BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0018.p (191 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDH8.1 B3KDH8_9BACI Putative uncharacterized protein 265 1e-69 C0ZEH3.1 C0ZEH3_BREBN Putative uncharacterized protein 245 1e-63 B1D5N9.1 B1D5N9_9BACL Putative uncharacterized protein 239 8e-62 B3KD15.1 B3KD15_9BACI Putative uncharacterized protein 164 3e-39 Q2BBX0.1 Q2BBX0_9BACI Putative uncharacterized protein 102 2e-20 >B3KDH8.1 B3KDH8_9BACI Putative uncharacterized protein Length = 184 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 122/187 (65%), Positives = 152/187 (81%), Gaps = 3/187 (1%) Query: 5 VAHKFGQGLTPRQFVEGMTKNQQAFESWYEKFAWEDQDDRAYFESLNHRDDLRVLILAAD 64 +A+ G G++P+QF++GM KNQ F++ YE+F WE+++D+A+FESLN RDDLRVLILAAD Sbjct: 1 MANHLGTGISPQQFMDGMQKNQDTFKAGYEQFKWENEEDKAFFESLNFRDDLRVLILAAD 60 Query: 65 WCGDVVRNVPVVFRILETAGIKTEVLILEENQDVMDDFLTMGGRSVPIVIFADTGGYVLG 124 WCGDV RN+PVVFR +ETAGI+TEVLI+EEN DVMD FLTMG RS+P+VI +DTGG+VLG Sbjct: 61 WCGDVARNIPVVFRAMETAGIETEVLIMEENLDVMDQFLTMGARSIPVVIISDTGGHVLG 120 Query: 125 HWGPRXXXPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGEGTESHAVIAKEL 184 WGPR P HVQ M EFK+ NPDREA DY+ +A R+++ QAYGEG E HA I KEL Sbjct: 121 TWGPR---PAHVQKFMIEFKQNNPDREATDYQDNLAVTRQSIIQAYGEGYEFHAAIIKEL 177 Query: 185 RSLISGF 191 R L+SGF Sbjct: 178 RELMSGF 184 >C0ZEH3.1 C0ZEH3_BREBN Putative uncharacterized protein Length = 188 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 112/191 (58%), Positives = 142/191 (74%), Gaps = 3/191 (1%) Query: 1 MKQNVAHKFGQGLTPRQFVEGMTKNQQAFESWYEKFAWEDQDDRAYFESLNHRDDLRVLI 60 M NVAHKF GL P+ FVE MTKNQ +++W + F+WED+ DRA+F SL HRDDLR LI Sbjct: 1 MGANVAHKFRTGLKPQAFVESMTKNQDTYQNWSDAFSWEDEQDRAFFASLQHRDDLRCLI 60 Query: 61 LAADWCGDVVRNVPVVFRILETAGIKTEVLILEENQDVMDDFLTMGGRSVPIVIFADTGG 120 LAA+WCGDVVRN+PVV L+ + E++++EE+ D+MD+FLTMGGR++P+VIFADTGG Sbjct: 61 LAAEWCGDVVRNLPVVLHALKETDMPVEIMVMEEHLDLMDEFLTMGGRAIPVVIFADTGG 120 Query: 121 YVLGHWGPRXXXPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGEGTESHAVI 180 +VL WGPR P+HVQ++M FK++NPDR A DYE KI R M + YGEGT VI Sbjct: 121 HVLAKWGPR---PKHVQAVMTTFKQQNPDRNASDYEDKIKVARAEMLEQYGEGTGYQQVI 177 Query: 181 AKELRSLISGF 191 KELR L+S Sbjct: 178 VKELRELLSSI 188 >B1D5N9.1 B1D5N9_9BACL Putative uncharacterized protein Length = 189 Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 113/189 (59%), Positives = 141/189 (74%), Gaps = 4/189 (2%) Query: 1 MKQNVAHKFGQGLTPRQFVEGMTKNQQAFESWYEKFAWEDQDDRAYFESLNHRDDLRVLI 60 M ++VA K +G++P+QFVEGMTKN++AF+ WY+KF W DR +FESL R+DLRV I Sbjct: 1 MSRSVAEKLNKGISPQQFVEGMTKNKEAFQGWYDKFEWASDSDREFFESLKSRNDLRVFI 60 Query: 61 LAADWCGDVVRNVPVVFRILETAGIKTEVLILEENQDVMDDFLTMGGRSVPIVIFADTGG 120 L ADWCGDVVRN+PVVFR LET I EVLI+EEN D MD FLTMGGRSVP+VI D G Sbjct: 61 LMADWCGDVVRNIPVVFRALETGEIPVEVLIMEENLDTMDQFLTMGGRSVPVVIVTDAEG 120 Query: 121 YVL-GHWGPRXXXPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGEGTESHAV 179 + G WGPR P ++Q M FK+ENPDREA DY+ K+AE RK + + YGEGT HA+ Sbjct: 121 KAIHGTWGPR---PTYIQEPMVLFKKENPDREAADYQDKLAETRKEIMRRYGEGTGYHAL 177 Query: 180 IAKELRSLI 188 + +E+R+LI Sbjct: 178 VVQEIRALI 186 >B3KD15.1 B3KD15_9BACI Putative uncharacterized protein Length = 202 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 125/199 (62%), Gaps = 14/199 (7%) Query: 4 NVAHKFGQGLTPRQFVEGMTK----------NQQAFESWYEKFAWEDQDDRAYFESLNHR 53 ++ HK GQG++PRQF+EGM + ++ F Y++F W+D + + +F N R Sbjct: 6 HLRHKIGQGISPRQFMEGMKRREMKLSSIPNTKEQFRQVYDRFQWDDPEIQRFFAERNER 65 Query: 54 DDLRVLILAADWCGDVVRNVPVVFRILETAGIKTEVLILEENQDVMDDFLTMGGRSVPIV 113 L LIL DWC DV+ NVPV+FR++E + I TEVLI+EE+ + MD FLT GGR+ PI Sbjct: 66 GQLHCLILCTDWCPDVIWNVPVLFRVMEYSRIPTEVLIMEEHLETMDLFLTGGGRAQPIA 125 Query: 114 IFADTG-GYVLGHWGPRXXXPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGE 172 +F + G VLG WG R P ++Q++M EFKR++ D++A Y+ ++ +V +G+ Y + Sbjct: 126 LFLNAATGAVLGQWGAR---PAYIQNVMDEFKRKHADKQADSYQEQLDQVYTRIGELYHD 182 Query: 173 GTESHAVIAKELRSLISGF 191 G + V+ +EL+ + F Sbjct: 183 GNDYRKVMLQELKERFTSF 201 >Q2BBX0.1 Q2BBX0_9BACI Putative uncharacterized protein Length = 183 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 11/180 (6%) Query: 9 FGQGLTPRQFVEGMTKNQQAFESWYEKFAWEDQDDRAYFESLNHRDDLRVLILAADWCGD 68 F +GLT ++VEGM+ N+Q ES KF+ ++++ A ++ + L+V++L DWCGD Sbjct: 7 FAKGLTFSEYVEGMSVNKQEMESIENKFSLTEEEE-AKLGNVKGKG-LKVIVLTEDWCGD 64 Query: 69 VVRNVPVVFRILETAGIKTEVLILEENQDVMDDFLTMG-GRSVPIVIFADTGGYVLGHWG 127 + N+P++ I ++T ++ +EN ++MD +LT G RS+PI IF D G WG Sbjct: 65 AMLNIPILMHIARETDMETRFILRDENLELMDQYLTNGTARSIPIFIFIDGDGQEKAVWG 124 Query: 128 PRXXXPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGEGTE-----SHAVIAK 182 PR E VQ+ + + + P ++ D++ K + K M AY E + + ++IAK Sbjct: 125 PR---AETVQAFVDNERAQLPSADSEDFKEKQGIMFKKMKAAYQEDEQVWHDVAASIIAK 181 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,172,491,057 Number of extensions: 47424262 Number of successful extensions: 112899 Number of sequences better than 1.0e-05: 132 Number of HSP's gapped: 112774 Number of HSP's successfully gapped: 132 Length of query: 191 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 63 Effective length of database: 1,854,806,283 Effective search space: 116852795829 Effective search space used: 116852795829 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)