BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0009.p (529 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K472.1 B3K472_9BACI FAD dependent oxidoreductase 533 e-149 C0V1V4.1 C0V1V4_9BACT Glucose inhibited division protein A 529 e-148 C0ZGP3.1 C0ZGP3_BREBN Putative uncharacterized protein 520 e-145 B3KFT9.1 B3KFT9_9BACI FAD dependent oxidoreductase 518 e-145 C1WGW2.1 C1WGW2_9ACTO FAD dependent oxidoreductase 510 e-142 >B3K472.1 B3K472_9BACI FAD dependent oxidoreductase Length = 524 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 268/520 (51%), Positives = 351/520 (67%), Gaps = 3/520 (0%) Query: 3 FERRRQSDVIIIXXXXXXXXXXXXXXXXXMRVIMTEETDWLGGQLTSQAVPPDEHRWIES 62 E ++D+II+ RV+MTEE+DWLGGQ+TSQ VPPDEH WIE Sbjct: 1 MENHIEADIIILGGGLGGCAAALAAAKAGKRVVMTEESDWLGGQITSQGVPPDEHPWIEQ 60 Query: 63 SGCTASYREFRSRVRDYYRRNYPLTESARNNPLLNPGNGWVSRLAHEPKVALSVLHEMLA 122 GCTASYREFR+R+RDYY+ +PL +R LNPG+ VS +AHEP+ AL+VL MLA Sbjct: 61 FGCTASYREFRNRIRDYYKELFPLRAESRQERYLNPGSALVSGIAHEPRAALAVLQGMLA 120 Query: 123 PYINTGRIKVLYHTVPVHAETAGDEVTEVTVLHKESGAEIKLHGAYYLDATECGDLLPLA 182 PY+++GR+ +L + AE+ GD+VT V + SG +KL GA++LDATE GDLLPLA Sbjct: 121 PYVHSGRLTILTEHALMEAESGGDQVTSVRLRDSRSGDIVKLTGAFFLDATEEGDLLPLA 180 Query: 183 GAEHVCGAESQKETGEPHALEQ-ADPLDMQSITHVAAVDYVPDGDFTIDRPEDYDYWRQY 241 G E+V G+ES +ETGEPHAL AD DMQ+ T A+DY D TI +P+ YD+W+ Y Sbjct: 181 GIEYVTGSESAEETGEPHALSGPADRADMQAFTWCFAMDYREGKDHTIPKPDRYDFWKSY 240 Query: 242 VPSFSRYPILSWYASDASDTTKLKQFTMFPNEEGIMSLWDYRRIVDPSIWSQPLNDGEVT 301 F +LSW T + +++FP+ SLW YR+I++P + L D VT Sbjct: 241 RADFWPDAMLSWTGL-VPHTLEPVTYSLFPDGRS-FSLWKYRQILNPEHFEGGLFDSSVT 298 Query: 302 LLNWALNDYYAGPLIGVSPAERESHLKGARQLTLSLVYWLQTEAPRLDGGKGYPGVRLRG 361 ++NW NDY+ G +I V P ERE HL+ +RQL+LSL+YW+QTEAPR DGGKGYPG+RLR Sbjct: 299 VVNWPQNDYWLGSIIDVGPEERERHLEESRQLSLSLLYWMQTEAPRPDGGKGYPGLRLRP 358 Query: 362 DVLGTEDGLAKSPYIREARRIRGLYTVTEQDVSKELRGALGPMRYEDSVGVGSYHLDLHP 421 DV+GT+DGLAK+PYIRE+RRIR +TV EQ ++ E R + DSVG+G Y +DLHP Sbjct: 359 DVMGTKDGLAKAPYIRESRRIRAEFTVKEQHIAAECRPDGRAETFHDSVGIGCYRIDLHP 418 Query: 422 TTVSQRTFYIPNHPYEIPLGSLIPVRITNLLPACKNISMTQIANGCYRLHPTEWNIGEAA 481 +T + I + P++IP+GSLIPVR+ N+L ACKNI T I NGCYRLHP EWNIGEAA Sbjct: 419 STGLRTYIDISSLPFQIPMGSLIPVRVANVLAACKNIGTTHITNGCYRLHPVEWNIGEAA 478 Query: 482 GLLASYACTRRVLPRGVYESEAHLKAYQQLLTEHGVQLHW 521 G LA+Y + PR V + HL+A+Q+ LTE G++ W Sbjct: 479 GFLAAYCIEHGLKPREVRNTPDHLEAFQRRLTEQGIERSW 518 >C0V1V4.1 C0V1V4_9BACT Glucose inhibited division protein A Length = 527 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 269/494 (54%), Positives = 347/494 (70%), Gaps = 6/494 (1%) Query: 33 RVIMTEETDWLGGQLTSQAVPPDEHRWIESSGCTASYREFRSRVRDYYRRNYPLTESARN 92 +V+++EETDWLGGQLTSQ VPPDEH WIES+GCTASYR R+++RDYYRRNYPL S+R Sbjct: 30 KVLLSEETDWLGGQLTSQGVPPDEHPWIESTGCTASYRLLRTKIRDYYRRNYPLLASSRQ 89 Query: 93 NPLLNPGNGWVSRLAHEPKVALSVLHEMLAPYINTGRIKVLYHTVPVHAETAGDEVTEVT 152 +P LNPG G VS L HEP+VAL+ + E+LAPY TGR++VL PV AE+ GD V VT Sbjct: 90 DPYLNPGKGNVSALCHEPRVALAAIEELLAPYRATGRLEVLLEHRPVAAESDGDIVRSVT 149 Query: 153 VLHKESGAEIKLHGAYYLDATECGDLLPLAGAEHVCGAESQKETGEPHALE-QADPLDMQ 211 + S ++++H +Y LDATE GD+L LAG EHV GAESQ +TGEPHALE +PLD Q Sbjct: 150 LEALGSQEKVQVHASYILDATELGDILELAGIEHVIGAESQAQTGEPHALEGDPNPLDQQ 209 Query: 212 SITHVAAVDYVPDGDFTIDRPEDYDYWRQYVPSFSRYPILSWYASDASDTTKLKQFTMFP 271 +IT A+D++ D TID+P +YD+WR+Y SF L W +T +++ +F Sbjct: 210 AITWCFALDFIEGEDHTIDKPSEYDFWRRYQASFWPGRQLGW-TDVHPETLEVRTHKLF- 267 Query: 272 NEEGIMSLWDYRRIVDPSIWSQPLNDGEVTLLNWALNDYYAGPLIGVSPAERESHLKGAR 331 + +G LW YRRI + + ++TL+NW NDY+ GP++GVSP E++ HL AR Sbjct: 268 DPQGNFDLWRYRRIFFRGHYPEGTYPSDITLVNWPQNDYWLGPIVGVSPQEKDIHLHRAR 327 Query: 332 QLTLSLVYWLQTEAPRLDGGKGYPGVRLRGDVLGTEDGLAKSPYIREARRIRGLYTVTEQ 391 QL+LSL+YW+QTEAPR DGG GYP +RLRGDVLGT DGLAK Y+RE+RR+R +TV E Sbjct: 328 QLSLSLLYWMQTEAPRHDGGYGYPELRLRGDVLGT-DGLAKHMYVRESRRLRAEFTVLEH 386 Query: 392 DVSKELRGAL-GPMRYEDSVGVGSYHLDLHPTTVSQRTFYIPNHPYEIPLGSLIPVRITN 450 V E RG L G + DSVGVGSY +DLHP+T + I ++P++IPLG+LIP+R+ N Sbjct: 387 HVGVEARGKLQGAEEFPDSVGVGSYRIDLHPSTGGRTYIDISSYPFQIPLGALIPIRVEN 446 Query: 451 LLPACKNISMTQIANGCYRLHPTEWNIGEAAGLLASYACTRRVLPRGVYESEAHLKAYQQ 510 +LPACKN+ +T I NGCYRLHP EWNIGEAAG LA+Y + PR V + HL +Q Sbjct: 447 VLPACKNLGVTHITNGCYRLHPVEWNIGEAAGALAAYCLEHDLTPRAVRNMQQHLTDFQH 506 Query: 511 LLTEH-GVQLHWSE 523 LL G QL W + Sbjct: 507 LLQNKLGFQLAWPQ 520 >C0ZGP3.1 C0ZGP3_BREBN Putative uncharacterized protein Length = 524 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 262/518 (50%), Positives = 337/518 (65%), Gaps = 2/518 (0%) Query: 5 RRRQSDVIIIXXXXXXXXXXXXXXXXXMRVIMTEETDWLGGQLTSQAVPPDEHRWIESSG 64 R +DV+II VIMTEETDW+GGQ TSQAVPPDEH WIE G Sbjct: 2 RELHADVVIIGGGTGGCAAALAAAKSGKSVIMTEETDWIGGQFTSQAVPPDEHPWIEQFG 61 Query: 65 CTASYREFRSRVRDYYRRNYPLTESARNNPLLNPGNGWVSRLAHEPKVALSVLHEMLAPY 124 CT SYR FR VRDYYR +YP+T AR P L+PGNG VSRL HEPKVAL+V ++MLAPY Sbjct: 62 CTRSYRTFRDSVRDYYRNHYPMTAEARVIPNLDPGNGSVSRLCHEPKVALAVFYQMLAPY 121 Query: 125 INTGRIKVLYHTVPVHAETAGDEVTEVTVLHKESGAEIKLHGAYYLDATECGDLLPLAGA 184 IN+GR+ +L + AGD V +TV ++ +L Y+LDATECGD+LP AG Sbjct: 122 INSGRLTILTNHKLHAVRMAGDNVLSITVEDQKHHDFHELVAPYFLDATECGDVLPQAGV 181 Query: 185 EHVCGAESQKETGEPHAL-EQADPLDMQSITHVAAVDYVPDGDFTIDRPEDYDYWRQYVP 243 E+V GAES +TGEP+A+ P D+Q+ T+ A+DY+ D TI +PE YD+WR Y Sbjct: 182 EYVLGAESVDQTGEPNAVVGPPQPNDIQAFTYCFAMDYLEGEDHTIAKPETYDFWRNYKA 241 Query: 244 SFSRYPILSWYASDASDTTKLKQFTMFPNEEGIMSLWDYRRIVDPSIWSQPLNDGEVTLL 303 F +LSW S+ +T + ++ +FP + L+ YR+I DP + L VT + Sbjct: 242 DFWPDKLLSWTGSNPRNTAESVRYELFPGTK-YFPLFTYRQIADPKNFQTGLYKSGVTTV 300 Query: 304 NWALNDYYAGPLIGVSPAERESHLKGARQLTLSLVYWLQTEAPRLDGGKGYPGVRLRGDV 363 NW NDY+ G +I V ER+ HL G +QL+LSL+YW+QTEAPR DGG+GYPG+RLR DV Sbjct: 301 NWPQNDYWLGSIIDVPEEERQRHLYGGKQLSLSLLYWMQTEAPRPDGGQGYPGLRLRKDV 360 Query: 364 LGTEDGLAKSPYIREARRIRGLYTVTEQDVSKELRGALGPMRYEDSVGVGSYHLDLHPTT 423 +GTEDGLA PYIRE+RRI+ +TV EQ VS +R +EDSVGVGSY +DLHP+T Sbjct: 361 MGTEDGLAMYPYIRESRRIKAEFTVLEQHVSAFVRKTGKAEAFEDSVGVGSYRIDLHPST 420 Query: 424 VSQRTFYIPNHPYEIPLGSLIPVRITNLLPACKNISMTQIANGCYRLHPTEWNIGEAAGL 483 ++ + +P++IPLGSLIPVR+ NLLPA KN+ +T I NGC+RLHP EWN+GE AG Sbjct: 421 ANRNYVDVSTYPFQIPLGSLIPVRVNNLLPAGKNLGVTHITNGCFRLHPVEWNVGEVAGY 480 Query: 484 LASYACTRRVLPRGVYESEAHLKAYQQLLTEHGVQLHW 521 L +Y + PR V + LK +Q L GV+ W Sbjct: 481 LTAYCLQHGLTPRAVRNTPDELKKFQAFLYAEGVEYFW 518 >B3KFT9.1 B3KFT9_9BACI FAD dependent oxidoreductase Length = 524 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 266/519 (51%), Positives = 345/519 (66%), Gaps = 5/519 (0%) Query: 5 RRRQSDVIIIXXXXXXXXXXXXXXXXXMRVIMTEETDWLGGQLTSQAVPPDEHRWIESSG 64 R Q+D++I+ VIMTEET W+GGQLTSQAVPPDEH WIES G Sbjct: 3 REMQADIVILGGGTGGTAAALAAAKSGKTVIMTEETTWIGGQLTSQAVPPDEHPWIESFG 62 Query: 65 CTASYREFRSRVRDYYRRNYPLTESARNNPLLNPGNGWVSRLAHEPKVALSVLHEMLAPY 124 CT SYR+FR VR YYR +P+T AR+N LNPG+G VSRL HEP+ AL+VLH+MLAPY Sbjct: 63 CTRSYRQFREGVRQYYRDYFPMTPKARSNVQLNPGSGIVSRLCHEPRTALAVLHQMLAPY 122 Query: 125 INTGRIKVLYHTVPVHAETAGDEVTEVTVLHKESGAEIKLHGAYYLDATECGDLLPLAGA 184 I++GR+ +LY A+ +GD V VTV H E+ +I L +++DATE GDLLPLAG Sbjct: 123 IHSGRLTILYQYAAESADVSGDRVDSVTVRHLETEDQIVLRAPFFVDATELGDLLPLAGI 182 Query: 185 EHVCGAESQKETGEPHALEQADPL--DMQSITHVAAVDYVPDGDFTIDRPEDYDYWRQYV 242 E+V GAES+ +TGEPHA++ DPL DMQ T+ AVDY+ D TI++P YD+WR+Y Sbjct: 183 EYVTGAESKAQTGEPHAVD-GDPLPQDMQGFTYCFAVDYLEGEDHTIEKPALYDFWREYK 241 Query: 243 PSFSRYPILSWYASDASDTTKLKQFTMFPNEEGIMSLWDYRRIVDPSIWSQPLNDGEVTL 302 P F +LS A S T + ++ +FP G L+ YR+I+DP +++ D V+L Sbjct: 242 PDFWPDKLLSLTAVKPS-TNEPIEYEIFPGH-GKFPLYQYRQILDPKHFAEGTFDSSVSL 299 Query: 303 LNWALNDYYAGPLIGVSPAERESHLKGARQLTLSLVYWLQTEAPRLDGGKGYPGVRLRGD 362 +NW NDY+ G +I V E + H+ A+QL+LSL+YWLQTE PR DGG+GYPG+RLR D Sbjct: 300 VNWPQNDYWLGSIIDVPKEEADHHIDQAKQLSLSLLYWLQTEVPRPDGGQGYPGLRLRPD 359 Query: 363 VLGTEDGLAKSPYIREARRIRGLYTVTEQDVSKELRGALGPMRYEDSVGVGSYHLDLHPT 422 V+GTEDG+A PYIRE+RRI+ +TV EQ V+ E R + DSVG+G Y +DLHP+ Sbjct: 360 VVGTEDGMAMYPYIRESRRIQAEFTVLEQHVATESRPDGVAETFHDSVGIGCYRIDLHPS 419 Query: 423 TVSQRTFYIPNHPYEIPLGSLIPVRITNLLPACKNISMTQIANGCYRLHPTEWNIGEAAG 482 T + I + P++IPLGSLIP RI N+L A KNI +T I NGCYRLHP EWNIGEAAG Sbjct: 420 TGERPYIDISSLPFQIPLGSLIPKRIKNVLAASKNIGVTHITNGCYRLHPVEWNIGEAAG 479 Query: 483 LLASYACTRRVLPRGVYESEAHLKAYQQLLTEHGVQLHW 521 S+ +LP V E L ++QQ L G++L W Sbjct: 480 YCISHCLDHDILPTDVRNDEDRLASFQQKLVSEGIELAW 518 >C1WGW2.1 C1WGW2_9ACTO FAD dependent oxidoreductase Length = 531 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 259/501 (51%), Positives = 336/501 (67%), Gaps = 16/501 (3%) Query: 34 VIMTEETDWLGGQLTSQAVPPDEHRWIESSGCTASYREFRSRVRDYYRRNYPLTESARNN 93 V+MTEE DW+GGQLTSQAVPPDEH W+E G TASYR R +RDYYRR+YPLTE++R Sbjct: 28 VVMTEEYDWIGGQLTSQAVPPDEHTWVEQFGVTASYRALRDGIRDYYRRHYPLTEASRAA 87 Query: 94 PLLNPGNGWVSRLAHEPKVALSVLHEMLAPYINTGRIKVLYHTVPVHAETAGDEVTEVTV 153 LNPG G+VS+L HEP+VA++VL MLAPY + R++VL PV AET GD VT VTV Sbjct: 88 AELNPGAGYVSKLCHEPRVAVAVLEAMLAPYRASRRLQVLQPYKPVGAETDGDRVTAVTV 147 Query: 154 LHKESGAEIKLHGAYYLDATECGDLLPLAGAEHVCGAESQKETGEPHALEQADPLDMQSI 213 H+++G ++ L Y LDATE G+LLPL G E+V G ESQ TGEP A +A PL+MQ++ Sbjct: 148 QHRDTGTQLTLTAPYILDATETGELLPLTGTEYVTGFESQAVTGEPSAPAEAQPLNMQAV 207 Query: 214 THVAAVDYVPDGDFTIDRPEDYDYWRQYVPSFSRYPILSWYASDASDTTKLKQ-FTMFPN 272 + A+D+V +GD D+P DY +WR Y PSF +LSW A D ++ FT P+ Sbjct: 208 SFCFAIDHV-EGDQVGDKPADYAFWRNYQPSFWGDRLLSWNAPDPRTLAPSRRTFTPNPD 266 Query: 273 EE------------GIMSLWDYRRIVDPSIWSQPLNDGEVTLLNWALNDYYAGPLIGVSP 320 ++ G +LW +RRI + ++ L+NW + DY GP+ V Sbjct: 267 DDPLAVVADQRRTGGDTNLWTFRRIAARRHFQAGAYPSDICLVNWPMIDYLDGPVFDVPD 326 Query: 321 AERESHLKGARQLTLSLVYWLQTEAPRLDGGKGYPGVRLRGDVLGTEDGLAKSPYIREAR 380 A+R HL+GA++L+ ++ YWLQTEAPR DGG G+PG+RLRGD+LG+ DGLA++PYIRE+R Sbjct: 327 ADR--HLRGAKELSQAVFYWLQTEAPRPDGGTGFPGLRLRGDLLGSADGLAQAPYIRESR 384 Query: 381 RIRGLYTVTEQDVSKELRGALGPMRYEDSVGVGSYHLDLHPTTVSQRTFYIPNHPYEIPL 440 RI YTV EQD+S +RG G + Y DSVGVG Y +DLHP+T + + P+ IPL Sbjct: 385 RIAAEYTVVEQDLSVAVRGDAGAVEYADSVGVGMYRIDLHPSTGGDNYIDVASSPFRIPL 444 Query: 441 GSLIPVRITNLLPACKNISMTQIANGCYRLHPTEWNIGEAAGLLASYACTRRVLPRGVYE 500 G+LIP R+ NLLPA KN+ T I NGCYRLHP EWN+GEAAGLLA++ R V PR V Sbjct: 445 GALIPRRVENLLPAGKNLGTTHITNGCYRLHPVEWNVGEAAGLLAAFCLDRGVSPRAVRN 504 Query: 501 SEAHLKAYQQLLTEHGVQLHW 521 + A L +Q L GV+L W Sbjct: 505 TPALLSDFQARLVAQGVELSW 525 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,316,084,892 Number of extensions: 146300603 Number of successful extensions: 288012 Number of sequences better than 1.0e-05: 203 Number of HSP's gapped: 287798 Number of HSP's successfully gapped: 224 Length of query: 529 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 388 Effective length of database: 1,732,333,088 Effective search space: 672145238144 Effective search space used: 672145238144 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)