BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0103.0009.p
         (123 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q81XU0.1 Q81XU0_BACAN Putative uncharacterized protein                 64   5e-09
C3P4X2.1 C3P4X2_BACAA Putative uncharacterized protein                 64   5e-09
C3L8A2.1 C3L8A2_BACAC Putative uncharacterized protein                 64   5e-09
B3JCI6.1 B3JCI6_BACAN Putative uncharacterized protein                 64   5e-09
B0AX63.1 B0AX63_BACAN Putative uncharacterized protein                 64   5e-09

>Q81XU0.1 Q81XU0_BACAN Putative uncharacterized protein
          Length = 66

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 44/57 (77%)

Query: 60  YSEFGAEARKVMLQKKIKMKDVASELGVSVTYVSEIFKGTRPGERQKPLIAKMLGME 116
           YS FG E RKV+L++ + +  +ASEL +SV+Y+S+I KG+R G++QK  I ++LG++
Sbjct: 3   YSSFGIEVRKVLLERDLTLTVLASELKISVSYLSDILKGSRKGKKQKKAIVELLGLD 59


>C3P4X2.1 C3P4X2_BACAA Putative uncharacterized protein
          Length = 66

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 44/57 (77%)

Query: 60  YSEFGAEARKVMLQKKIKMKDVASELGVSVTYVSEIFKGTRPGERQKPLIAKMLGME 116
           YS FG E RKV+L++ + +  +ASEL +SV+Y+S+I KG+R G++QK  I ++LG++
Sbjct: 3   YSSFGIEVRKVLLERDLTLTVLASELKISVSYLSDILKGSRKGKKQKKAIVELLGLD 59


>C3L8A2.1 C3L8A2_BACAC Putative uncharacterized protein
          Length = 66

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 44/57 (77%)

Query: 60  YSEFGAEARKVMLQKKIKMKDVASELGVSVTYVSEIFKGTRPGERQKPLIAKMLGME 116
           YS FG E RKV+L++ + +  +ASEL +SV+Y+S+I KG+R G++QK  I ++LG++
Sbjct: 3   YSSFGIEVRKVLLERDLTLTVLASELKISVSYLSDILKGSRKGKKQKKAIVELLGLD 59


>B3JCI6.1 B3JCI6_BACAN Putative uncharacterized protein
          Length = 66

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 44/57 (77%)

Query: 60  YSEFGAEARKVMLQKKIKMKDVASELGVSVTYVSEIFKGTRPGERQKPLIAKMLGME 116
           YS FG E RKV+L++ + +  +ASEL +SV+Y+S+I KG+R G++QK  I ++LG++
Sbjct: 3   YSSFGIEVRKVLLERDLTLTVLASELKISVSYLSDILKGSRKGKKQKKAIVELLGLD 59


>B0AX63.1 B0AX63_BACAN Putative uncharacterized protein
          Length = 66

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 44/57 (77%)

Query: 60  YSEFGAEARKVMLQKKIKMKDVASELGVSVTYVSEIFKGTRPGERQKPLIAKMLGME 116
           YS FG E RKV+L++ + +  +ASEL +SV+Y+S+I KG+R G++QK  I ++LG++
Sbjct: 3   YSSFGIEVRKVLLERDLTLTVLASELKISVSYLSDILKGSRKGKKQKKAIVELLGLD 59


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.134    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 627,698,593
Number of extensions: 20836545
Number of successful extensions: 66854
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 66856
Number of HSP's successfully gapped: 10
Length of query: 123
Length of database: 3,060,696,203
Length adjustment: 89
Effective length of query: 34
Effective length of database: 2,222,225,868
Effective search space: 75555679512
Effective search space used: 75555679512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)