BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0105.0001.p (191 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9L5.1 B1D9L5_9BACL Putative uncharacterized protein 135 2e-30 B1DE83.1 B1DE83_9BACL Putative uncharacterized protein 129 1e-28 Q2BET6.1 Q2BET6_9BACI Putative uncharacterized protein 95 3e-18 B3KC52.1 B3KC52_9BACI Putative uncharacterized protein 94 5e-18 B1DFE1.1 B1DFE1_9BACL Putative uncharacterized protein 91 6e-17 >B1D9L5.1 B1D9L5_9BACL Putative uncharacterized protein Length = 227 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 1/169 (0%) Query: 1 MFVERVWWPIFGHMDDLHPEYEVSDWRGRPYFVDLVWKPGQVKFAIEIKGYGPHVQQTDR 60 +F++ VWWP+ G+ + LHPEYEV DW + FVD + P Q FAIE G+ HV+ DR Sbjct: 40 LFLQNVWWPLLGNFEHLHPEYEVYDWNRKSQFVDFAYLPPQGMFAIECDGFQSHVKDMDR 99 Query: 61 TRYRQELNRETYLQIAGYRVVAVPYDDLEAAPELTISLFKSLLAPCMLKNAEGEGRPYT- 119 R+ LNR+T+L G++++ +DD++ PE+ + L K +L +++ + Sbjct: 100 ERFSYSLNRDTFLTGMGWKMIHFSFDDVQNHPEICMMLLKHVLGTHIIRGRQNVASLLVP 159 Query: 120 RLESDILRLAARWNGSIRPVDLVNELGVNPRTVKKLMNSLCVKGRFRPI 168 E DILR A G + P DL + G++ RT +K + SL KG +PI Sbjct: 160 SAERDILRFAFHMGGRVGPKDLSDHFGISFRTARKRLQSLSAKGMLKPI 208 >B1DE83.1 B1DE83_9BACL Putative uncharacterized protein Length = 223 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Query: 1 MFVERVWWPIFGHMDDLHPEYEVSDWRGRPYFVDLVWKPGQVKFAIEIKGYGPHVQQTDR 60 + ++ VWWP+FG + LHPEYEV DW + F+D + P KF IE G+ HV+ DR Sbjct: 37 LILQNVWWPLFGSFEHLHPEYEVYDWNRKSQFLDFAFLPPYGKFGIECDGFQSHVKDMDR 96 Query: 61 TRYRQELNRETYLQIAGYRVVAVPYDDLEAAPELTISLFKSLLAPCMLKNAEGEGRPYTR 120 ++ LNR+T+L+ G+ ++ +DD++ PE+ L + ++ P ++ +A P Sbjct: 97 EKFSYSLNRDTFLKGMGWTMIHFSFDDVQNRPEICRMLLQGIINPRLIHSAPSPD-PVQL 155 Query: 121 LESDILRLAARWNGSIRPVDLVNELGVNPRTVKKLMNSLCVKGRFRPILAPGSNRVCRYE 180 LE +ILR A + + IRP D+++ L V+ RT + + +L KG +PI++ ++ RYE Sbjct: 156 LEKEILRYAFQLSRPIRPKDIIDYLQVDFRTARNKLQTLSNKGLLKPIIS--GTQIRRYE 213 >Q2BET6.1 Q2BET6_9BACI Putative uncharacterized protein Length = 243 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 6/180 (3%) Query: 1 MFVERVWWPIFGHMDDLHPEYEVSDWRGRPYFVDLVW-KPGQVKFAIEIKGYGPHVQQTD 59 +F+++VWWP+F + LHPEYE+ ++ ++D + +PG +K +E+ GYGPH++ Sbjct: 59 LFLKQVWWPVFYQFNYLHPEYEIDNYNDGKRYLDFAYIRPG-IKVCLEVDGYGPHLKNIS 117 Query: 60 RTRYRQELNRETYLQIAGYRVVAVPYDDLEAAPELTISLFKSLLAPCMLKNAEGEGRPYT 119 R ++ L R+ L I + V+ +D ++ P + + ++ M E + + Sbjct: 118 RWQFSDSLERQNQLVIDRWTVIRFSFDQVKENPRRCQQVVQQVIGRWM--GDELDQTSLS 175 Query: 120 RLESDILRLAARWNGSIRPVDLVNELGVNPRTVKKLMNSLCVKGRFRPILAPGSNRVCRY 179 LE ++LRL R I P ++ L ++ +TVKK+++ L K P A G+ R+ Y Sbjct: 176 FLEKEVLRLVIRKGEDISPKEVEKYLKLSAKTVKKVLSQLVEKKMLIP--ASGTQRIRSY 233 >B3KC52.1 B3KC52_9BACI Putative uncharacterized protein Length = 215 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 5/179 (2%) Query: 2 FVERVWWPIFGHMDDLHPEYEVSDWRGRPYFVDLVWKPGQVKFAIEIKGYGPHVQQTDRT 61 F+ VW+P GH +DLHPE+EV D+ ++DL + PG + IEI+GYGPH + D Sbjct: 39 FLRSVWFPAIGHFNDLHPEWEVRDFSNGYRYLDLAYMPGDARGGIEIQGYGPHARDLDVR 98 Query: 62 RYRQELNRETYLQIAGYRVVAVPYDDLEAAPELTISLFKSLLAPCMLKNAEGEGRPYTRL 121 R++ R L + G+ + + Y + P+ L S + + + + L Sbjct: 99 RFKDLCRRHCLLALDGWTFLPIAYPSIVEEPKQCQQLILSFVGRFVATDVPAS---LSWL 155 Query: 122 ESDILRLAARWNGSIRPVDLVNELGVNPRTVKKLMNSLCVKGRFRPILAPGSNRVCRYE 180 E++ +R A R I P++L N L V+ R ++L++ L V+ R I A G R Y+ Sbjct: 156 EAEAVRFARRLLRPITPLELANHLRVSDRHTRRLLHKL-VELRILDI-ASGEQRARTYK 212 >B1DFE1.1 B1DFE1_9BACL Putative uncharacterized protein Length = 225 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 14/185 (7%) Query: 1 MFVERVWWPIFGHMDDLHPEYEVSDWRGRPYFVDLVWKPGQVKFAIEIKGYGPHVQQTDR 60 +F++ VW+ F + ++LHPEY+V+D+R ++D + +K +IEI G+GPH+ Q R Sbjct: 36 LFLKNVWFTAFRNFENLHPEYKVADFRDGARYLDFAYLKYPLKLSIEIDGFGPHLSQASR 95 Query: 61 TRYRQELNRETYLQIAGYRVVAVPYDDLEAAPELTISLFKSLLAPCMLKNAEGEGRPYTR 120 + + R+ +L I G+R++ YDD+ P + + + ++ + R YT Sbjct: 96 NHFSDDRIRQNHLVIDGWRILRFSYDDICDRPRMCEQIVQQFMSTWL-------DRHYTE 148 Query: 121 LESD------ILRLAARWNGSIRPVDLVNELGVNPRTVKKLMNSLCVKGRFRPILAPGSN 174 SD +LRLA R +R ++ L V+ T + ++ L P G Sbjct: 149 RSSDAIIQHEVLRLALRTEKPLRAREVSTYLTVHIETARSILRELAKLNLLLPC-GGGKQ 207 Query: 175 RVCRY 179 RV Y Sbjct: 208 RVHSY 212 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.141 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,239,123,014 Number of extensions: 49827831 Number of successful extensions: 103653 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 103649 Number of HSP's successfully gapped: 8 Length of query: 191 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 63 Effective length of database: 1,854,806,283 Effective search space: 116852795829 Effective search space used: 116852795829 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 127 (53.5 bits)