BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0015.p (209 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0C4D9.1 C0C4D9_9CLOT Putative uncharacterized protein 290 6e-77 B0NKF2.1 B0NKF2_EUBSP Putative uncharacterized protein 286 9e-76 Q185A0.1 Q185A0_CLOD6 ABC transporter, ATP-binding protein 280 5e-74 A5KPQ8.1 A5KPQ8_9FIRM Putative uncharacterized protein 251 4e-65 Q8CU34.1 Q8CU34_STAES ABC transporter (ATP-binding protein) 247 6e-64 >C0C4D9.1 C0C4D9_9CLOT Putative uncharacterized protein Length = 305 Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 136/189 (71%), Positives = 161/189 (85%) Query: 1 MFGLLGRNGAGKTTLMRVLATLLHKSGGSVTVCGIPIEQSKEVRKLIGYLPQDFSIYPGM 60 MFGLLGRNGAGKTTLM+VLATLL KS G + +CG+P+E + VR + GYLPQ+FS+YP M Sbjct: 44 MFGLLGRNGAGKTTLMKVLATLLPKSEGEINICGVPVEHAAAVRSMTGYLPQEFSMYPNM 103 Query: 61 TVYAAMNYLGILSELPKAARKERIFALLKRVNLEDCLNLKVKALSGGMKRRLGIAQAILH 120 TVY AM+YLG+LS L K RK++I LLKRVNL+D KVKALSGGMKRRLGIAQAILH Sbjct: 104 TVYEAMDYLGVLSGLSKGERKKKILGLLKRVNLQDDRKKKVKALSGGMKRRLGIAQAILH 163 Query: 121 DPQILIVDEPTAGLDPEERIRFRDLLCEIAENRIVILSTHIVEDIEKTCQNIAVLDKGQI 180 DP++LIVDEPTAGLDPEER+RFR+LLCEIAE RIVILSTHIV DIE TC+ +AVL+KG+I Sbjct: 164 DPKVLIVDEPTAGLDPEERVRFRNLLCEIAEERIVILSTHIVGDIEATCEQVAVLNKGEI 223 Query: 181 IYQGALQHF 189 IY+G++ Sbjct: 224 IYRGSVAEL 232 >B0NKF2.1 B0NKF2_EUBSP Putative uncharacterized protein Length = 292 Score = 286 bits (732), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 136/208 (65%), Positives = 171/208 (82%), Gaps = 2/208 (0%) Query: 1 MFGLLGRNGAGKTTLMRVLATLLHKSGGSVTVCGIPIEQSKEVRKLIGYLPQDFSIYPGM 60 MFGLLGRNGAGKTTLM+VLATLL KS G V++CGIP+E ++E+R+++GYLPQ+FS+YP M Sbjct: 31 MFGLLGRNGAGKTTLMKVLATLLKKSEGKVSICGIPVEDAREIRRIVGYLPQEFSMYPNM 90 Query: 61 TVYAAMNYLGILSELPKAARKERIFALLKRVNLEDCLNLKVKALSGGMKRRLGIAQAILH 120 TVY AM+YLG+LS + + +RK++I LL +VNL++ KVK LSGGMKRRLGIAQAILH Sbjct: 91 TVYEAMDYLGVLSGMDQKSRKQKIPKLLYKVNLQEDQKKKVKVLSGGMKRRLGIAQAILH 150 Query: 121 DPQILIVDEPTAGLDPEERIRFRDLLCEIAENRIVILSTHIVEDIEKTCQNIAVLDKGQI 180 DP+ILIVDEPTAGLDPEER+RFR+LLCEIA++RIVILSTHIV DIE TC++IAVLD+G + Sbjct: 151 DPKILIVDEPTAGLDPEERVRFRNLLCEIAKDRIVILSTHIVGDIEATCEDIAVLDEGSL 210 Query: 181 IYQGALQHFIGNERGLEEAYMKQMGEHQ 208 IYQG G + YM ++ + Sbjct: 211 IYQGTAAELTSLAEG--KVYMAEISRKE 236 >Q185A0.1 Q185A0_CLOD6 ABC transporter, ATP-binding protein Length = 290 Score = 280 bits (717), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 126/187 (67%), Positives = 161/187 (86%) Query: 1 MFGLLGRNGAGKTTLMRVLATLLHKSGGSVTVCGIPIEQSKEVRKLIGYLPQDFSIYPGM 60 MFGLLGRNGAGKTT MR+LATLL K+ GS+ +CG+PIE +KE+R ++GYLPQDFS+YP M Sbjct: 31 MFGLLGRNGAGKTTFMRILATLLSKTEGSIHMCGVPIENTKEIRNMVGYLPQDFSMYPNM 90 Query: 61 TVYAAMNYLGILSELPKAARKERIFALLKRVNLEDCLNLKVKALSGGMKRRLGIAQAILH 120 TVY AM+YL +LS++P R++ I LL +VNL + N+KVK+LSGGM RRLGIAQA++H Sbjct: 91 TVYKAMDYLAVLSDIPLRKRRKIIAKLLSKVNLTNYQNVKVKSLSGGMNRRLGIAQALIH 150 Query: 121 DPQILIVDEPTAGLDPEERIRFRDLLCEIAENRIVILSTHIVEDIEKTCQNIAVLDKGQI 180 +P++LIVDEPTAGLDPEERIRFR+LLCEIA +RIVILSTHIV DIE TC+N+A+L+ G++ Sbjct: 151 NPRVLIVDEPTAGLDPEERIRFRNLLCEIANDRIVILSTHIVGDIEATCENVAILNSGKV 210 Query: 181 IYQGALQ 187 IY G+ + Sbjct: 211 IYNGSTE 217 >A5KPQ8.1 A5KPQ8_9FIRM Putative uncharacterized protein Length = 291 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 118/190 (62%), Positives = 150/190 (78%) Query: 1 MFGLLGRNGAGKTTLMRVLATLLHKSGGSVTVCGIPIEQSKEVRKLIGYLPQDFSIYPGM 60 M+G+LG NGAGKTTLMR+LATL + G V + GI I++ KE+RK+IGYLPQ+FSIYP M Sbjct: 29 MYGMLGENGAGKTTLMRILATLSEPTTGMVEINGIDIKRKKEIRKIIGYLPQEFSIYPNM 88 Query: 61 TVYAAMNYLGILSELPKAARKERIFALLKRVNLEDCLNLKVKALSGGMKRRLGIAQAILH 120 TVY+A++YLGIL+ELP RK RI LLK+VNLE N + K LSGGMKRR GIAQA+L+ Sbjct: 89 TVYSALDYLGILTELPNNIRKRRINELLKQVNLEHEKNKRFKNLSGGMKRRFGIAQALLN 148 Query: 121 DPQILIVDEPTAGLDPEERIRFRDLLCEIAENRIVILSTHIVEDIEKTCQNIAVLDKGQI 180 DP+ILI+DEPTAGLDPEER+RF +LL E+A RI++LSTHI DIE TC AVL G + Sbjct: 149 DPKILIIDEPTAGLDPEERLRFYNLLSELAVERIILLSTHIASDIEATCSKAAVLSSGTV 208 Query: 181 IYQGALQHFI 190 +++G ++ + Sbjct: 209 VFEGQIEKLL 218 >Q8CU34.1 Q8CU34_STAES ABC transporter (ATP-binding protein) Length = 301 Score = 247 bits (630), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 112/190 (58%), Positives = 151/190 (79%) Query: 1 MFGLLGRNGAGKTTLMRVLATLLHKSGGSVTVCGIPIEQSKEVRKLIGYLPQDFSIYPGM 60 MFG+LGRNG+GK+TLM ++AT+L S G+VT+ GI I+ S+++R++IGYLPQDF YP M Sbjct: 31 MFGILGRNGSGKSTLMNIIATILQPSKGTVTINGIEIKNSQKIRQMIGYLPQDFDFYPNM 90 Query: 61 TVYAAMNYLGILSELPKAARKERIFALLKRVNLEDCLNLKVKALSGGMKRRLGIAQAILH 120 V + YLG LS++ + + + +L++VNL D N KVK+LSGGMK+RLGIAQAILH Sbjct: 91 KVSEVLYYLGFLSKINQKDFDKYVDLILRKVNLIDYKNKKVKSLSGGMKKRLGIAQAILH 150 Query: 121 DPQILIVDEPTAGLDPEERIRFRDLLCEIAENRIVILSTHIVEDIEKTCQNIAVLDKGQI 180 DP+++IVDEPTAGLDPEER+R R+LL ++AEN+IVI+STHIV DIE TC IA+LDKG + Sbjct: 151 DPKVIIVDEPTAGLDPEERVRLRNLLSDLAENKIVIISTHIVSDIESTCNKIAILDKGSL 210 Query: 181 IYQGALQHFI 190 +Y+G + I Sbjct: 211 VYKGDIPSLI 220 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.141 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,214,427,258 Number of extensions: 47542886 Number of successful extensions: 451637 Number of sequences better than 1.0e-05: 90314 Number of HSP's gapped: 348652 Number of HSP's successfully gapped: 95011 Length of query: 209 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 79 Effective length of database: 1,835,964,253 Effective search space: 145041175987 Effective search space used: 145041175987 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)