BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0012.p (152 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9Q9.1 B1D9Q9_9BACL Putative uncharacterized protein 215 9e-55 C0URX7.1 C0URX7_9ACTO Uncharacterized conserved protein 166 8e-40 Q0S6N0.1 Q0S6N0_RHOSR Putative uncharacterized protein 164 2e-39 C4DF54.1 C4DF54_9ACTO Uncharacterized conserved protein 163 4e-39 A4X8D3.1 A4X8D3_SALTO Putative uncharacterized protein 158 1e-37 >B1D9Q9.1 B1D9Q9_9BACL Putative uncharacterized protein Length = 156 Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 103/148 (69%), Positives = 120/148 (81%) Query: 5 KEISPLVEALGLQPHVEGGWYKRLWNAPFEIPQETLGESYSGPRASASSIYFLLHADEAS 64 KEISPLV AL L+PHVEGGWYK +W A FEIPQ LGE YSGPR +ASSIYFLLH E S Sbjct: 7 KEISPLVAALELKPHVEGGWYKEIWKANFEIPQAVLGEPYSGPRFAASSIYFLLHPGEFS 66 Query: 65 EWHTVLSSEIWLWHSGSPIVLSLGGTGDKPENVTEVILGLDVAAGQQPQVVIPPGVWQAA 124 +WHTV S E+WLWHSGSP++L+LGGTG+ PE E+I+G DVA GQ PQ ++P WQ A Sbjct: 67 DWHTVHSDELWLWHSGSPLMLTLGGTGENPEVRKEIIVGGDVANGQHPQALVPATEWQMA 126 Query: 125 RPLGEEPVLVSCIVSPEFHFDDFKLIGK 152 RPLG+EPVLVSCIV+P FH+DDFKLI + Sbjct: 127 RPLGDEPVLVSCIVAPGFHYDDFKLIER 154 >C0URX7.1 C0URX7_9ACTO Uncharacterized conserved protein Length = 144 Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 79/137 (57%), Positives = 97/137 (70%) Query: 13 ALGLQPHVEGGWYKRLWNAPFEIPQETLGESYSGPRASASSIYFLLHADEASEWHTVLSS 72 LGLQPH EGGW+ W + IP L E YSG R++ ++IYFLL A E S WHTV S+ Sbjct: 7 GLGLQPHPEGGWFAETWRSTLTIPNSVLPEVYSGNRSAGTAIYFLLLAGEQSGWHTVRSA 66 Query: 73 EIWLWHSGSPIVLSLGGTGDKPENVTEVILGLDVAAGQQPQVVIPPGVWQAARPLGEEPV 132 EIWL+H GSP+ L LGG GD P + T +++G D++AG QPQVV+PPG WQ ARP +EP Sbjct: 67 EIWLYHRGSPVALDLGGDGDVPGDPTTILVGPDLSAGHQPQVVVPPGRWQRARPAADEPA 126 Query: 133 LVSCIVSPEFHFDDFKL 149 LVSCIV P F F+DF L Sbjct: 127 LVSCIVVPGFDFEDFWL 143 >Q0S6N0.1 Q0S6N0_RHOSR Putative uncharacterized protein Length = 185 Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 77/149 (51%), Positives = 99/149 (66%) Query: 1 MVTQKEISPLVEALGLQPHVEGGWYKRLWNAPFEIPQETLGESYSGPRASASSIYFLLHA 60 M E+ L L PH EGGWY+ W + IP+ +L Y GPRA+ ++I FLL Sbjct: 37 MAAMTELPEWARTLDLAPHPEGGWYRETWRSDVTIPKRSLPGDYPGPRAAGTAILFLLMP 96 Query: 61 DEASEWHTVLSSEIWLWHSGSPIVLSLGGTGDKPENVTEVILGLDVAAGQQPQVVIPPGV 120 + SEWH+V S+EIWL+H GSP+ L LGG G +P N ILG DVAAGQQPQ+++PP Sbjct: 97 GQQSEWHSVRSAEIWLYHRGSPLRLELGGDGSEPANPDAQILGADVAAGQQPQLLVPPRH 156 Query: 121 WQAARPLGEEPVLVSCIVSPEFHFDDFKL 149 WQ A+P G+EP LVSC+V+P F F DF+L Sbjct: 157 WQRAKPEGDEPTLVSCVVTPGFDFADFRL 185 >C4DF54.1 C4DF54_9ACTO Uncharacterized conserved protein Length = 147 Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 81/151 (53%), Positives = 102/151 (67%), Gaps = 5/151 (3%) Query: 1 MVTQKEISPLVEALGLQPHVEGGWYKRLWNAPFEIPQETLGESYSGPRASASSIYFLLHA 60 MV Q S LV+ L L PH EGGW++ W AP + Y G R++A++IYFLLH Sbjct: 1 MVEQTSRSKLVDELDLAPHPEGGWFRETWAAPVGFEPD----GYPGRRSAATAIYFLLHP 56 Query: 61 DEASEWHTVLSSEIWLWHSGSPIVLSLGGTGDKP-ENVTEVILGLDVAAGQQPQVVIPPG 119 E S WHTV S E+WLWH G P+ L LGG GD+P + T V LG+DVAAGQ+PQ ++P Sbjct: 57 GEESRWHTVRSDELWLWHQGGPLELRLGGDGDRPLADFTPVTLGMDVAAGQRPQQLVPGN 116 Query: 120 VWQAARPLGEEPVLVSCIVSPEFHFDDFKLI 150 VWQAA PLG+EP LVSC+V+P F DF++I Sbjct: 117 VWQAAIPLGDEPTLVSCVVAPGFDMADFRMI 147 >A4X8D3.1 A4X8D3_SALTO Putative uncharacterized protein Length = 271 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 80/144 (55%), Positives = 98/144 (68%), Gaps = 7/144 (4%) Query: 8 SPLVEALGLQPHVEGGWYKRLWNA-PFEIPQETLGESYSGPRASASSIYFLLHADEASEW 66 S LV L L PH EGGW++ W A P P Y G R++A++IYFLLH DE S W Sbjct: 132 SELVALLDLAPHPEGGWFRETWRATPTLHP-----TGYDGSRSAATAIYFLLHPDEHSRW 186 Query: 67 HTVLSSEIWLWHSGSPIVLSLGGTGDKP-ENVTEVILGLDVAAGQQPQVVIPPGVWQAAR 125 H V S E+WLWHSG P+ L GG+G +P + EV LG DV+AGQ+PQV+IP G WQAA Sbjct: 187 HVVRSDELWLWHSGGPLTLRFGGSGQRPTDEFREVALGADVSAGQRPQVLIPGGTWQAAV 246 Query: 126 PLGEEPVLVSCIVSPEFHFDDFKL 149 P G++PVLVSC+VSP F F DF+L Sbjct: 247 PAGDQPVLVSCVVSPGFDFADFQL 270 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.136 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,076,109,423 Number of extensions: 46149890 Number of successful extensions: 90514 Number of sequences better than 1.0e-05: 384 Number of HSP's gapped: 89610 Number of HSP's successfully gapped: 384 Length of query: 152 Length of database: 3,060,696,203 Length adjustment: 114 Effective length of query: 38 Effective length of database: 1,986,700,493 Effective search space: 75494618734 Effective search space used: 75494618734 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 125 (52.8 bits)