BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0103.0002.p (445 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q5YA97.1 Q5YA97_9CAUD 13 635 e-180 Q1CPU5.1 Q1CPU5_STRPB Chromosome segregation ATPases 588 e-166 Q9A0Q8.1 Q9A0Q8_STRP1 Putative uncharacterized protein 588 e-166 Q3D3Q0.1 Q3D3Q0_STRAG Chromosome segregation protein, putative 572 e-161 A6BEU2.1 A6BEU2_9FIRM Putative uncharacterized protein 558 e-157 >Q5YA97.1 Q5YA97_9CAUD 13 Length = 434 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 315/445 (70%), Positives = 363/445 (81%), Gaps = 11/445 (2%) Query: 1 MIKINKLEIENVKRVKAVKIEPTASGLTLVGGKNNQGKTSVLDAIAWALGGNKYRPSQAA 60 MIKINKLEIEN+KRVKAVKIEP+ +GLT++GG N QGKTS LDAIAWALGGNKYRPS A Sbjct: 1 MIKINKLEIENIKRVKAVKIEPSPNGLTVIGGGNGQGKTSTLDAIAWALGGNKYRPSMAE 60 Query: 61 REDSAIPPYLHLTLSNGLIVERKGKNSDLKVVDPNGQKGGQMLLDSFVEELAINLPKFMG 120 RE S IPPYL++TLSNGL+VERKGKNSDLKV+DPNG+KGGQ LL+SFVEELAI+LPKFM Sbjct: 61 REGSTIPPYLNVTLSNGLVVERKGKNSDLKVIDPNGEKGGQQLLNSFVEELAIDLPKFMN 120 Query: 121 STNKEKANILLQIIGVGQQLHELEVKEQEVYNRRHAIGQIADQKAKFAKEQTYFPDAPKE 180 ST+KEKANILL+IIGVG +L ELE E+E+YN+R IGQIADQK KFAKEQ Y+PDAPKE Sbjct: 121 STSKEKANILLRIIGVGDKLFELEKNEKEIYNQRRTIGQIADQKMKFAKEQPYYPDAPKE 180 Query: 181 PVSASDLIQQQQAILARNGENQLKRQRLTQFQALYANQGQEVERLKAMLADAEAKYAQTG 240 P+SASDLI QQQ ILARNGENQ KRQ+L Q Q Y +GQEVERL+ L +AE YA G Sbjct: 181 PISASDLINQQQEILARNGENQRKRQQLAQIQHQYTAKGQEVERLRQQLQEAEQAYAALG 240 Query: 241 VXXXXXXXXXXXXHDESTAELETNIQQIDEINRKVRANLDKDKAETDASDYRQQYDALTT 300 DEST EL+ NIQQIDEINRKVRANLDKDKAETDA+DYR QY+ L+ Sbjct: 241 EDLEIAQKDTLDLVDESTEELQANIQQIDEINRKVRANLDKDKAETDANDYRAQYEKLSK 300 Query: 301 EINTVRQQKTDLLTNADLPLPGLTVENGELKYNGQCWDNMSGSDQLKVATAIVRRLKPEC 360 +I VR+++T+LL NADLPLPGL+V +G+L YNGQ WDNMSG+DQL+V+TAIVR+LKP C Sbjct: 301 QIEEVRKKRTELLDNADLPLPGLSVADGDLIYNGQKWDNMSGADQLRVSTAIVRKLKPNC 360 Query: 361 GFILLDKLEQMDMDTLQEFGAWLEQEGLQAIATRVSTGEECSIIIEDGYVAGQEGVTLQQ 420 GFILLDKLEQMD+ TL+EFG WLE+EGLQAIATRVSTGEECSIIIEDGYVAGQ+ + ++ Sbjct: 361 GFILLDKLEQMDLQTLKEFGEWLEKEGLQAIATRVSTGEECSIIIEDGYVAGQKIIEQKE 420 Query: 421 LPGEIDPGDGWNEAVAPPTWKAGEF 445 +A P WK GEF Sbjct: 421 -----------QQATQVPKWKPGEF 434 >Q1CPU5.1 Q1CPU5_STRPB Chromosome segregation ATPases Length = 446 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 299/444 (67%), Positives = 349/444 (78%), Gaps = 7/444 (1%) Query: 2 IKINKLEIENVKRVKAVKIEPTASGLTLVGGKNNQGKTSVLDAIAWALGGNKYRPSQAAR 61 I INKLEIENVKR+KAVKIEP+A+GLT++GG NNQGKTSVLDAIAWALGGNKY+PSQA R Sbjct: 10 ITINKLEIENVKRIKAVKIEPSATGLTIIGGNNNQGKTSVLDAIAWALGGNKYKPSQAMR 69 Query: 62 EDSAIPPYLHLTLSNGLIVERKGKNSDLKVVDPNGQKGGQMLLDSFVEELAINLPKFMGS 121 E S +PP L +T+SNGLIVERKGKN+ LKV+DPNGQKGGQ LLDSFVEELAINLPKFM S Sbjct: 70 EGSQVPPTLKITMSNGLIVERKGKNASLKVIDPNGQKGGQQLLDSFVEELAINLPKFMDS 129 Query: 122 TNKEKANILLQIIGVGQQLHELEVKEQEVYNRRHAIGQIADQKAKFAKEQTYFPDAPKEP 181 T KEKA++LL+IIGVG QL ELE+KE+E+YN+RHAIG IADQK KFAKE TY+PDAPK+ Sbjct: 130 TPKEKADVLLEIIGVGDQLAELELKEKEIYNQRHAIGVIADQKEKFAKEMTYYPDAPKQL 189 Query: 182 VSASDLIQQQQAILARNGENQLKRQRLTQFQALYANQGQEVERLKAMLADAEAKYAQTGV 241 VS S+LIQQ QAILA+NGEN KRQ + + + Y EV+RL+ +LADAEAK + Sbjct: 190 VSISELIQQHQAILAKNGENAQKRQNVERIRYDYNQSILEVDRLRKLLADAEAKTNKLSE 249 Query: 242 XXXXXXXXXXXXHDESTAELETNIQQIDEINRKVRANLDKDKAETDASDYRQQYDALTTE 301 HDESTAE+E NI IDE+NRKVRAN DKDKAE DA R+QY+ LT + Sbjct: 250 DLKIANTDAMDLHDESTAEIEANIADIDEVNRKVRANFDKDKAEEDAKQQREQYNILTND 309 Query: 302 INTVRQQKTDLLTNADLPLPGLTVENGELKYNGQCWDNMSGSDQLKVATAIVRRLKPECG 361 I ++RQQK DLL NADLPL GL+V++G+L Y GQ WDNMSGS QL VATAIVR+LKP+CG Sbjct: 310 IESIRQQKRDLLINADLPLEGLSVDDGKLLYLGQEWDNMSGSQQLIVATAIVRKLKPDCG 369 Query: 362 FILLDKLEQMDMDTLQEFGAWLEQEGLQAIATRVSTGEECSIIIEDGYVAGQEGVTLQQL 421 F+L+DKLEQMD TL++FG LEQEGLQAIATRVS GEEC+IIIEDGY + + Sbjct: 370 FVLIDKLEQMDNITLEQFGKRLEQEGLQAIATRVSIGEECAIIIEDGYSVENKAHNFKTA 429 Query: 422 PGEIDPGDGWNEAVAPPTWKAGEF 445 G + E VA PTWK GEF Sbjct: 430 -----EGGNFAETVA-PTWK-GEF 446 >Q9A0Q8.1 Q9A0Q8_STRP1 Putative uncharacterized protein Length = 439 Score = 588 bits (1515), Expect = e-166, Method: Compositional matrix adjust. Identities = 299/444 (67%), Positives = 349/444 (78%), Gaps = 7/444 (1%) Query: 2 IKINKLEIENVKRVKAVKIEPTASGLTLVGGKNNQGKTSVLDAIAWALGGNKYRPSQAAR 61 I INKLEIENVKR+KAVKIEP+A+GLT++GG NNQGKTSVLDAIAWALGGNKY+PSQA R Sbjct: 3 ITINKLEIENVKRIKAVKIEPSATGLTIIGGNNNQGKTSVLDAIAWALGGNKYKPSQAMR 62 Query: 62 EDSAIPPYLHLTLSNGLIVERKGKNSDLKVVDPNGQKGGQMLLDSFVEELAINLPKFMGS 121 E S +PP L +T+SNGLIVERKGKN+ LKV+DPNGQKGGQ LLDSFVEELAINLPKFM S Sbjct: 63 EGSQVPPTLKITMSNGLIVERKGKNASLKVIDPNGQKGGQQLLDSFVEELAINLPKFMDS 122 Query: 122 TNKEKANILLQIIGVGQQLHELEVKEQEVYNRRHAIGQIADQKAKFAKEQTYFPDAPKEP 181 T KEKA++LL+IIGVG QL ELE+KE+E+YN+RHAIG IADQK KFAKE TY+PDAPK+ Sbjct: 123 TPKEKADVLLEIIGVGDQLAELELKEKEIYNQRHAIGVIADQKEKFAKEMTYYPDAPKQL 182 Query: 182 VSASDLIQQQQAILARNGENQLKRQRLTQFQALYANQGQEVERLKAMLADAEAKYAQTGV 241 VS S+LIQQ QAILA+NGEN KRQ + + + Y EV+RL+ +LADAEAK + Sbjct: 183 VSISELIQQHQAILAKNGENAQKRQNVERIRYDYNQSILEVDRLRKLLADAEAKTNKLSE 242 Query: 242 XXXXXXXXXXXXHDESTAELETNIQQIDEINRKVRANLDKDKAETDASDYRQQYDALTTE 301 HDESTAE+E NI IDE+NRKVRAN DKDKAE DA R+QY+ LT + Sbjct: 243 DLKIANTDAMDLHDESTAEIEANIADIDEVNRKVRANFDKDKAEEDAKQQREQYNILTND 302 Query: 302 INTVRQQKTDLLTNADLPLPGLTVENGELKYNGQCWDNMSGSDQLKVATAIVRRLKPECG 361 I ++RQQK DLL NADLPL GL+V++G+L Y GQ WDNMSGS QL VATAIVR+LKP+CG Sbjct: 303 IESIRQQKRDLLINADLPLEGLSVDDGKLLYLGQEWDNMSGSQQLIVATAIVRKLKPDCG 362 Query: 362 FILLDKLEQMDMDTLQEFGAWLEQEGLQAIATRVSTGEECSIIIEDGYVAGQEGVTLQQL 421 F+L+DKLEQMD TL++FG LEQEGLQAIATRVS GEEC+IIIEDGY + + Sbjct: 363 FVLIDKLEQMDNITLEQFGKRLEQEGLQAIATRVSIGEECAIIIEDGYSVENKAHNFKTA 422 Query: 422 PGEIDPGDGWNEAVAPPTWKAGEF 445 G + E VA PTWK GEF Sbjct: 423 -----EGGNFAETVA-PTWK-GEF 439 >Q3D3Q0.1 Q3D3Q0_STRAG Chromosome segregation protein, putative Length = 439 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 288/442 (65%), Positives = 343/442 (77%), Gaps = 6/442 (1%) Query: 2 IKINKLEIENVKRVKAVKIEPTASGLTLVGGKNNQGKTSVLDAIAWALGGNKYRPSQAAR 61 I INKLEIENVKR+KAVK+EP++ GLT++GG NNQGKTSVLD+IAW LGGNK++PSQAAR Sbjct: 3 ITINKLEIENVKRIKAVKVEPSSKGLTIIGGNNNQGKTSVLDSIAWVLGGNKFKPSQAAR 62 Query: 62 EDSAIPPYLHLTLSNGLIVERKGKNSDLKVVDPNGQKGGQMLLDSFVEELAINLPKFMGS 121 E + +PP L +T+SNGLIVERKGKNS LKV+DPNGQKGGQ LLDSFVEELAINLPKFM Sbjct: 63 EGTMVPPTLKITMSNGLIVERKGKNSSLKVIDPNGQKGGQQLLDSFVEELAINLPKFMDG 122 Query: 122 TNKEKANILLQIIGVGQQLHELEVKEQEVYNRRHAIGQIADQKAKFAKEQTYFPDAPKEP 181 T KEKA++LL+IIGVG QL ELE+KE+E+YN+RH IG IADQK KFAKEQ Y+ DAPKE Sbjct: 123 TPKEKADVLLEIIGVGDQLAELELKEKELYNQRHTIGVIADQKEKFAKEQPYYNDAPKEL 182 Query: 182 VSASDLIQQQQAILARNGENQLKRQRLTQFQALYANQGQEVERLKAMLADAEAKYAQTGV 241 +S +DLIQQQQ +LA+NGEN KRQ L+ Q + + EVE LK LA AE + + Sbjct: 183 ISIADLIQQQQEVLAKNGENARKRQNLSVIQQNHQFKQSEVEHLKQQLATAEKQLQELSS 242 Query: 242 XXXXXXXXXXXXHDESTAELETNIQQIDEINRKVRANLDKDKAETDASDYRQQYDALTTE 301 DESTAE+E NI I+E+NRKVRANLDKDKAE DA R+QY+ LT + Sbjct: 243 DLEIAQRDTMSLIDESTAEIEENISNIEEVNRKVRANLDKDKAEEDAKHQREQYNILTND 302 Query: 302 INTVRQQKTDLLTNADLPLPGLTVENGELKYNGQCWDNMSGSDQLKVATAIVRRLKPECG 361 I ++RQQK DLL NADLPL GL+V++G+L Y GQ WDNMSGS QL VATAIVR+LKP+CG Sbjct: 303 IESIRQQKRDLLINADLPLEGLSVDDGKLLYLGQEWDNMSGSQQLIVATAIVRKLKPDCG 362 Query: 362 FILLDKLEQMDMDTLQEFGAWLEQEGLQAIATRVSTGEECSIIIEDGYVAGQEGVTLQQL 421 F+L+DKLEQMD TL++FG WLEQEGLQAIATRVSTGEEC+IIIEDGY + + + Sbjct: 363 FVLIDKLEQMDNITLEQFGKWLEQEGLQAIATRVSTGEECAIIIEDGYSVENKAHSFKTA 422 Query: 422 PGEIDPGDGWNEAVAPPTWKAG 443 G + E VA PTW+ G Sbjct: 423 -----EGGSFAETVA-PTWQGG 438 >A6BEU2.1 A6BEU2_9FIRM Putative uncharacterized protein Length = 435 Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust. Identities = 283/444 (63%), Positives = 332/444 (74%), Gaps = 13/444 (2%) Query: 2 IKINKLEIENVKRVKAVKIEPTASGLTLVGGKNNQGKTSVLDAIAWALGGNKYRPSQAAR 61 IKINKLEIENVKR+KAVKIEPT +GLT+VGG NNQGKTSVLD+IAWALGG++Y+PS A R Sbjct: 5 IKINKLEIENVKRIKAVKIEPTKNGLTIVGGNNNQGKTSVLDSIAWALGGDRYKPSNATR 64 Query: 62 EDSAIPPYLHLTLSNGLIVERKGKNSDLKVVDPNGQKGGQMLLDSFVEELAINLPKFMGS 121 + S IPP LH+ +SNGL+VERKGKNS LKV DPNG KGGQ LL+ FVE+LA++LPKFM S Sbjct: 65 DGSTIPPNLHIVMSNGLVVERKGKNSSLKVTDPNGNKGGQQLLNDFVEQLALDLPKFMES 124 Query: 122 TNKEKANILLQIIGVGQQLHELEVKEQEVYNRRHAIGQIADQKAKFAKEQTYFPDAPKEP 181 + KEKA LL+IIGVG QL LE +E+E+YN R +G+ ADQK KFAKEQ Y+PDAPK+ Sbjct: 125 SGKEKAQTLLKIIGVGDQLTALEQQEKELYNERLYVGRTADQKVKFAKEQPYYPDAPKDL 184 Query: 182 VSASDLIQQQQAILARNGENQLKRQRLTQFQALYANQGQEVERLKAMLADAEAKYAQTGV 241 VS SDLI+QQQ ILARNG+N+ R+ +A Y + E+E L+ ML ++ Sbjct: 185 VSPSDLIKQQQEILARNGKNEEYRRNAVNMKAEYDSLNMEIENLRKMLQKKMERHEALSE 244 Query: 242 XXXXXXXXXXXXHDESTAELETNIQQIDEINRKVRANLDKDKAETDASDYRQQYDALTTE 301 HDESTAELE +I I+EINRKVRANLDKDKAE DA Y+ QY+ LT + Sbjct: 245 ALEAANKTVSELHDESTAELEASIANIEEINRKVRANLDKDKAEEDARAYQDQYNELTKK 304 Query: 302 INTVRQQKTDLLTNADLPLPGLTVENGELKYNGQCWDNMSGSDQLKVATAIVRRLKPECG 361 I VR QKT+LL ADLPLP L+V+ GEL Y GQ WDNMSGSD+LKV+TAIVR+L P+CG Sbjct: 305 IEGVRDQKTELLNAADLPLPELSVKEGELIYKGQQWDNMSGSDRLKVSTAIVRKLNPKCG 364 Query: 362 FILLDKLEQMDMDTLQEFGAWLEQEGLQAIATRVSTGEECSIIIEDGYVAGQEGVTLQQL 421 F+LLDKLEQMD+ TL EFG WLEQEGLQAIATRVSTG+ECSIIIEDGYV Sbjct: 365 FVLLDKLEQMDLVTLNEFGQWLEQEGLQAIATRVSTGDECSIIIEDGYVVK--------- 415 Query: 422 PGEIDPGDGWNEAVAPPTWKAGEF 445 D G EA A PTWKAG F Sbjct: 416 ----DLEAGKAEAPAAPTWKAGVF 435 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.131 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,531,691,933 Number of extensions: 105127016 Number of successful extensions: 256381 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 256405 Number of HSP's successfully gapped: 11 Length of query: 445 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 306 Effective length of database: 1,751,175,118 Effective search space: 535859586108 Effective search space used: 535859586108 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 133 (55.8 bits)