BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0005.p (511 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A9KIQ2.1 A9KIQ2_CLOPH Putative uncharacterized protein 409 e-112 C4FYX0.1 C4FYX0_ABIDE Putative uncharacterized protein 387 e-105 Q8R7J6.1 Q8R7J6_THETN Putative uncharacterized protein 379 e-103 C4G4I5.1 C4G4I5_ABIDE Putative uncharacterized protein 374 e-101 B7R6A6.1 B7R6A6_9THEO Putative uncharacterized protein 373 e-101 >A9KIQ2.1 A9KIQ2_CLOPH Putative uncharacterized protein Length = 501 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 212/506 (41%), Positives = 301/506 (59%), Gaps = 6/506 (1%) Query: 1 MSKSYTIAFVPLDERPCNYGFPPLLARGTEFEVLRPPMQLMGLKKRPGDVDGLWTWFEEA 60 M + + +PLDERPCN+ FP + +F + R ++ +G KK P DV + +E Sbjct: 1 MKDTKKVVLLPLDERPCNFKFPYQIFDSEDFIIDR--IEPLGDKKIPADVSEVSRMLKEK 58 Query: 61 CCQADGAVVALDTLLYGGIIPSRLHSXXXXXXXXXXXXXXXXXXXHPKLVIYAFQLIMRC 120 C AD AV+A+DTLLYGG+IPSRLH + L IYAFQ IMRC Sbjct: 59 CKDADIAVLAMDTLLYGGLIPSRLHHFTKEEVMERLNLLREIKSQNNNLKIYAFQCIMRC 118 Query: 121 PQYSLSDEEPDYYADWGREIFRKGFISHRKELGAASDEELQELAEIEDRLPREILDDYLG 180 P+YS +DEEPDYY G +I + G H+++LG +SD +EL ++ +E L+DY Sbjct: 119 PKYSSNDEEPDYYEYCGEQIHQLGNAIHKEKLGISSDYNREELL---SKIKKEDLEDYEN 175 Query: 181 RRSINIEANKLVLELVKEGIIGFMIFPQDDSAPFGHTAKDQQKVRSRITELDLELRAYMY 240 RR N N VL+L KEG++ F+I PQDDSAP+G+TA DQ VR I E L + +Y Sbjct: 176 RREFNRSFNLEVLKLAKEGVLEFLIIPQDDSAPYGYTAMDQISVRKEILENCLSDKVIVY 235 Query: 241 PGADEVGCTLLARMINKATGTVPLIYPRLSSVQGAFVTPLFEDRFFYETLKYQITAAGGL 300 PGADEV TLL+R +N+ P +Y + +SV ++ P +EDR ET++Y I AAG + Sbjct: 236 PGADEVEMTLLSRAMNEVMVKRPKVYVKYASVHAPYLIPSYEDRSLGETVRYHIMAAGCI 295 Query: 301 IASSAGEADLVLLVNTPGETMIEAASQQGSFFSYDVYRNLMEIVEYGNYILNHKGKPVAV 360 S EAD VL ++ P M+EA +Q S YDV RNL E V Y +GKPV + Sbjct: 296 QVDSVSEADFVLALSAPARKMLEAVTQPASNADYDVERNLTEFV-YAIETYISEGKPVTI 354 Query: 361 ADVGYANGGDQKLVKMLREKNILFKLAGYAGWNTSSNTLGTVISQAMIYLHYGRTQEHLD 420 D YANG D +LV +L +K +L K+AGYAGWNTSSNT+GT +++ + YL+YG ++H++ Sbjct: 355 GDNAYANGSDLELVAILNQKELLLKVAGYAGWNTSSNTIGTALAEGVKYLYYGSNKKHME 414 Query: 421 FLGLRYAEDVCYCSVVRGELSDGPIQDMGFGKYLLDGQRGSVASMVEQRLRQELAVRIDG 480 FL LRY ED YC +R E+++ + +G + + Q G V+ +V++ L+ ++ Sbjct: 415 FLLLRYLEDAGYCGFIRKEITEKELPALGMNYFDIKEQNGVVSELVKKYLQDFADTKLTS 474 Query: 481 PEGRVEITDCYMPWNRMFEVGLSVRF 506 + I D MPW RMFE ++V + Sbjct: 475 ITKHILIEDIKMPWRRMFETDITVSY 500 >C4FYX0.1 C4FYX0_ABIDE Putative uncharacterized protein Length = 499 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 195/500 (39%), Positives = 295/500 (59%), Gaps = 7/500 (1%) Query: 7 IAFVPLDERPCNYGFPPLLARGTEFEVLRPPMQLMGLKKRPGDVDGLWTWFEEACCQADG 66 I +PLDERPCNY FP L + E++ P + +G KK P D++ + + + C A G Sbjct: 5 IVLLPLDERPCNYLFPQKLFSHDDIEIILP--KKLGDKKIPADLNEIDNFLTKECKDATG 62 Query: 67 AVVALDTLLYGGIIPSRLHSXXXXXXXXXXXXXXXXXXXHPKLVIYAFQLIMRCPQYSLS 126 +++LDTLLYGG++PSR+H+ + L+IYAF +IMRCP YS S Sbjct: 63 LIISLDTLLYGGLVPSRIHNEKEDKLKERLQILRDIRRENTGLIIYAFNIIMRCPNYSSS 122 Query: 127 DEEPDYYADWGREIFRKGFISHRKELGAASDEELQELAEIEDRLPREILDDYLGRRSINI 186 DEEPDYY ++GREI G H+ LG + + L EI +++P L+DY+ RR +N Sbjct: 123 DEEPDYYENYGREIHEIGVAMHKSHLGI---DNILSLDEIIEKVPERYLNDYISRRKVNR 179 Query: 187 EANKLVLELVKEGIIGFMIFPQDDSAPFGHTAKDQQKVRSRITELDLELRAYMYPGADEV 246 E N L+LVKE I+ ++ PQDDS +G+ A DQ+ +R I E L+ + MYPGADEV Sbjct: 180 ELNLASLDLVKENIVDALVVPQDDSCKYGYAAIDQRDIRKAIIENCLDDKVLMYPGADEV 239 Query: 247 GCTLLARMINKATGTVPLIYPRLSSVQGAFVTPLFEDRFFYETLKYQITAAGGLIASSAG 306 TL++RMIN G P +Y + ++ + PL+E TLKY + +AG + S Sbjct: 240 ELTLMSRMINTLKGKKPKVYLKYATEAAKNIIPLYEGNMLAGTLKYHVLSAGCQLTESYE 299 Query: 307 EADLVLLVNTPGETMIEAASQQGSFFSYDVYRNLMEIVEYGNYILNHKGKPVAVADVGYA 366 AD+++ V P M EA +Q + Y RN+ E+ ++ Y L +GK V +AD YA Sbjct: 300 MADIIMAVTAPAGNMEEAINQPSKYPEYYAERNIAEMFDFIKYRL-AEGKIVTIADNAYA 358 Query: 367 NGGDQKLVKMLREKNILFKLAGYAGWNTSSNTLGTVISQAMIYLHYGRTQEHLDFLGLRY 426 NGGD +++++L +L K+ GYAGWNTS+NT+GT I++A+ H+ T H +FLGLRY Sbjct: 359 NGGDLQIIRLLNANKLLMKVDGYAGWNTSANTVGTAIAEAVDSYHFKLTPTHQNFLGLRY 418 Query: 427 AEDVCYCSVVRGELSDGPIQDMGFGKYLLDGQRGSVASMVEQRLRQELAVRIDGPEGRVE 486 ED YCSVVR + ++ +Q + + + G ++ +V++RL + + + ++ Sbjct: 419 IEDAGYCSVVRQQATN-ELQKYEMNYFDVKEKDGIISEIVKERLEEFIKNELSSISANLQ 477 Query: 487 ITDCYMPWNRMFEVGLSVRF 506 I+ MPW RMFEV ++V++ Sbjct: 478 ISKLIMPWRRMFEVDITVKY 497 >Q8R7J6.1 Q8R7J6_THETN Putative uncharacterized protein Length = 512 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/519 (38%), Positives = 299/519 (57%), Gaps = 25/519 (4%) Query: 3 KSYTIAFVPLDERPCNYGFPPLLARGTEFEVLRPPMQLMGLKKRPGDVDGLWTWFEEACC 62 + + I ++PLDERPCNY FP ++ ++ +++RPP +++G KK+P DVD LW W + Sbjct: 2 EKWRIMYIPLDERPCNYEFPKMIIDISDIDMIRPPKEILGCKKKPADVDKLWEWMRQNIE 61 Query: 63 QADGAVVALDTLLYGGIIPSRLHSXXXXXXXXXXXXXXXXXXXHPKLVIYAFQLIMRCPQ 122 VV++D L+YGGI+PSR+H + L I+AF LI+R P Sbjct: 62 GITHLVVSIDMLVYGGIVPSRIHQKQVEECLSKLLRLRELKKANNNLKIFAFNLIVRTPS 121 Query: 123 YSLSDEEPDYYADWGREIFRKGFISHRKELGAASDEELQELAEIEDRLPREILDDYLGRR 182 Y+ S+EEPDYY ++G IFR G + + +L A++EE++E ++ +P EIL+DYL RR Sbjct: 122 YNSSEEEPDYYKEFGERIFRFGAFTDKIDLNIATEEEIKEFNALKREIPEEILEDYLRRR 181 Query: 183 SINIEANKLVLELVKEGIIGFMIFPQDDSAPFGHTAKDQQKVRSRITELDLELRAYMYPG 242 +N + N V++LVKE +I F+I P DDS+ +G + +++K+ I ELDL R Y YPG Sbjct: 182 EVNHKINLSVVDLVKENVIDFLIIPMDDSSKYGFSPMERRKIMKYIDELDLTDRIYSYPG 241 Query: 243 ADEVGCTLLARMINKATGTVPLIYPRLSSVQGAFVTPLFEDRFFYETLKYQITAAGGLIA 302 ADEVGCTL AR N G P ++ R SS G V PL EDR ET+KYQI A GG++ Sbjct: 242 ADEVGCTLTARAFNDIKGVKPAVFTRYSSENGKNVIPLLEDRRLGETVKYQIIAGGGIVT 301 Query: 303 SSAGEADLVLLVNTPGETMIEAASQQGSFFSY----DVYRNLMEIVE-YGNYILNHKGKP 357 + +AD +L++N P E + S+ + D RNL E VE +YI KGK Sbjct: 302 EDSEKADFILMINPPSEITQQIGDSWNSYLTRRDVGDPERNLNEFVEAIKDYI--EKGKN 359 Query: 358 VAVADVGYANGGDQKLVKMLREKNILFKLAGYAGWNTSSNTLGTVISQAMIYLHY----- 412 +VADV + NG D L+K++++ + K+ Y GWNTS+NTLGTVI+ +M+ Y Sbjct: 360 CSVADVAFLNGADNSLMKLIKKYGLFKKVLSYGGWNTSANTLGTVIAHSMVSSFYINRDN 419 Query: 413 ---GRTQEHLDFLGLRYAEDVCYCSVVRGELSDGPIQDMGFGKYLLDGQRGSVASMVE-- 467 R + FL LRY ED Y VR +++ I G + L + ++ +++ Sbjct: 420 FTEDRKERSYRFLFLRYLEDWGYQYEVRTKVA-KEIDKYGVSYFDLGEKEKIISEVIKGE 478 Query: 468 -QRLRQELAVRIDGPEGRVEITDCYMPWNRMFEVGLSVR 505 ++ ++E D D YMPWNR+FEVG+ V+ Sbjct: 479 LEKFKKENLNEFDYE------FDVYMPWNRLFEVGIEVK 511 >C4G4I5.1 C4G4I5_ABIDE Putative uncharacterized protein Length = 516 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/502 (39%), Positives = 290/502 (57%), Gaps = 9/502 (1%) Query: 7 IAFVPLDERPCNYGFPPLLARGTEFEVLRPPMQLMGLKKRPGDVDGLWTWFEEACCQADG 66 I + LDERPCNY FP L G EFE++ P + +G KK P ++ + + E C A G Sbjct: 22 IVLLSLDERPCNYIFPQKLFSGEEFEIVTP--KKLGYKKSPANLQEIDRFLMEECKDATG 79 Query: 67 AVVALDTLLYGGIIPSRLHSXXXXXXXXXXXXXXXXXXXHPKLVIYAFQLIMRCPQYSLS 126 V++LD LLYGG++PSR+H+ +P+L+IYAF +IMRCP YS Sbjct: 80 LVISLDMLLYGGLVPSRIHNEKEEKLKERLNIIKNIRNENPELLIYAFNIIMRCPTYSTD 139 Query: 127 DEEPDYYADWGREIFRKGFISHRKELGAASDEELQELAEIEDRLPREILDDYLGRRSINI 186 EEPDYY ++GREI G H+ LG E + L +I +++P E LDDY+ RR +N Sbjct: 140 IEEPDYYGEYGREIHEIGEAMHKGHLGI---ENVFPLDKIIEKVPEEYLDDYISRRKVNK 196 Query: 187 EANKLVLELVKEGIIGFMIFPQDDSAPFGHTAKDQQKVRSRITELDLELRAYMYPGADEV 246 N L L+KE II ++ PQDD +G+ A DQ+ + I + LE + MYPGADEV Sbjct: 197 ALNLAALSLIKENIIDALVVPQDDCCKYGYAAIDQRDIVKEIIKNGLENKVLMYPGADEV 256 Query: 247 GCTLLARMINKATGTVPLIYPRLSSVQGAFVTPLFEDRFFYETLKYQITAAGGLIASSAG 306 TL++RMIN G P IY + ++ + PL+E TL+Y I +AG + S Sbjct: 257 ALTLISRMINVLKGKKPKIYIKYATDAARSIIPLYEGNMLSGTLRYHILSAGCQLTESYE 316 Query: 307 EADLVLLVNTPGETMIEAASQQGSFFSYDVYRNLMEIVEYGNYILNHKGKPVAVADVGYA 366 AD+++ V P M EA +Q + Y RN+ E+ ++ L +GK + +AD YA Sbjct: 317 AADIIMAVTAPAGNMEEAVNQPSKYPEYYAERNIAEMFDFITDRL-AEGKIITIADNAYA 375 Query: 367 NGGDQKLVKMLREKNILFKLAGYAGWNTSSNTLGTVISQAMIYLHYGRTQEHLDFLGLRY 426 NGGD ++V+ L N+L KL GYAGWNTS+NT+GT I++A+ + H+G T H +FLGLRY Sbjct: 376 NGGDLQIVRFLNSNNLLMKLGGYAGWNTSANTVGTAIAEAVDFYHFGNTVRHKNFLGLRY 435 Query: 427 AEDVCYCSVVRGE-LSDGPIQDMGFGKYLLDGQRGSVASMVEQRLRQELAVRIDGPEGRV 485 ED+ +CS VR + +++ P +M + + + G ++ +V+ L + + + ++ Sbjct: 436 VEDLGFCSSVREKVVNELPEYNMDY--FDIKESDGIISQVVKAGLEEFIKNELSSIGNKL 493 Query: 486 EITDCYMPWNRMFEVGLSVRFV 507 I +PW RMFEV + V +V Sbjct: 494 NILSLTLPWKRMFEVDMDVEYV 515 >B7R6A6.1 B7R6A6_9THEO Putative uncharacterized protein Length = 512 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 208/519 (40%), Positives = 300/519 (57%), Gaps = 25/519 (4%) Query: 3 KSYTIAFVPLDERPCNYGFPPLLARGTEFEVLRPPMQLMGLKKRPGDVDGLWTWFEEACC 62 + + I ++PLDERPCNY FP ++ ++ +++RPP +++G KK+P DVD LW W + Sbjct: 2 EKWRIMYIPLDERPCNYEFPKMIIDISDIDMIRPPKEILGCKKKPADVDKLWEWMRQNIE 61 Query: 63 QADGAVVALDTLLYGGIIPSRLHSXXXXXXXXXXXXXXXXXXXHPKLVIYAFQLIMRCPQ 122 VV++D L+YGGI+PSR+H + L I+AF LIMR P Sbjct: 62 GITHLVVSIDMLVYGGIVPSRIHQKQVEECLRSLLRLRELKKSNNNLKIFAFNLIMRTPS 121 Query: 123 YSLSDEEPDYYADWGREIFRKGFISHRKELGAASDEELQELAEIEDRLPREILDDYLGRR 182 Y+ S+EEPDYY ++G IFR G S + +L A++EE++E ++ +P EIL+DYL RR Sbjct: 122 YNSSEEEPDYYKEYGERIFRFGAFSDKIDLNIATEEEIKEFNALKREIPEEILEDYLRRR 181 Query: 183 SINIEANKLVLELVKEGIIGFMIFPQDDSAPFGHTAKDQQKVRSRITELDLELRAYMYPG 242 +N + N V++LVKE II F+I P DDS+ +G + +++K+ I ELDL R Y YPG Sbjct: 182 EVNHKINLSVVDLVKESIIDFLIIPMDDSSKYGFSPMERRKIMKYIDELDLTDRIYSYPG 241 Query: 243 ADEVGCTLLARMINKATGTVPLIYPRLSSVQGAFVTPLFEDRFFYETLKYQITAAGGLIA 302 ADEVGCTL AR N G P ++ R SS G V PL EDR ET+KYQI AAGG++ Sbjct: 242 ADEVGCTLTARAFNDIKGVKPAVFTRYSSENGKNVIPLLEDRRLGETVKYQIIAAGGIVT 301 Query: 303 SSAGEADLVLLVNTPGETMIEAASQQGSFFSY----DVYRNLMEIVE-YGNYILNHKGKP 357 + +AD +L++N P E + S+ + D RNL E VE +YI KGK Sbjct: 302 EDSEKADFILMINPPSEITQQIGDSWNSYLTRKDIGDPERNLNEFVEAIKDYI--EKGKN 359 Query: 358 VAVADVGYANGGDQKLVKMLREKNILFKLAGYAGWNTSSNTLGTVISQAMIYLHY----- 412 +VADV + NG D L+K++++ +L KL Y GWNTS+NTLGTVI+ +M Y Sbjct: 360 CSVADVAFLNGADNSLMKLIKKYGLLKKLLSYGGWNTSANTLGTVIAHSMASSFYINSDN 419 Query: 413 ---GRTQEHLDFLGLRYAEDVCYCSVVRGELSDGPIQDMGFGKYLLDGQRGSVASMVE-- 467 R + FL LRY ED Y VR +++ I G + L + ++ +++ Sbjct: 420 FTEDRKERSYRFLFLRYLEDWGYQYEVRTKVA-KEIDKYGVSYFDLGEKEKIISEVIKGE 478 Query: 468 -QRLRQELAVRIDGPEGRVEITDCYMPWNRMFEVGLSVR 505 ++ ++E D D YMPWNR+FEVG+ V+ Sbjct: 479 LEKFKKENLNEFDYE------FDVYMPWNRLFEVGIEVK 511 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,964,549,619 Number of extensions: 122647326 Number of successful extensions: 280939 Number of sequences better than 1.0e-05: 49 Number of HSP's gapped: 280738 Number of HSP's successfully gapped: 50 Length of query: 511 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 371 Effective length of database: 1,741,754,103 Effective search space: 646190772213 Effective search space used: 646190772213 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)