BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0099.0006.p (251 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KCN2.1 B3KCN2_9BACI Oxidoreductase domain protein 308 3e-82 B1D826.1 B1D826_9BACL Oxidoreductase domain protein 294 5e-78 B7DVE0.1 B7DVE0_9BACL Oxidoreductase domain protein 275 4e-72 A7NPX4.1 A7NPX4_ROSCS Oxidoreductase domain protein 263 8e-69 A5UT11.1 A5UT11_ROSS1 Oxidoreductase domain protein 253 9e-66 >B3KCN2.1 B3KCN2_9BACI Oxidoreductase domain protein Length = 333 Score = 308 bits (789), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 148/207 (71%), Positives = 165/207 (79%) Query: 1 VHAWDYIKQVQEHEDTVIAAVWDEDPVRGQAAAGQLNVPFYASLADLLAEDDIDGVIVDA 60 VHAWDY KQ QEH D I AVWDE+P RG+ AA + V F+ SL D+L DDID VIVDA Sbjct: 12 VHAWDYTKQAQEHPDAQIVAVWDENPERGREAAEKQGVRFHESLDDMLQSDDIDAVIVDA 71 Query: 61 PTRMHTEVLTAAAKAGKHIFTEKVIAATLKEANAILSEVSKQGVTLTVSLPRLYDGYTLA 120 PT MH EV+ AA AGKHIFTEKVIAATL+E N I+ V + V TVSLPRL DGYTLA Sbjct: 72 PTSMHREVMLKAAAAGKHIFTEKVIAATLQEVNDIIKAVKENQVKFTVSLPRLNDGYTLA 131 Query: 121 IQEVLRQGLLGTVTYVRVRLSHDGAIAGWLPAHFYNLEDCQGGALIDLGCHPMYLTRLFL 180 I+EVL Q LLGTVT VRVRLSH+GA AGWLP HFY+LE+C+GGALIDLGCHPMYLTRLFL Sbjct: 132 IREVLEQELLGTVTLVRVRLSHNGATAGWLPEHFYSLEECRGGALIDLGCHPMYLTRLFL 191 Query: 181 GQAVTGVSASFGYVTGKEVEDNAVATL 207 G+ V A+FGY+TGKEVEDNAVATL Sbjct: 192 GEEAIDVQANFGYITGKEVEDNAVATL 218 >B1D826.1 B1D826_9BACL Oxidoreductase domain protein Length = 330 Score = 294 bits (753), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 139/207 (67%), Positives = 163/207 (78%) Query: 1 VHAWDYIKQVQEHEDTVIAAVWDEDPVRGQAAAGQLNVPFYASLADLLAEDDIDGVIVDA 60 VHAWDY ++ Q H DT I AVWDE P RG+ AA +L VPF+++L +LLA +DIDGVIVDA Sbjct: 12 VHAWDYTREAQAHPDTEIVAVWDEIPARGEEAASKLGVPFFSNLDELLAREDIDGVIVDA 71 Query: 61 PTRMHTEVLTAAAKAGKHIFTEKVIAATLKEANAILSEVSKQGVTLTVSLPRLYDGYTLA 120 P+ +H EV+ AA+AGKHIFTEKV+A T KE N IL+ V + GV LTVSLPRL D YT + Sbjct: 72 PSNIHREVMVKAAQAGKHIFTEKVLALTTKEVNEILAAVEEAGVKLTVSLPRLNDWYTPS 131 Query: 121 IQEVLRQGLLGTVTYVRVRLSHDGAIAGWLPAHFYNLEDCQGGALIDLGCHPMYLTRLFL 180 IQ VL G+LG VT RVRLSH+GAIA WLP HFY+LE C GGALIDLGCHPMYLTRLFL Sbjct: 132 IQNVLESGILGKVTLTRVRLSHNGAIANWLPEHFYSLEQCGGGALIDLGCHPMYLTRLFL 191 Query: 181 GQAVTGVSASFGYVTGKEVEDNAVATL 207 G+ V AS+GYVTGK+VEDNAV+ L Sbjct: 192 GEMPVQVQASYGYVTGKDVEDNAVSIL 218 >B7DVE0.1 B7DVE0_9BACL Oxidoreductase domain protein Length = 325 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 137/207 (66%), Positives = 158/207 (76%), Gaps = 1/207 (0%) Query: 1 VHAWDYIKQVQEHEDTVIAAVWDEDPVRGQAAAGQLNVPFYASLADLLAEDDIDGVIVDA 60 VHA DY +Q EH DT I AVWDE RG+A A +L+V FY S+ +LL+ +DIDGVIVD Sbjct: 7 VHARDYARQATEHPDTEIVAVWDEIVDRGKAEAERLSVSFYDSIDELLSLNDIDGVIVDV 66 Query: 61 PTRMHTEVLTAAAKAGKHIFTEKVIAATLKEANAILSEVSKQGVTLTVSLPRLYDGYTLA 120 PT MH EV+ AA A KHIFTEKV+A TL+EAN I+S V + V L VSLPR+ D YTLA Sbjct: 67 PTNMHGEVMIKAALAKKHIFTEKVLALTLREANQIVSSVKEANVKLIVSLPRINDSYTLA 126 Query: 121 IQEVLRQGLLGTVTYVRVRLSHDGAIAGWLPAHFYNLEDCQGGALIDLGCHPMYLTRLFL 180 IQE+L QGLLG +TY RVRL+H+GAIA WLP HFY+L C GGAL DLGCHPMYLTRLFL Sbjct: 127 IQEILSQGLLGDLTYARVRLAHNGAIANWLPEHFYSLSQCGGGALTDLGCHPMYLTRLFL 186 Query: 181 GQAVTGVSASFGYVTGKEVEDNAVATL 207 G +SAS+GYV GKEVEDNAVA L Sbjct: 187 GMP-ERISASYGYVLGKEVEDNAVAVL 212 >A7NPX4.1 A7NPX4_ROSCS Oxidoreductase domain protein Length = 332 Score = 263 bits (673), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 131/213 (61%), Positives = 154/213 (72%), Gaps = 7/213 (3%) Query: 1 VHAWDYIKQVQEHEDTVIAAVWDEDPVRGQAAAGQLNVPFYASLADLLAEDDIDGVIVDA 60 VHAWDY +Q Q H D I AVWDE P RG AAA +L VPFY SL +LLA +ID VIVDA Sbjct: 12 VHAWDYTRQAQSHPDVTIGAVWDELPARGAAAAEKLGVPFYESLDELLASPEIDAVIVDA 71 Query: 61 PTRMHTEVLTAAAKAGKHIFTEKVIAATLKEANAILSEVSKQGVTLTVSLPRLYDGYTLA 120 PT MH EV+ AAA+AGKHIFTEKV+A TL EAN I++ + V LTVSLPRL +GYT A Sbjct: 72 PTSMHCEVMVAAARAGKHIFTEKVLAPTLTEANQIVAAADQANVVLTVSLPRLSEGYTAA 131 Query: 121 IQEVLRQGLLGTVTYVRVRLSHDGAI------AGWLPAHFYNLEDCQGGALIDLGCHPMY 174 I ++ QG LG T VR RL+H+GA+ GWLP HFY+ + C+GGA+IDLGCHPMY Sbjct: 132 IASLIAQGALGEPTLVRTRLAHNGALRTEQNPNGWLPPHFYDPDQCRGGAMIDLGCHPMY 191 Query: 175 LTRLFLGQAVTGVSASFGYVTGKEVEDNAVATL 207 L FLG T V+A +GYVTG+ VEDNAV TL Sbjct: 192 LAHHFLGLPET-VNAHYGYVTGRAVEDNAVVTL 223 >A5UT11.1 A5UT11_ROSS1 Oxidoreductase domain protein Length = 332 Score = 253 bits (647), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 131/213 (61%), Positives = 156/213 (73%), Gaps = 7/213 (3%) Query: 1 VHAWDYIKQVQEHEDTVIAAVWDEDPVRGQAAAGQLNVPFYASLADLLAEDDIDGVIVDA 60 VHAWDY +Q Q H D I AVWDE P RG+AAA QL VPFY SL DLLA +ID VIVDA Sbjct: 12 VHAWDYTRQAQSHPDVTIGAVWDELPERGRAAAEQLGVPFYESLDDLLALPEIDAVIVDA 71 Query: 61 PTRMHTEVLTAAAKAGKHIFTEKVIAATLKEANAILSEVSKQGVTLTVSLPRLYDGYTLA 120 PT MH +V+ AAA+AGKHIFTEKV+A TL EAN I++ + V LTVSLPRL +GYT A Sbjct: 72 PTSMHCDVMVAAARAGKHIFTEKVLAPTLAEANEIIAAADQASVVLTVSLPRLAEGYTQA 131 Query: 121 IQEVLRQGLLGTVTYVRVRLSHDGAIA------GWLPAHFYNLEDCQGGALIDLGCHPMY 174 I ++ G G +T VR+R++H+GA+ GWLP HFY+ E C+GGA+IDLGCHPMY Sbjct: 132 ITSLITDGACGDLTLVRIRMAHNGALRTEQNPDGWLPPHFYDPEQCRGGAMIDLGCHPMY 191 Query: 175 LTRLFLGQAVTGVSASFGYVTGKEVEDNAVATL 207 L R FLG T V+A +GYVTG+ VEDNAV TL Sbjct: 192 LARHFLGLPET-VNAHYGYVTGRAVEDNAVVTL 223 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.134 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,353,849,482 Number of extensions: 50311657 Number of successful extensions: 136484 Number of sequences better than 1.0e-05: 2259 Number of HSP's gapped: 136331 Number of HSP's successfully gapped: 2259 Length of query: 251 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 119 Effective length of database: 1,817,122,223 Effective search space: 216237544537 Effective search space used: 216237544537 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)