BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0099.0001.p (244 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KCP4.1 B3KCP4_9BACI Putative uncharacterized protein 410 e-113 C0Z8Y8.1 Y1481_BREBN UPF0082 protein BBR47_14810 374 e-102 A7Z282.1 Y723_BACA2 UPF0082 protein RBAM_007230 373 e-102 O31509.3 YEEI_BACSU UPF0082 protein yeeI 373 e-101 B1DHW7.1 B1DHW7_9BACL Putative uncharacterized protein 372 e-101 >B3KCP4.1 B3KCP4_9BACI Putative uncharacterized protein Length = 239 Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/239 (82%), Positives = 217/239 (90%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKWNNIKEKKASKDANTS+VYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP Sbjct: 1 MGRKWNNIKEKKASKDANTSRVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 KAIIDRALDKAKGSGDENY ELRYEGFGP+GSMII+DALTNNVNRTAP VRSAF+KNGGN Sbjct: 61 KAIIDRALDKAKGSGDENYEELRYEGFGPNGSMIIVDALTNNVNRTAPAVRSAFNKNGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 MGVSGSV+YMF+PTAVIG+EGKTA+EVM+LL+ IVYAEPDQFHAV Sbjct: 121 MGVSGSVSYMFDPTAVIGVEGKTAEEVMDLLLEADLDVRDILEEEEAVIVYAEPDQFHAV 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVDSEE 244 QE F++AGITDFTVAELTML QN+V+LPE+ +AQFEKLIDALE+L+DVQQVYHNV+ EE Sbjct: 181 QEAFKAAGITDFTVAELTMLAQNFVSLPEEGQAQFEKLIDALEDLEDVQQVYHNVEFEE 239 >C0Z8Y8.1 Y1481_BREBN UPF0082 protein BBR47_14810 Length = 239 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/236 (75%), Positives = 205/236 (86%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKWNNIKEKKASKDA+TS++YA+FG EIYVAAK+GEPDPESNRALKVVLERAKTY+VP Sbjct: 1 MGRKWNNIKEKKASKDASTSRIYARFGKEIYVAAKQGEPDPESNRALKVVLERAKTYSVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 KAIIDRA+DKAKG DE + +LRYEGFGP+GSMII+DALTNNVNRTAP VR+AF+KNGGN Sbjct: 61 KAIIDRAIDKAKGGSDETFSDLRYEGFGPNGSMIIVDALTNNVNRTAPEVRAAFNKNGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 MGVSGSV YMF+PTAV GLEGK++DEV+E+L+ IVYA+ +QFHAV Sbjct: 121 MGVSGSVAYMFDPTAVFGLEGKSSDEVLEILMEADVDVRDILEEDGAVIVYADAEQFHAV 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVD 241 QE ++ G+++FTVAELTMLPQN VTL ED +AQFEKLIDALE+LDDVQQVYHNVD Sbjct: 181 QEALKNGGVSEFTVAELTMLPQNEVTLTEDVQAQFEKLIDALEDLDDVQQVYHNVD 236 >A7Z282.1 Y723_BACA2 UPF0082 protein RBAM_007230 Length = 239 Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/236 (76%), Positives = 204/236 (86%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKWNNIKEKKASKDANTS++YAKFG EIYVAAK+GEPDPESN+ALKVVLERAKTY+VP Sbjct: 1 MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVVLERAKTYSVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 K II+RA++KAKG +EN+ ELRYEGFGP+GSMII+DALTNNVNRTAP VR+AF KNGGN Sbjct: 61 KNIIERAIEKAKGGAEENFDELRYEGFGPNGSMIIVDALTNNVNRTAPEVRAAFGKNGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 MGVSGSV YMF+ TAVIG+EGKTADE +ELL+ IVYAEPDQFHAV Sbjct: 121 MGVSGSVAYMFDATAVIGVEGKTADEALELLMEADVDVRDILEEDDSVIVYAEPDQFHAV 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVD 241 QE F++AG+ +FTVAELTML QN V LPEDA+AQFEKLID LE+L+DVQQVYHNVD Sbjct: 181 QEAFKNAGVEEFTVAELTMLAQNEVELPEDAKAQFEKLIDVLEDLEDVQQVYHNVD 236 >O31509.3 YEEI_BACSU UPF0082 protein yeeI Length = 239 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/236 (75%), Positives = 205/236 (86%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKWNNIKEKKASKDANTS++YAKFG EIYVAAK+GEPDPESN+ALKVVLERAKTY+VP Sbjct: 1 MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVVLERAKTYSVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 K II+RA++KAKG +ENY ELRYEGFGP+GSMII+DALTNNVNRTAP VR+AF KNGGN Sbjct: 61 KNIIERAIEKAKGGAEENYDELRYEGFGPNGSMIIVDALTNNVNRTAPEVRAAFGKNGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 MGVSGSV YMF+ TAVIG+EGKTADE +E+L+ IVYAEPDQFHAV Sbjct: 121 MGVSGSVAYMFDATAVIGVEGKTADEALEILMEADVDVRDILEEDDSAIVYAEPDQFHAV 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVD 241 QE F++AG+ +FTVAELTML Q+ VTLP+DA+ QFEKLIDALE+L+DVQQVYHNVD Sbjct: 181 QEAFKNAGVEEFTVAELTMLAQSEVTLPDDAKEQFEKLIDALEDLEDVQQVYHNVD 236 >B1DHW7.1 B1DHW7_9BACL Putative uncharacterized protein Length = 238 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/238 (75%), Positives = 205/238 (86%) Query: 6 MGRKWNNIKEKKASKDANTSKVYAKFGVEIYVAAKKGEPDPESNRALKVVLERAKTYNVP 65 MGRKWNNIKEKKASKDANTS++YAKFG+EIYVAAKKGEP+PESN ALK VLERAKTYNVP Sbjct: 1 MGRKWNNIKEKKASKDANTSRIYAKFGLEIYVAAKKGEPNPESNGALKFVLERAKTYNVP 60 Query: 66 KAIIDRALDKAKGSGDENYVELRYEGFGPSGSMIIIDALTNNVNRTAPLVRSAFSKNGGN 125 KAIIDRA+DKAKG DE Y ELRYEGFGP+GSMII+DALTNNVNRTAP VRSAF+K GGN Sbjct: 61 KAIIDRAIDKAKGGSDEQYFELRYEGFGPAGSMIIVDALTNNVNRTAPEVRSAFNKAGGN 120 Query: 126 MGVSGSVTYMFEPTAVIGLEGKTADEVMELLIXXXXXXXXXXXXXXXXIVYAEPDQFHAV 185 MGVSGSV+YMF+ TAVIG+EGK+ D+VME+++ +VYA PDQF+AV Sbjct: 121 MGVSGSVSYMFDQTAVIGVEGKSLDDVMEIMLEADVDVNDIAEEDETIMVYAAPDQFNAV 180 Query: 186 QEVFRSAGITDFTVAELTMLPQNYVTLPEDAEAQFEKLIDALEELDDVQQVYHNVDSE 243 QE F++AGIT+F VAE+TML QN+VTLPEDA A FEKLIDALE+L+DVQQVYHNV+ E Sbjct: 181 QEAFKTAGITEFVVAEVTMLAQNFVTLPEDAVASFEKLIDALEDLEDVQQVYHNVEFE 238 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.131 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,357,501,182 Number of extensions: 53248599 Number of successful extensions: 118321 Number of sequences better than 1.0e-05: 1911 Number of HSP's gapped: 115314 Number of HSP's successfully gapped: 1911 Length of query: 244 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 112 Effective length of database: 1,817,122,223 Effective search space: 203517688976 Effective search space used: 203517688976 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 129 (54.3 bits)