BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0003.p (579 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDF9.1 B3KDF9_9BACI Glycoside hydrolase family 18 606 e-171 B1DHB1.1 B1DHB1_9BACL Glycoside hydrolase family 18 500 e-139 C0Z688.1 C0Z688_BREBN Putative uncharacterized protein 444 e-122 B2A674.1 B2A674_NATTJ Glycoside hydrolase family 18 390 e-106 Q2B800.1 Q2B800_9BACI Spore peptidoglycan hydrolase 386 e-105 >B3KDF9.1 B3KDF9_9BACI Glycoside hydrolase family 18 Length = 604 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 294/548 (53%), Positives = 392/548 (71%), Gaps = 3/548 (0%) Query: 31 IIAAAAYWVVFYVLPNRLHTDPDWKGLEQPVFVKGELTGYSASGTGDAXXXXXXXXQKYV 90 +IAA +WVV + PN+ +T PDW+G+++P+FV+GEL + A G+G+ Q+ V Sbjct: 57 LIAAGVWWVVTTLFPNQTYTVPDWRGMDKPIFVQGELKEHPALGSGEELLLPITVIQESV 116 Query: 91 DSSIRYEEDTKSVILSTDNELLYMQEDTKTASLNNKPLQLRLAPEEKNGMTYLPADTLEN 150 D++IRYE++T+S+I++T + M+ D+ LN K + L APE NG+ Y+P L+ Sbjct: 117 DANIRYEQETESIIITTSESVFRMKMDSTKGELNGKTVTLPYAPELVNGIAYVPLKPLKQ 176 Query: 151 LYGFEVEEDKDTGAVLLMTAGETVPLGKVKGEEGGKTQPLRSEATIHAPIVADMSPGTVV 210 YG V ED TGA++LM AG+ + L K + T LR +PIV DM G + Sbjct: 177 HYGVAVHEDSVTGAIILMRAGDAIQLAKAAPGKPEDTVALRESGEKKSPIVLDMPAGERI 236 Query: 211 KIWNSDNEDWLYVQMDNGFTGYVKAKDIIQDGE-KAVEVKPAAPSRAERSWKGKPVNLYW 269 ++W + E WL+VQ DNG+TGYV K+ I+ GE K + PSRAE WK K VNL W Sbjct: 237 RVWR-EEEGWLFVQADNGYTGYV-LKEQIELGELKEIPALKQTPSRAELEWKDKSVNLVW 294 Query: 270 EAVYERKPNPANFGALPGVNVVSPTWFEIVDIKGNVRSKADSAYVQWAHQQGMEVWGLLT 329 EAVY + P+ + G LPGVNVVSPTWF IVD +G V+SKA YV WAH + EVWGL+ Sbjct: 295 EAVYTKNPSTDSIGELPGVNVVSPTWFSIVDGEGTVKSKAVKHYVSWAHNRNKEVWGLMD 354 Query: 330 NSFDADLTTQALSSYEKRMNAIVQMLEYADLYGLDGINIDFENVYTKDGENVTQFMRELK 389 NSFD DLTT+ALS++++R + I QML YA Y LDGINIDFENVYTKD ++V QF+RE+K Sbjct: 355 NSFDPDLTTEALSTFDRRSHIIEQMLAYAKQYNLDGINIDFENVYTKDKDHVVQFVREMK 414 Query: 390 PMAQAKNLIVSMDVTPKSNSEMWSLFLDRRALGAVTDFLIVMAYDEHWASSPTAGSVASL 449 P+A+A+ L+VS+DVTPKSNSEMWSLFLDR+ LG D+++VMAYDEHWA+SP AGSV+SL Sbjct: 415 PLAKARGLVVSIDVTPKSNSEMWSLFLDRKRLGETVDYMMVMAYDEHWATSPKAGSVSSL 474 Query: 450 PWVEKSVSRILEEDDVPAEKLILGIPLYTRIWSETTKDGKTKVSSKAVSMNAVQEILAEK 509 PW E+SV RI+EED VP KL+LG+PLYTR+W+ET++ G+TKVSSKA+ M +Q +L E+ Sbjct: 475 PWAEQSVRRIMEEDAVPPSKLVLGVPLYTRVWTETSEAGETKVSSKAIGMEKLQALLKEQ 534 Query: 510 KLKPVLDKDSGQNYVEYTEDGVLRKIWIEDKVSLKARVELAKSFGLGGIGSWNRSFAVPE 569 K+K LD +GQNYV++TE ++KIW+ED SL++RV++AK LGGI SWNRSFAVPE Sbjct: 535 KVKGSLDAGTGQNYVQFTEGESIKKIWMEDGTSLQSRVKMAKKLELGGIASWNRSFAVPE 594 Query: 570 AWETLQQI 577 W L+ I Sbjct: 595 TWHVLKTI 602 >B1DHB1.1 B1DHB1_9BACL Glycoside hydrolase family 18 Length = 572 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 260/552 (47%), Positives = 357/552 (64%), Gaps = 18/552 (3%) Query: 31 IIAAAAYWVVFY-VLPNRLHTDPDWKGLEQPVFVKGELTGYSASGTGDAXXXXXXXXQKY 89 I AA W ++ +PN+ T PD+ G+ P+ +GE+ A D QK Sbjct: 27 IAAAMGVWFIYMKFIPNQHITVPDY-GMAHPITYQGEIMDQGAFIQNDEVMLPISALQKA 85 Query: 90 V--DSSIRYEEDTKSVILSTDNELLYMQEDTKTASLNNKPLQLRLAPEEKNGMTYLPADT 147 + D + YE +T S+IL+T N++L ++ D TA LN KP +L +A + K+ Y+P Sbjct: 86 LGPDEPVYYEAETGSIILTTTNKVLRLKTDALTAELNQKPYELHIAAQTKDDAVYIPITP 145 Query: 148 LENLYGFEVEEDKDTGAVLLMTAGETVPLGKVKGEEGGKTQPLRSEATIHAPIVADMSPG 207 LE LYG + E D+G V+L+ AGE++ GK +G +R++ +IH+PI + G Sbjct: 146 LEELYGLKTEYKADSGIVILLQAGESIQQGKALKSKGSA---IRTKTSIHSPIAEKVPQG 202 Query: 208 TVVKIWNSDNEDWLYVQMDNGFTGYVKAKDI-IQDGEKAVEVKPAAPSRAERSWK--GKP 264 V+IW ++ WL+VQ G GY++ ++ + EK V AA A WK G Sbjct: 203 ETVRIWGEEH-GWLFVQGPQGQLGYMQKSNVELASIEK---VPQAAKEEAFIPWKVLGSK 258 Query: 265 VNLYWEAVYERKPNPANFGALPGVNVVSPTWFEIVDIKGNVRSKADSAYVQWAHQQGMEV 324 +NL WEAVYE+ P P + G L GVNVVSPTWFE+ D KG ++ KAD AYV+WAH QGM+V Sbjct: 259 INLTWEAVYEKNPAPDSIGTLKGVNVVSPTWFELQDGKGTIKGKADPAYVRWAHNQGMQV 318 Query: 325 WGLLTNSFDADLTTQALSSYEKRMNAIVQMLEYADLYGLDGINIDFENVYTKDGENVTQF 384 W L +N F+ D TT+AL+ + R I Q+L +A+ Y L GINIDFENV T D N+ QF Sbjct: 319 WALFSNGFEPDQTTEALAKADTRFKMIRQLLAFAETYHLQGINIDFENVRTSDKANLVQF 378 Query: 385 MRELKPMAQAKNLIVSMDVTPKSNSEMWSLFLDRRALGAVTDFLIVMAYDEHWASSPTAG 444 +REL P+ + L+VS+DVTPKSNSE+WSLFLDR ALG D+++VMAYDEHWASSP AG Sbjct: 379 VRELTPLFHEQGLVVSIDVTPKSNSELWSLFLDRSALGHTVDYMMVMAYDEHWASSPEAG 438 Query: 445 SVASLPWVEKSVSRILEEDDVPAEKLILGIPLYTRIWSETTKDGKTKVSSKAVSMNAVQE 504 SVASL W +V RI+EED V A K+IL +PLYTRIW+E ++G KV+SKAV M+ V++ Sbjct: 439 SVASLGWTASAVKRIIEEDGVSANKIILSMPLYTRIWTE--QNG--KVTSKAVGMDKVKD 494 Query: 505 ILAEKKLKPVLDKDSGQNYVEYTEDGVLRKIWIEDKVSLKARVELAKSFGLGGIGSWNRS 564 I+A KKL P LD+ +GQNYVEY E+G L +IWIED +S+++RV+L + GL G+ +WNRS Sbjct: 495 IIASKKLTPKLDETAGQNYVEYKENGALNRIWIEDALSIQSRVKLMRELGLAGVATWNRS 554 Query: 565 FAVPEAWETLQQ 576 F W + + Sbjct: 555 FQTSSIWPVIDE 566 >C0Z688.1 C0Z688_BREBN Putative uncharacterized protein Length = 577 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 232/496 (46%), Positives = 324/496 (65%), Gaps = 12/496 (2%) Query: 90 VDSSIRYEEDTKSVILSTDNELLYMQEDTKTASLNNKPLQLRLAPEEKNGMTYLPADTLE 149 +D +I ++E T+SVI++T +++L M+ A LN KP+ L + +E +G Y+P D LE Sbjct: 88 IDPAIFWDEPTRSVIVTTKDKVLRMESGEVVAYLNKKPVDLLVPVKEVDGTRYVPLDPLE 147 Query: 150 NLYGFEVEEDKDTGAVLLMTAGETVPLGKVKGEEGGKTQPLRSEATIHAPIVADMSPGTV 209 LY + E DTG +++ G + KV E + Q +R+ A+ PIVA++S G V Sbjct: 148 KLYPYSFERKADTGVLVVEKEGYEIQQAKVIAAE--EKQAVRTGASHRTPIVAELSAGEV 205 Query: 210 VKIWNSDNEDWLYVQMDNGFTGYVKAKDI-IQDGEKAVEVKPAAPSRAERSWK--GKPVN 266 V + E+W +V +G G++ K I + D K A + +WK GK +N Sbjct: 206 VDVLGK-KENWYHVLTASGVGGFISEKSIGMTDVRKVQLEHTTATGQQHAAWKPEGK-IN 263 Query: 267 LYWEAVYERKPNPANFGALPGVNVVSPTWFEIVDIKGNVRSKADSAYVQWAHQQGMEVWG 326 L WE V + P+ + GALPGVNVVSPTWFE+ D +G + ++AD AYV+WAH++G +VWG Sbjct: 264 LVWEHVVSKNPDVSKIGALPGVNVVSPTWFEMKDAEGKLLNRADPAYVKWAHKRGYKVWG 323 Query: 327 LLTNSFDADLTTQALSSYEKRMNAIVQMLEYADLYGLDGINIDFENVYTKDGENVTQFMR 386 L+TN F+ D T LSSY+KR I Q+L YA LY LDGINIDFENVY ++ E + QF+R Sbjct: 324 LVTNGFNPDWTKSVLSSYDKRDQLIAQLLYYAHLYDLDGINIDFENVYLEEKEELVQFVR 383 Query: 387 ELKPMAQAKNLIVSMDVTPKSNSEMWSLFLDRRALGAVTDFLIVMAYDEHWASSPTAGSV 446 EL P + L +++DVT KSN++ WS+FLDR+AL V D++ VM YDEHWA+SP AGSV Sbjct: 384 ELTPYLHQQGLTLTIDVTIKSNAKQWSMFLDRKALAEVVDYVAVMTYDEHWAASPKAGSV 443 Query: 447 ASLPWVEKSVSRILEEDDVPAEKLILGIPLYTRIWSETTK-DGKTKVSSKAVSMNAVQEI 505 ASLPWVE+ + +LEE VP EKL+LG+P YTR+W+E + DG KVSSKA SM QE Sbjct: 444 ASLPWVERGLQGVLEE--VPNEKLLLGVPFYTRLWTEAKQADGTVKVSSKAYSMTKAQEW 501 Query: 506 LAEKKLKPVLDKDSGQNYVEYTE--DGVLRKIWIEDKVSLKARVELAKSFGLGGIGSWNR 563 + E+KL PV+D+ SGQ+YVEY + DG + K+WIED S+K R+E+ + L G+ SW R Sbjct: 502 INERKLTPVMDEASGQHYVEYKDPNDGNVYKMWIEDVTSMKKRMEIVNKYDLAGVASWRR 561 Query: 564 SFAVPEAWETLQQISK 579 F VPE W+ + + K Sbjct: 562 GFEVPEIWQAIDETLK 577 >B2A674.1 B2A674_NATTJ Glycoside hydrolase family 18 Length = 579 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 210/545 (38%), Positives = 310/545 (56%), Gaps = 24/545 (4%) Query: 41 FYVLPNRLHTDPDWKGLEQP--VFVKGELTGYSASGTGDAXXXXXXXXQKYVDSSIRYEE 98 Y+ P+R +P + EQ ++ +L + + D +K +D I Y++ Sbjct: 34 LYLTPSRQKVEP-YPDSEQTRLIYEDQDLGTENTALVEDEVYLSKSFIEKSLDPYIYYDD 92 Query: 99 DTKSVILSTDNELLYMQEDTKTASLNNKPLQLRLAPEEKNGMTYLPADTLENLYGFEVEE 158 + ++T N+ MQ D TA++N++ +L+ +P+ G +LP+D LE LY V+ Sbjct: 93 QGDYITITTKNKFFQMQTDNLTAAVNDEERELQFSPKLIQGEPFLPSDILEELYPITVQH 152 Query: 159 DKDTGAVLLMTAGETVPLGKVKGEEGGKTQPLRSEATIHAPIVADMSPGTVVKIWNSDNE 218 ++D VL+ + V G K E +R E +I I+ + + + I++ Sbjct: 153 NQDDNLVLIDNLEKQVLKGYAKENETR----VREEPSIRTGIIESLDKQSKITIYHQSG- 207 Query: 219 DWLYVQMDNGFTGYVKAKDIIQD----GEKAVE---VKPAAPSRAERSWKGKPVNLYWEA 271 DW +++ + G+ GYV++ DI D EK +E V P PSR G+P+NL WE Sbjct: 208 DWFFIRTEKGYLGYVQSSDITLDELSIREKHIEDDDVDP--PSRP----FGEPINLTWEH 261 Query: 272 VYERKPNPANFGALPGVNVVSPTWFEIVDIKGNVRSKADSAYVQWAHQQGMEVWGLLTNS 331 V PNP + LPGVNV+SPTWF + D +GN+ ++AD +YV WAH M+VWGL +N+ Sbjct: 262 VISENPNPNDLPDLPGVNVISPTWFHLQDPEGNIVNQADKSYVNWAHDNDMQVWGLFSNN 321 Query: 332 FDADLTTQALSSYEKRMNAIVQMLEYADLYGLDGINIDFENVYTKDGENVTQFMRELKPM 391 FD DLT++ L E R NAI Q+L Y+D+Y LDGIN+DFEN++ D + TQF+RE+ P Sbjct: 322 FDPDLTSEFLEDPEARRNAIEQILLYSDIYNLDGINLDFENIHIDDRDAYTQFVREISPF 381 Query: 392 AQAKNLIVSMDVTPKSNSEMWSLFLDRRALGAVTDFLIVMAYDEHWASSPTAGSVASLPW 451 + + L+VS+DVT S SE WSL DR A D+++VMAYDEHW SP AGSV+SLPW Sbjct: 382 LREQGLVVSIDVTFISQSENWSLSYDRHAFSKTVDYIMVMAYDEHWGDSPVAGSVSSLPW 441 Query: 452 VEKSVSRILEEDDVPAEKLILGIPLYTRIW-SETTKDGKTKVSSKAVSMNAVQEILAEKK 510 VE+++ IL VP ++LILGIP YTR+W E DG VSS A M ++ IL Sbjct: 442 VEENLEEILSV--VPNDQLILGIPFYTRLWEEEKNDDGSISVSSSAYGMEQIKNILENND 499 Query: 511 LKPVLDKDSGQNYVEYTEDGVLRKIWIEDKVSLKARVELAKSFGLGGIGSWNRSFAVPEA 570 D D+ Q Y EY ++ + W+E + S+K R+ L + L G+ SW R F E Sbjct: 500 ADITFDDDTKQYYAEYEDNDTRYRTWLETEESIKKRLNLVHEYNLAGVASWRRGFEKEEI 559 Query: 571 WETLQ 575 WE ++ Sbjct: 560 WEVIK 564 >Q2B800.1 Q2B800_9BACI Spore peptidoglycan hydrolase Length = 572 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/548 (39%), Positives = 321/548 (58%), Gaps = 12/548 (2%) Query: 31 IIAAAAYWVVFYVLPNRLHTDPDWKGLEQPVFVKGELTGYSASGTGDAXXXXXXXXQKYV 90 ++ A ++F++ P D+ E P+ +G+ G + + G+ +K + Sbjct: 23 VLLAVISGIIFWLYPFASPVKEDYFSGENPIIFEGKQDGNAWTDNGNVYLPLSLLQEK-L 81 Query: 91 DSSIRYEEDTKSVILSTDNELLYMQEDTKTASLNNKPLQLRL-APEEKNGMTYLPADTLE 149 D SI ++E ++S+IL+T N+++ M D + +N+KP++L+L A K+G Y+ + + Sbjct: 82 DDSIVFDERSQSIILTTKNKVVQMPTDALSYYVNSKPVELQLPAAMNKSGGLYISIEEIR 141 Query: 150 NLYGFEVEEDKDTGAVLLMTAGETVPLGKVKGEEGGKTQ-PLRSEATIHAPIVADMSPGT 208 Y +DTGA+ + GETV ++ ++ K + LR+E + +P AD Sbjct: 142 RYYPLAYTVLEDTGAIWIQKDGETVQKAIIRDQDISKERLRLRTEPDLQSPYTADAEANE 201 Query: 209 VVKIWNSDNEDWLYVQMDNGFTGYVKAKDIIQDGEKAVEVKPAAPSRAERSWKGKPVNLY 268 + I + E + + + +G GY+K + +I+ + V VK + E P++L Sbjct: 202 ELYIEETKGE-YYFARKSDGRAGYIKKEYVIKGEQTEVSVK-VEEYKPELKKIDGPIHLT 259 Query: 269 WEAVYERKPNPANFGALPGVNVVSPTWFEIVDIKGNVRSKADSAYVQWAHQQGMEVWGLL 328 WEAVY P+ A ++PGVNVVSPTWFE+ G+V++ YV+WAH +G +VWGL Sbjct: 260 WEAVYSENPDHAALPSMPGVNVVSPTWFELAGEDGSVKNLGSGDYVKWAHGRGYQVWGLF 319 Query: 329 TNSFDADLTTQALSSYEKRMNAIVQMLEYADLYGLDGINIDFENVYTKDGENVTQFMREL 388 +N+FDA+LT Q +E R I +L Y+ +Y LDGIN+D ENV +DG VTQF+RE Sbjct: 320 SNAFDAELTHQTFKDFETRQKIIRSLLHYSQIYKLDGINLDIENVNQEDGPLVTQFVREA 379 Query: 389 KPMAQAKNLIVSMDVTPKSNSEMWSLFLDRRALGAVTDFLIVMAYDEHWASSPTAGSVAS 448 P L VSMD+T S+S WS F +R L + D+L VMAYDEHWA+SP AGSVAS Sbjct: 380 TPYFHQAGLTVSMDITFISSSGNWSAFYERDKLAGIVDYLAVMAYDEHWATSPVAGSVAS 439 Query: 449 LPWVEKSVSRILEEDDVPAEKLILGIPLYTRIWSETTKDGKTKVSSKAVSMNAVQEILAE 508 LPWVE ++ +LE VP EKLILG+PLY R+W E + G +SS+A+SM V+E L E Sbjct: 440 LPWVESNLQALLEV--VPKEKLILGVPLYARLWEEKDEGG---ISSEALSMEQVKEWLTE 494 Query: 509 KKLKPVLDKDSGQNYVEY--TEDGVLRKIWIEDKVSLKARVELAKSFGLGGIGSWNRSFA 566 PV D+ SGQNY EY +D KIW+ED++SL+ R E+A GL G+GSW+R FA Sbjct: 495 TGAVPVYDEASGQNYAEYYSVKDKATYKIWLEDEMSLRKRAEIADRHGLAGVGSWSRYFA 554 Query: 567 VPEAWETL 574 AW L Sbjct: 555 DQSAWLAL 562 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,438,938,179 Number of extensions: 147353581 Number of successful extensions: 279716 Number of sequences better than 1.0e-05: 411 Number of HSP's gapped: 279334 Number of HSP's successfully gapped: 413 Length of query: 579 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 438 Effective length of database: 1,732,333,088 Effective search space: 758761892544 Effective search space used: 758761892544 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)