BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0100.0010.p
         (127 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KDG9.1 B3KDG9_9BACI Putative uncharacterized protein                157   2e-37
B1DHA4.1 B1DHA4_9BACL Putative uncharacterized protein                129   1e-28
C0ZBP2.1 C0ZBP2_BREBN Putative uncharacterized protein                122   1e-26

>B3KDG9.1 B3KDG9_9BACI Putative uncharacterized protein
          Length = 126

 Score =  157 bits (398), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/127 (62%), Positives = 89/127 (70%), Gaps = 1/127 (0%)

Query: 1   MLRLGERIVIVADAFEQGLPIGDYGYLIAYDRNPDNAFDYVIRVPQANRNFYVTAEDVXX 60
           MLRLGE+I IVADAFEQ LPIG YGY+IAYDRNPDNAFDYVIR+P  NRNF+V A+DV  
Sbjct: 1   MLRLGEKITIVADAFEQNLPIGQYGYIIAYDRNPDNAFDYVIRIPSLNRNFFVPADDVEL 60

Query: 61  XXXXXXXXXXXXXHEALIDYALSTHNEKLFHHLMNGGDXXXXXXXXXXXXSLSQADFIKQ 120
                         EALID+ALST+NEKLF  +MNG              ++SQADFIKQ
Sbjct: 61  ESIVLKQEAERVEREALIDFALSTYNEKLFRQVMNGE-LESVEEEEETKEAMSQADFIKQ 119

Query: 121 VNLRAWI 127
           VNLRAWI
Sbjct: 120 VNLRAWI 126


>B1DHA4.1 B1DHA4_9BACL Putative uncharacterized protein
          Length = 126

 Score =  129 bits (323), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 82/127 (64%), Gaps = 1/127 (0%)

Query: 1   MLRLGERIVIVADAFEQGLPIGDYGYLIAYDRNPDNAFDYVIRVPQANRNFYVTAEDVXX 60
           ML LG ++VI+AD FEQ LP+G+ GY+IAYDRNPDN FDYV+RVP ANRNF V  EDV  
Sbjct: 1   MLSLGAKVVIIADQFEQNLPLGESGYIIAYDRNPDNVFDYVVRVPAANRNFLVPDEDVEL 60

Query: 61  XXXXXXXXXXXXXHEALIDYALSTHNEKLFHHLMNGGDXXXXXXXXXXXXSLSQADFIKQ 120
                         EALIDYAL+T NE+LF+ ++ G +              ++ DFI+Q
Sbjct: 61  EEVLLQEEVDRIEREALIDYALATFNEELFNRIVKGEEKPEEKDNTGGENQTTE-DFIRQ 119

Query: 121 VNLRAWI 127
           VNL+AWI
Sbjct: 120 VNLKAWI 126


>C0ZBP2.1 C0ZBP2_BREBN Putative uncharacterized protein
          Length = 124

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 81/127 (63%), Gaps = 3/127 (2%)

Query: 1   MLRLGERIVIVADAFEQGLPIGDYGYLIAYDRNPDNAFDYVIRVPQANRNFYVTAEDVXX 60
           M +LG+R+VIVAD+FEQGLP+G+YGYLIA DRNPD+AF +V+R+P+ +++  V  ED+  
Sbjct: 1   MFKLGQRVVIVADSFEQGLPLGEYGYLIARDRNPDSAFSWVLRIPKIDKHIAVVEEDIAL 60

Query: 61  XXXXXXXXXXXXXHEALIDYALSTHNEKLFHHLMNGGDXXXXXXXXXXXXSLSQADFIKQ 120
                        HEAL+D+AL+T NE LF  LM   D              S  +FI++
Sbjct: 61  EEQLLEEEANRISHEALLDFALATRNEALFRQLMGMEDAEEANDEPAKE---SMEEFIRK 117

Query: 121 VNLRAWI 127
           VN++AWI
Sbjct: 118 VNIKAWI 124


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.324    0.141    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 591,408,186
Number of extensions: 17449516
Number of successful extensions: 25682
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 25676
Number of HSP's successfully gapped: 3
Length of query: 127
Length of database: 3,060,696,203
Length adjustment: 92
Effective length of query: 35
Effective length of database: 2,193,962,823
Effective search space: 76788698805
Effective search space used: 76788698805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 126 (53.1 bits)