BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0001.p (295 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDF7.1 B3KDF7_9BACI Putative uncharacterized protein 226 2e-57 B1DHB3.1 B1DHB3_9BACL Putative uncharacterized protein 172 4e-41 B7GIK8.1 B7GIK8_ANOFW Uncharacterized conserved protein 141 6e-32 C5D5W3.1 C5D5W3_9BACI Putative uncharacterized protein 138 7e-31 Q2B321.1 Q2B321_9BACI Putative uncharacterized protein 134 7e-30 >B3KDF7.1 B3KDF7_9BACI Putative uncharacterized protein Length = 293 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 185/290 (63%), Gaps = 2/290 (0%) Query: 5 MELSNLTLFSGETFDESVLGAVALHQTGSAPFQSALLHDFDMVVLMLHEEQEKERIITHT 64 MEL+N + + G T DE +GA+A + + +L+HDF++ ++++++ E I H+ Sbjct: 1 MELTNFSFYYGNTVDEEAVGAIAYRNSDKMQ-RGSLVHDFEVNIVVVYDGTPDEPPIQHS 59 Query: 65 MAGERRTQSVHVGLSALERAVMAGDNNELFTSLIAGEVIWDPKGILGEMRREIIQFQGPI 124 + G R Q + +GL L R ++ G + L L+ G+VI D + L +RR+ ++F P Sbjct: 60 IVGGERCQVLSIGLDELHRELLRGTHKVLIKCLLEGDVIKDNQDRLSNLRRDFLRFAEPF 119 Query: 125 KERILFMEFSRFLHMYVKSKRYMEAGCTMDAYNCVLIALYHWARIEVSEAGCFPDPAVWE 184 +E+ LF+ F+ FL Y+ +K ++ +DAY+ +L L+HW +E+ E G P+ AVWE Sbjct: 120 REQKLFIGFAHFLQKYMDAKMLLKEERVLDAYHTLLEGLHHWGELELIERGIHPESAVWE 179 Query: 185 QIKGLNSSVHKLYEELTVSTETLDQRVELILLACEFSIMSKMSDCCTILLNILGSRKEPW 244 QI GLN+ V KLYEELTVSTETL QRVEL LLA EFS++SK+ +LL IL SR+ PW Sbjct: 180 QITGLNTPVRKLYEELTVSTETLGQRVELALLAYEFSMISKLESSSALLLRILRSRRNPW 239 Query: 245 SIKELLQHSGLSQLGAELPLVLRKLVSRSQIREIASWAEDAGDG-HAVRY 293 +I+EL+ H L+ + ELP+V+RKLV RS ++E+ W E G A+RY Sbjct: 240 TIQELVLHPELAPVCKELPIVMRKLVYRSLVKEVPLWRESRSYGSEAIRY 289 >B1DHB3.1 B1DHB3_9BACL Putative uncharacterized protein Length = 289 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 156/259 (60%), Gaps = 5/259 (1%) Query: 21 SVLGAVALHQTGSAPFQSALLHDFDMVVLMLHEEQEKERIITHTMAGERRTQSVHVGLSA 80 V G VA+ P+ + L+ D++VL++ E E H RR V Sbjct: 16 DVAGLVAIE--NPYPY-NPLIEGLDVLVLVVRESGANE-TTEHVCQQGRRIMVRTVDTGR 71 Query: 81 LERAVMAGDNNELFTSLIAGEVIWDPKGILGEMRREIIQFQGPIKERILFMEFSRFLHMY 140 LE+ + AG + + ++ GE++ + L +R +++ F ++E+ F EFS FL Y Sbjct: 72 LEQWI-AGRSGSVIQWMVRGEILMERDNYLTNIREQLMLFPDIMREQKRFAEFSGFLRTY 130 Query: 141 VKSKRYMEAGCTMDAYNCVLIALYHWARIEVSEAGCFPDPAVWEQIKGLNSSVHKLYEEL 200 +++K+ +E +DA++ V+ AL+HWA I + E G P+ VW+QI+ ++ V+KLYEEL Sbjct: 131 LQAKQDLEDNHILDAHSHVMTALHHWAHIVLIEEGHHPELTVWKQIRRVHPGVYKLYEEL 190 Query: 201 TVSTETLDQRVELILLACEFSIMSKMSDCCTILLNILGSRKEPWSIKELLQHSGLSQLGA 260 T S E+L+QRV L++LACEF++M+KM CC++L + SR+EPW+I EL + + +L Sbjct: 191 TASPESLEQRVRLVMLACEFTVMNKMKSCCSLLFEAISSRQEPWTICELQNYPPIQELHI 250 Query: 261 ELPLVLRKLVSRSQIREIA 279 +L LV++ LV R+ +RE+A Sbjct: 251 DLSLVVQNLVKRAYVREVA 269 >B7GIK8.1 B7GIK8_ANOFW Uncharacterized conserved protein Length = 295 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 76/234 (32%), Positives = 136/234 (58%), Gaps = 4/234 (1%) Query: 44 FDMVVLMLHEEQEKERIITHTMAGERRTQSVHVGLSALERAVMAGDNNELFTSLIAGEVI 103 FD+++ ++ E E+ I H + GE+ V ++ V+ G N ++ L+ G+++ Sbjct: 42 FDVILFVIVREGEEAVFIKHYVFGEKSASLYVVDERRVKEWVLLGSNRKVINWLLNGKIL 101 Query: 104 WDPKGILGEMRREIIQFQGPIKERILFM--EFSRFLHMYVKSKRYMEAGCTMDAYNCVLI 161 ++ +G++R+ ++QF P +ER + M EF++ + Y++ + + E +DAYN VL Sbjct: 102 FERNEYIGQLRQRLLQF--PEEERKVKMGIEFAKLVRRYIEGRSFFEKDQWLDAYNHVLH 159 Query: 162 ALYHWARIEVSEAGCFPDPAVWEQIKGLNSSVHKLYEELTVSTETLDQRVELILLACEFS 221 AL+H AR+ + E G +P+ VW Q+K + ++KLY EL S E LD+R++L+ LA +F Sbjct: 160 ALHHLARLSIIENGFYPEVTVWNQVKQIEPQIYKLYAELVGSEEPLDKRLQLLFLASDFF 219 Query: 222 IMSKMSDCCTILLNILGSRKEPWSIKELLQHSGLSQLGAELPLVLRKLVSRSQI 275 I SK+ + L+ +L R+ WS+ +LL LS G +L ++L LV + I Sbjct: 220 IHSKLKQGASHLIQVLEKRETSWSMADLLNEKELSVYGVDLEILLEFLVEKHLI 273 >C5D5W3.1 C5D5W3_9BACI Putative uncharacterized protein Length = 292 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 132/237 (55%) Query: 37 QSALLHDFDMVVLMLHEEQEKERIITHTMAGERRTQSVHVGLSALERAVMAGDNNELFTS 96 SA+ F +V+L++ + H ++GE + V + L ++ G + ++ Sbjct: 30 NSAVTDTFHIVLLVVTTNMAPPIFVKHYVSGEEKAALYVVDETKLNEWLLLGSHRKIIDW 89 Query: 97 LIAGEVIWDPKGILGEMRREIIQFQGPIKERILFMEFSRFLHMYVKSKRYMEAGCTMDAY 156 + G++++D + ++R + +F +++ + +EF++ + Y+ K + EA +DAY Sbjct: 90 IFYGKILFDRNDYIYQLRNRMKEFPEEMRQLKMGIEFAKLIRRYMDGKAFFEADQLLDAY 149 Query: 157 NCVLIALYHWARIEVSEAGCFPDPAVWEQIKGLNSSVHKLYEELTVSTETLDQRVELILL 216 N V+ AL+H AR+ V E G +P+ VW QIK +++ ++KLYEEL S E L +R+EL+ L Sbjct: 150 NHVIHALHHLARLAVIEQGFYPEVTVWNQIKQMDAQIYKLYEELVSSEEPLQKRLELLFL 209 Query: 217 ACEFSIMSKMSDCCTILLNILGSRKEPWSIKELLQHSGLSQLGAELPLVLRKLVSRS 273 A EF I S++ L +L ++ WSI E++QH LS +L ++L LV + Sbjct: 210 ASEFLIHSRIPSGAAHLFKVLREKEGAWSIAEIMQHPELSSYSVDLIIMLEYLVEKK 266 >Q2B321.1 Q2B321_9BACI Putative uncharacterized protein Length = 292 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/248 (32%), Positives = 131/248 (52%), Gaps = 5/248 (2%) Query: 44 FDMVVLMLHEEQEKERIITHTMAGERRTQSVHVGLSALERAVMAGDNNELFTSLIAGEVI 103 FD V+L++ +E E + H +++ V S L ++ G N ++F L G V+ Sbjct: 39 FDAVLLIVVQEAEVPVFVKHYTYNDKKAALHIVKESQLNEWILHGSNRKIFDWLYNGRVV 98 Query: 104 WDPKGILGEMRREIIQFQGPIKERILFM--EFSRFLHMYVKSKRYMEAGCTMDAYNCVLI 161 +D + ++ E+ +F P R L M EF++ + Y+ K + E +DAYN V+ Sbjct: 99 FDRNEYISNLKVELKEF--PFYGRKLKMGVEFAKLIRRYMDGKAFFENNHYLDAYNHVVH 156 Query: 162 ALYHWARIEVSEAGCFPDPAVWEQIKGLNSSVHKLYEELTVSTETLDQRVELILLACEFS 221 +L+H AR+ V E+G P+ VW Q+K + + KLYEEL +S E L++R+EL+ LA EF Sbjct: 157 SLHHLARLAVIESGFHPEVTVWHQVKQIEPEIFKLYEELVISEEPLEKRLELLFLASEFL 216 Query: 222 IMSKMSDCCTILLNILGSRKEPWSIKELLQHSGLSQLGAELPLVLRKLVSRSQIREIASW 281 I SK L +I+ S KE WS E++ H LS +L ++L L+ + I + Sbjct: 217 IHSKTKIGIQHLTDIM-SEKEDWSFNEMITHPELSAYSVDLSMLLEYLIDKHLIEAVEIV 275 Query: 282 AEDAGDGH 289 + G H Sbjct: 276 TKSPGLYH 283 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.135 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,653,261,927 Number of extensions: 62042619 Number of successful extensions: 138480 Number of sequences better than 1.0e-05: 25 Number of HSP's gapped: 138475 Number of HSP's successfully gapped: 25 Length of query: 295 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 161 Effective length of database: 1,798,280,193 Effective search space: 289523111073 Effective search space used: 289523111073 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 131 (55.1 bits)