BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0101.0010.p
         (144 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C2R790.1 C2R790_BACCE Putative uncharacterized protein                134   3e-30
C2YQR8.1 C2YQR8_BACCE Putative uncharacterized protein                133   5e-30
A0RD59.1 A0RD59_BACAH Putative uncharacterized protein                133   5e-30
C1ERK6.1 C1ERK6_BACC3 Putative uncharacterized protein                133   6e-30
C2VST3.1 C2VST3_BACCE Putative uncharacterized protein                133   6e-30

>C2R790.1 C2R790_BACCE Putative uncharacterized protein
          Length = 142

 Score =  134 bits (336), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 94/139 (67%)

Query: 1   MVVWVFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQVLAGSLVALV 60
           M  WV W I AG+LF+ EM+++TFY+LWL IGA+   L++L  PDA+LLQV  G++V+L 
Sbjct: 1   MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPDALLLQVTVGAIVSLT 60

Query: 61  LTIFSKPLVARFRSSRGFQDTGTDIVGRQGLVVAPIEPGRYGQVKVGGDTWSATSIESLG 120
           LT F+K +   FR ++GF DT   +VG++GLV+  I     G VKV GDTW+A +  S+ 
Sbjct: 61  LTFFTKRISKNFREAKGFTDTVDMLVGKRGLVMQAITNEANGIVKVDGDTWTAIADSSID 120

Query: 121 KDEVVKVVGRSSTIIEVVR 139
             E V V+ R STI++V +
Sbjct: 121 AGEKVVVIKRHSTILQVKK 139


>C2YQR8.1 C2YQR8_BACCE Putative uncharacterized protein
          Length = 142

 Score =  133 bits (335), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 97/139 (69%)

Query: 1   MVVWVFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQVLAGSLVALV 60
           M  WV W I AG+LF+ EM+++TFY+LWL IGA+   L++L  P+A+LLQV+AG++V+L 
Sbjct: 1   MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFAPEALLLQVVAGAIVSLT 60

Query: 61  LTIFSKPLVARFRSSRGFQDTGTDIVGRQGLVVAPIEPGRYGQVKVGGDTWSATSIESLG 120
           LT F+K +   FR ++GF DT   +VG++G+V+  I     G VKV GDTW+A + + + 
Sbjct: 61  LTFFTKRISKNFREAKGFTDTVDMLVGKKGIVMQAITKEANGIVKVDGDTWTAIADDPID 120

Query: 121 KDEVVKVVGRSSTIIEVVR 139
             E V V+ R+STI++V +
Sbjct: 121 AGEKVIVIKRNSTILQVKK 139


>A0RD59.1 A0RD59_BACAH Putative uncharacterized protein
          Length = 144

 Score =  133 bits (335), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 97/139 (69%)

Query: 1   MVVWVFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQVLAGSLVALV 60
           M  WV W I AG+LF+ EM+++TFY+LWL IGA+   L++L +P+A+LLQV+AG++V+L 
Sbjct: 3   MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFVPEALLLQVVAGAIVSLT 62

Query: 61  LTIFSKPLVARFRSSRGFQDTGTDIVGRQGLVVAPIEPGRYGQVKVGGDTWSATSIESLG 120
           LT F+K +   FR ++GF DT   +VG++G+V+  I     G VKV GDTW+A +   + 
Sbjct: 63  LTFFTKRISKNFREAKGFTDTVDMLVGKKGIVMQAITNETNGIVKVDGDTWTAVADAPID 122

Query: 121 KDEVVKVVGRSSTIIEVVR 139
             E V V+ R+STI++V +
Sbjct: 123 TGEKVVVIKRNSTILQVKK 141


>C1ERK6.1 C1ERK6_BACC3 Putative uncharacterized protein
          Length = 142

 Score =  133 bits (334), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 97/139 (69%)

Query: 1   MVVWVFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQVLAGSLVALV 60
           M  WV W I AG+LF+ EM+++TFY+LWL IGA+   L++L +P+A+LLQV+AG++V+L 
Sbjct: 1   MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFVPEALLLQVVAGAIVSLT 60

Query: 61  LTIFSKPLVARFRSSRGFQDTGTDIVGRQGLVVAPIEPGRYGQVKVGGDTWSATSIESLG 120
           LT F+K +   FR ++GF DT   +VG++G+V+  I     G VKV GDTW+A +   + 
Sbjct: 61  LTFFTKRISKNFREAKGFTDTVDMLVGKKGIVMQAITNETNGIVKVDGDTWTAVADAPID 120

Query: 121 KDEVVKVVGRSSTIIEVVR 139
             E V V+ R+STI++V +
Sbjct: 121 TGEKVVVIKRNSTILQVKK 139


>C2VST3.1 C2VST3_BACCE Putative uncharacterized protein
          Length = 142

 Score =  133 bits (334), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 97/139 (69%)

Query: 1   MVVWVFWLIAAGVLFVVEMMTLTFYLLWLSIGALAACLVSLLLPDAILLQVLAGSLVALV 60
           M  WV W I AG+LF+ EM+++TFY+LWL IGA+   L++L +P+A+LLQV+AG++V+L 
Sbjct: 1   MAAWVIWFIIAGILFIAEMLSITFYMLWLGIGAVVGGLIALFVPEALLLQVVAGAIVSLT 60

Query: 61  LTIFSKPLVARFRSSRGFQDTGTDIVGRQGLVVAPIEPGRYGQVKVGGDTWSATSIESLG 120
           LT F+K +   FR ++GF DT   +VG++G+V+  I     G VKV GDTW+A +   + 
Sbjct: 61  LTFFTKRISKNFREAKGFTDTVDMLVGKKGIVMQAITNETNGIVKVDGDTWTAVADAPID 120

Query: 121 KDEVVKVVGRSSTIIEVVR 139
             E V V+ R+STI++V +
Sbjct: 121 TGEKVVVIKRNSTILQVKK 139


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.326    0.141    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 837,911,049
Number of extensions: 31304757
Number of successful extensions: 129327
Number of sequences better than 1.0e-05: 243
Number of HSP's gapped: 129461
Number of HSP's successfully gapped: 243
Length of query: 144
Length of database: 3,060,696,203
Length adjustment: 107
Effective length of query: 37
Effective length of database: 2,052,647,598
Effective search space: 75947961126
Effective search space used: 75947961126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 125 (52.8 bits)