMMQQGNWTQ 274 G+ +G++ G+ F +W+ L DLTV+YG KNPL+TDYNT++T ASGEAAM Q GNWTQ Sbjct: 221 GMNEGTEKLVGNAKFDEWMRLFDLTVQYGQKNPLTTDYNTEITTFASGEAAMTQNGNWTQ 280 Query: 275 GQIDGIDPDLNLGILPMPIDDTPEDNDKLYVGVPSNWVVNKFSPVKEEAKVFLDWLVTSE 334 QIDGI+PDLN+G+LPMPI+D E+NDKL VGVP+NWVVN S VK+EAK FL+WLVTSE Sbjct: 281 VQIDGINPDLNIGLLPMPINDNAEENDKLPVGVPNNWVVNNKSKVKDEAKEFLNWLVTSE 340 Query: 335 TGKKYITKEFQFIPALDSIQGTKEDLGALGSEVLEYTDKDQALTWNWSRLPNGMPQELSS 394 TGK+YIT+EF+FIPAL SI+ E LG LG++V++Y+ +++AL+W +++ P+G E S Sbjct: 341 TGKRYITEEFKFIPALTSIEANSETLGDLGNDVMKYSQENKALSWEFNKFPDGGMNEFGS 400 Query: 395 NIQGYLGGKLTKEGMLKEFQVNWDNLSVQ 423 +QGY+ G + K + + Q +WD+L + Sbjct: 401 QMQGYVAGNVDKTQLFEGIQKSWDSLKAK 429 >B3KDP7.1 B3KDP7_9BACI Extracellular solute-binding protein family 1 Length = 428 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 214/391 (54%), Positives = 286/391 (73%) Query: 31 AGGIKTVHIYQFKVEISEALAKLKTEFEKEHPDIRLEIQSVGGGSDYGASLRAKFSSGDE 90 +G +KTV I+QFK EI + L +LK EFEKE+P+I+L+IQ+VGGG+DYGA+L+ KF+S D Sbjct: 37 SGEVKTVKIFQFKTEIVDGLNELKVEFEKEYPNIKLDIQTVGGGADYGAALKTKFASNDA 96 Query: 91 PDIFTIGGNNERDMWLEYLEDLSGEAWAKDVKPLAAEQMTVNGKLYGMPMNLEGYGFIYN 150 PDIF+ GG+ E +MW++ LEDLS + W D+ +A E MT +GK+YGMPMNLEG+G+IYN Sbjct: 97 PDIFSNGGDAEMEMWIDRLEDLSDQPWVNDLVDMAKEPMTKDGKVYGMPMNLEGWGYIYN 156 Query: 151 KDLFKQAGITQKPXXXXXXXXXXXXXXXXGITPFANGYQEWFVLGNHNVNVAFAQQPDPE 210 KDLF+QAGIT+ P GITPFAN YQEW+++GN +N AFAQQ DP Sbjct: 157 KDLFEQAGITELPKTYTQLADAAKKLEAAGITPFANAYQEWWLIGNQGINPAFAQQDDPN 216 Query: 211 SFIAGLTDGSKHFAGDPVFSKWLDLLDLTVEYGNKNPLSTDYNTQVTMVASGEAAMMQQG 270 +FI GL DG++ F G+ F +W L+ LT+++GNKNPL+TDYNT ++++A+G+AAMMQ G Sbjct: 217 AFIQGLNDGTQKFVGNGKFEEWTKLMQLTLDHGNKNPLTTDYNTAISLLATGKAAMMQNG 276 Query: 271 NWTQGQIDGIDPDLNLGILPMPIDDTPEDNDKLYVGVPSNWVVNKFSPVKEEAKVFLDWL 330 NW Q +ID I+PDLNLG LPMP+ D E NDKL VGVP+N V+NK S KEEAK+FL+W Sbjct: 277 NWAQTEIDAINPDLNLGYLPMPLGDNAEQNDKLNVGVPANLVINKDSASKEEAKIFLNWF 336 Query: 331 VTSETGKKYITKEFQFIPALDSIQGTKEDLGALGSEVLEYTDKDQALTWNWSRLPNGMPQ 390 VTS+ GK+YI K+F+FIPAL +I+ T ED+G LGS V EY + L ++ P+G Q Sbjct: 337 VTSDIGKEYIVKKFKFIPALKTIEATPEDMGDLGSAVWEYVQAGKVLPRQSAKFPDGAAQ 396 Query: 391 ELSSNIQGYLGGKLTKEGMLKEFQVNWDNLS 421 E S +Q + GK ML++ Q +WD+LS Sbjct: 397 EFSGAMQAFFAGKSDTNKMLEDMQTSWDSLS 427 >A6CLU8.1 A6CLU8_9BACI Multiple sugar-binding transport system multiple sugar-binding protein Length = 446 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/393 (51%), Positives = 279/393 (70%), Gaps = 4/393 (1%) Query: 29 DEAGGIKTVHIYQFKVEISEALAKLKTEFEKEHPDIRLEIQSVGGGSDYGASLRAKFSSG 88 D + T++ +QFKVEI++ LA++ EFE EHP+I++++++VGGG+DYGA L+AKF+SG Sbjct: 56 DSGEEVVTLNFFQFKVEIADQLAEMIKEFEAEHPNIKVKLETVGGGADYGAGLKAKFASG 115 Query: 89 DEPDIFTIGGNNERDMWLEYLEDLSGEAWAKDVKPLAAEQMT-VNGKLYGMPMNLEGYGF 147 +EPDIF GG E ++W E L DLS E W + V P+ MT +GKLYGMP+NLEGYGF Sbjct: 116 EEPDIFNNGGFKELELWKEKLADLSDEPWVEHVLPIGKVPMTDEDGKLYGMPVNLEGYGF 175 Query: 148 IYNKDLFKQAGITQKPXXXXXXXXXXXXXXXXGITPFANGYQEWFVLGNHNVNVAFAQQP 207 +YNKDLF++AGIT+ P GITPF+ GY EW+V+G H +N+ FAQQ Sbjct: 176 VYNKDLFEKAGITEPPGTIDELKDASEKLEAAGITPFSAGYGEWWVIGQHLLNIPFAQQE 235 Query: 208 DPESFIAGLTDGSKHFAGDPVFSKWLDLLDLTVEYGNKNPLSTDYNTQVTMVASGEAAMM 267 DP +FI GL DGS+ G+ F ++ ++LD ++Y N NPL+TDYNTQVT+ ASGE AM+ Sbjct: 236 DPVAFIEGLYDGSETIVGNEKFKQFKEVLDTELKYANDNPLTTDYNTQVTLFASGETAML 295 Query: 268 QQGNWTQGQIDGIDPDLNLGILPMPIDDTPEDNDKLYVGVPSNWVVNKFSPVKEEAKVFL 327 QQGNWT+ I I+PD+N+G LP+PI + + D+L VGVP+NWV+NK S EEAK FL Sbjct: 296 QQGNWTENMIYEINPDMNMGFLPIPISND-DSADRLPVGVPNNWVLNKNSEHLEEAKTFL 354 Query: 328 DWLVTSETGKKYITKEFQFIPALDSIQGTKEDLGALGSEVLEYTDKDQALTWNWSRLPNG 387 +W+VTSETGK+YIT+EF FIPA D+I+ LG LG +LE++ +++ + W W R P+G Sbjct: 355 EWMVTSETGKRYITEEFSFIPAFDNIEPA--GLGDLGQSILEFSKEEKTIPWTWFRWPDG 412 Query: 388 MPQELSSNIQGYLGGKLTKEGMLKEFQVNWDNL 420 +E ++ IQ Y GK+ + +L+ FQ WDNL Sbjct: 413 ANKEFAAAIQEYAAGKIDYDTLLERFQTTWDNL 445 >Q2BAB2.1 Q2BAB2_9BACI Multiple sugar-binding transport system multiple sugar-binding protein Length = 429 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/386 (49%), Positives = 281/386 (72%), Gaps = 4/386 (1%) Query: 36 TVHIYQFKVEISEALAKLKTEFEKEHPDIRLEIQSVGGGSDYGASLRAKFSSGDEPDIFT 95 T++++QFKVEI++ L ++ TEFE EHP+I++++++VGGG+DYGA+L+AKF+SG++PDIF Sbjct: 46 TLNLFQFKVEIADQLQEMITEFEAEHPNIKVKLETVGGGADYGAALKAKFASGEQPDIFN 105 Query: 96 IGGNNERDMWLEYLEDLSGEAWAKDVKPLAAEQMT-VNGKLYGMPMNLEGYGFIYNKDLF 154 GG E ++W E+L DLS E W + + P+ MT +GKLYGMP+NLEGYGF+YNKDLF Sbjct: 106 NGGFKELELWKEHLADLSNEPWVEHLLPIGKVPMTDTDGKLYGMPVNLEGYGFVYNKDLF 165 Query: 155 KQAGITQKPXXXXXXXXXXXXXXXXGITPFANGYQEWFVLGNHNVNVAFAQQPDPESFIA 214 ++AGI + P G TPF+ GY EW+V+G H +N+ FAQQ DP +FI Sbjct: 166 EKAGIKEPPANITELKDAAEKLKDSGTTPFSAGYGEWWVIGQHLLNIPFAQQEDPIAFIE 225 Query: 215 GLTDGSKHFAGDPVFSKWLDLLDLTVEYGNKNPLSTDYNTQVTMVASGEAAMMQQGNWTQ 274 GL DG++ F + F ++ ++LD + +GN NPL+TDYNTQVT A+G+ AM+QQGNWT+ Sbjct: 226 GLYDGTEKFTDNEQFKQFKEVLDTEINFGNDNPLTTDYNTQVTQFAAGQTAMLQQGNWTE 285 Query: 275 GQIDGIDPDLNLGILPMPIDDTPEDNDKLYVGVPSNWVVNKFSPVKEEAKVFLDWLVTSE 334 I ++PD+N+G LP+PI D ++ D+L VGVP+NWV+NK S +EAK+FL+W+V+S+ Sbjct: 286 NMIYEVNPDMNMGFLPIPISDD-KNADRLPVGVPNNWVLNKNSEHLDEAKLFLEWMVSSD 344 Query: 335 TGKKYITKEFQFIPALDSIQGTKEDLGALGSEVLEYTDKDQALTWNWSRLPNGMPQELSS 394 TGK+Y+T+EF FIPA D+I+ + LG LG +LEY+ +++ + W W R P+G +E ++ Sbjct: 345 TGKRYLTEEFAFIPAFDNIEASG--LGDLGQSILEYSKEEKTIPWTWFRWPDGANKEFAA 402 Query: 395 NIQGYLGGKLTKEGMLKEFQVNWDNL 420 +IQ Y GK+ + +L+ FQ WDNL Sbjct: 403 SIQEYAAGKIDYDTLLERFQKTWDNL 428 >B1YJN7.1 B1YJN7_EXIS2 Extracellular solute-binding protein family 1 Length = 428 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/385 (48%), Positives = 268/385 (69%), Gaps = 3/385 (0%) Query: 36 TVHIYQFKVEISEALAKLKTEFEKEHPDIRLEIQSVGGGSDYGASLRAKFSSGDEPDIFT 95 T++++QFK EI++ + K+ +EKE +++ +Q+VGGGSDYGA+L+++F+SG+EPD+F Sbjct: 45 TLNVFQFKAEIAKDMEKMAKAYEKET-GVKVVVQTVGGGSDYGAALKSQFASGNEPDVFN 103 Query: 96 IGGNNERDMWLEYLEDLSGEAWAKDVKPLAAEQMTVNGKLYGMPMNLEGYGFIYNKDLFK 155 GG E W + LEDLS E W D+ L+ E MT++GKLYGMPMNLEGYGFIYNK++FK Sbjct: 104 NGGFTEAKTWQDKLEDLSDEKWVSDLTDLSKEPMTIDGKLYGMPMNLEGYGFIYNKEIFK 163 Query: 156 QAGITQKPXXXXXXXXXXXXXXXXGITPFANGYQEWFVLGNHNVNVAFAQQPDPESFIAG 215 +AGIT+ P G+TPF+ GY EW++LGNH +N+ AQQ DP+ FIA Sbjct: 164 KAGITELPKTLTELTEASKKLKADGVTPFSIGYGEWWILGNHLMNIPMAQQDDPDQFIAD 223 Query: 216 LTDGSKHFAGDPVFSKWLDLLDLTVEYGNKNPLSTDYNTQVTMVASGEAAMMQQGNWTQG 275 L G F + F ++++L DLT+EYGNKNPL+TDYNTQV+ A G+ AM+QQGNW Q Sbjct: 224 LNSGKGKFEDNKQFKEFMNLFDLTIEYGNKNPLTTDYNTQVSQFAEGKTAMIQQGNWAQQ 283 Query: 276 QIDGIDPDLNLGILPMPIDDTPEDNDKLYVGVPSNWVVNKFSPVKEEAKVFLDWLVTSET 335 I ++PD+ +G +PMPI+D E D+L VGVP+NWVVNK S KEE K FL+W+ TS+T Sbjct: 284 LITDVNPDIEMGFIPMPINDDKEKMDRLPVGVPNNWVVNKNSKNKEEGKKFLEWMATSDT 343 Query: 336 GKKYITKEFQFIPALDSIQGTKEDLGALGSEVLEYTDKDQALTWNWSRLPNGMPQELSSN 395 GK Y+ +F+FIPA SI+ DLG L ++++Y+ +D+ ++WNW + P+G E + Sbjct: 344 GKDYMVNKFKFIPAFKSIEAA--DLGPLADDIIKYSKEDKTISWNWFKYPDGAVNEFGAI 401 Query: 396 IQGYLGGKLTKEGMLKEFQVNWDNL 420 +Q Y+G + T E ML++F W + Sbjct: 402 MQAYVGKQKTSEEMLQDFTKTWQKM 426 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,571,465,816 Number of extensions: 114089068 Number of successful extensions: 199175 Number of sequences better than 1.0e-05: 457 Number of HSP's gapped: 199338 Number of HSP's successfully gapped: 475 Length of query: 423 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 285 Effective length of database: 1,760,596,133 Effective search space: 501769897905 Effective search space used: 501769897905 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)