BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0001.p (633 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1PV58.1 C1PV58_ALIAC Putative Ser protein kinase 930 0.0 B7DQG8.1 B7DQG8_9BACL Putative serine protein kinase, PrkA 929 0.0 P39134.1 PRKA_BACSU Protein prkA 907 0.0 C2W3U9.1 C2W3U9_BACCE Putative uncharacterized protein 904 0.0 B0TDS1.1 B0TDS1_HELMI Serine protein kinase, putative 903 0.0 >C1PV58.1 C1PV58_ALIAC Putative Ser protein kinase Length = 632 Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/633 (69%), Positives = 527/633 (83%), Gaps = 1/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M+FLE+L +YR +E L W GTF DYL LVR+NP IA TAH +Y MI +AGV DG+ Sbjct: 1 MSFLERLSSYRAEEEALRWRGTFADYLELVRQNPNIARTAHARIYDMIVAAGVETDADGK 60 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 YKFF +FGL D I+ LVEEYF AA+RLDVRKR+LLLMGPVSGGKST+VTL+K GL Sbjct: 61 PHYKFFEKEIFGLSDTIERLVEEYFHAAARRLDVRKRILLLMGPVSGGKSTIVTLLKRGL 120 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RTPEGA YAI GCPM EEPLHLIP ELR +F E+GV IEG LCP CR+R+++E G Sbjct: 121 EQYSRTPEGALYAIAGCPMHEEPLHLIPNELRPDFEAEFGVKIEGNLCPSCRLRVDEEFG 180 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++PV R++ SE R GIGTF+PSDPKSQDIADLTGS+DFSTIT+YGSESDPRAYRF Sbjct: 181 GRIEDVPVERIVLSEERRVGIGTFSPSDPKSQDIADLTGSVDFSTITEYGSESDPRAYRF 240 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRGLMEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADE+IIAHTNE EY Sbjct: 241 DGELNKANRGLMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADEMIIAHTNEAEY 300 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FI+NKKNEAL SRMIVM IPYNL+ E +IY KLV S L N VH+AP+AL TA++F Sbjct: 301 RSFIANKKNEALQSRMIVMPIPYNLRVDDEVKIYEKLVQQSDLKN-VHIAPHALRTAAIF 359 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 ++L+RLKE K+ +DL+KK+YLY L+ E P EGMSG+DPRY+INRI Sbjct: 360 SILTRLKESKKQGVDLMKKLYLYNGQAVEGLKDSDVKELKAEFPDEGMSGLDPRYIINRI 419 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 S+ALIR + CINALDVLR++K+GLDQH SI+ E+RERL+N + +AR+EYD AKTEVQ+ Sbjct: 420 STALIRRDTQCINALDVLRAIKDGLDQHPSITPEDRERLLNFVAMARREYDEMAKTEVQK 479 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+SFEESA+T+L NYLDNVEAYC+ K++DP+T EE DPDEKLMRSIEEQIGI+EN K Sbjct: 480 AFVYSFEESAKTLLENYLDNVEAYCNWQKIKDPLTGEEMDPDEKLMRSIEEQIGISENAK 539 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 RAFREEILI+IST+ARRG++F+Y SHE LK+AIEKKLFADLKDV+KITTSS PDE QLK Sbjct: 540 RAFREEILIRISTYARRGKKFDYHSHERLKEAIEKKLFADLKDVVKITTSSKTPDEQQLK 599 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++NEV+RRLI+ +GYC CANEL++Y G LLNR Sbjct: 600 KINEVTRRLIDEHGYCPVCANELLRYTGSLLNR 632 >B7DQG8.1 B7DQG8_9BACL Putative serine protein kinase, PrkA Length = 632 Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/633 (69%), Positives = 527/633 (83%), Gaps = 1/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M+FLE+L +YR +E L W GTF DYL LVR+NP IA TAH +Y MI +AGV DG+ Sbjct: 1 MSFLERLSSYRAEEEALRWRGTFADYLELVRQNPNIARTAHARIYDMIVAAGVETDADGK 60 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 YKFF +FGL D I+ LVEEYF AA+RLDVRKR+LLLMGPVSGGKST+VTL+K GL Sbjct: 61 PHYKFFEKEIFGLSDTIERLVEEYFHAAARRLDVRKRILLLMGPVSGGKSTIVTLLKRGL 120 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RTPEGA YAI GCPM EEPLHLIP ELR +F E+GV IEG LCP CR+R+++E G Sbjct: 121 EQYSRTPEGALYAIAGCPMHEEPLHLIPNELRPDFEAEFGVKIEGNLCPSCRLRVDEEFG 180 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++PV R++ SE R GIGTF+PSDPKSQDIADLTGS+DFSTIT+YGSESDPRAYRF Sbjct: 181 GRIEDVPVERIVLSEERRVGIGTFSPSDPKSQDIADLTGSVDFSTITEYGSESDPRAYRF 240 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRGLMEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADE+IIAHTNE EY Sbjct: 241 DGELNKANRGLMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADEMIIAHTNEAEY 300 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FI+NKKNEAL SRMIVM IPYNL+ E +IY KLV S L N VH+AP+AL TA++F Sbjct: 301 RSFIANKKNEALQSRMIVMPIPYNLRVDDEVKIYEKLVQQSDLKN-VHIAPHALRTAAIF 359 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 ++L+RLKE K+ +DL+KK+YLY L+ E P EGMSG+DPRY+INRI Sbjct: 360 SILTRLKESKKQGVDLMKKLYLYNGQAVEGLKDSDVKELKAEFPDEGMSGLDPRYIINRI 419 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 S+ALIR + CINALDVLR++K+GLDQH SI+ E+RERL+N + +AR+EYD AKTEVQ+ Sbjct: 420 STALIRRDTQCINALDVLRAIKDGLDQHPSITPEDRERLLNFVAMARREYDEMAKTEVQK 479 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+SFEESA+T+L NYLDNVEAYC+ K++DP+T EE DPDEKLMRSIEEQIGI+EN K Sbjct: 480 AFVYSFEESAKTLLENYLDNVEAYCNWQKIKDPLTGEEMDPDEKLMRSIEEQIGISENAK 539 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 RAFREEILI+IST+ARRG++F+Y SH+ LK+AIEKKLFADLKDV+KITTSS PDE QLK Sbjct: 540 RAFREEILIRISTYARRGKKFDYHSHDRLKEAIEKKLFADLKDVVKITTSSKTPDEQQLK 599 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++NEV+RRLI+ +GYC CANEL++Y G LLNR Sbjct: 600 KINEVTRRLIDEHGYCPVCANELLRYTGSLLNR 632 >P39134.1 PRKA_BACSU Protein prkA Length = 631 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/633 (67%), Positives = 530/633 (83%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ YR++E L WEGTF DYL +++ENP +A +AH V+ MI+ +G+ ++ DGR Sbjct: 1 MDILKKIEKYREEEQRLKWEGTFADYLEIIKENPMVAQSAHSRVFNMIKDSGIEEI-DGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 ++Y FF LFGLE++++ LVEEYF PAA+RLDVRKR+LLLMGPVSGGKSTLVT++K GL Sbjct: 60 KKYSFFDRELFGLEESLERLVEEYFHPAAKRLDVRKRILLLMGPVSGGKSTLVTMLKKGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 EA+T T GA YAIKGCPM E+PLHLIP LR++F REYG+ IEG L P+ MRLE+E+G Sbjct: 120 EAYTLTDNGAVYAIKGCPMHEDPLHLIPHHLRDDFYREYGIRIEGSLSPLNVMRLEEEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++ V R+ FSE +RTGIGTF+PSDPKSQDIADLTGSIDFSTI +YGSESDPRAYRF Sbjct: 180 GRIEDVKVERIFFSEDKRTGIGTFSPSDPKSQDIADLTGSIDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADELI+AHTNETEY Sbjct: 240 DGELNKANRGMMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNETEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FISNKKNEALHSR+IVM +PYNL+ +EERIY K++ S + + VH+AP+ L A++F Sbjct: 300 RSFISNKKNEALHSRIIVMPVPYNLKVSEEERIYEKMIAESDVAD-VHIAPHTLKVAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 ++L+RLKEPKR +IDL+KKM LY +++E+ EGMSG+DPRYVINRI Sbjct: 359 SILTRLKEPKRSDIDLVKKMRLYDGESVEGYNSVDVEDMKKEYNDEGMSGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SS +IR N IN+LDVLRSLKEGLDQH SIS E+RER +N I+ ARKEYD AK EVQ+ Sbjct: 419 SSTIIRKNMESINSLDVLRSLKEGLDQHPSISSEDRERYLNFISAARKEYDDIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE +PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKNKLRDPLTGEEMNPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKDV+KITTS+ PDE QLK Sbjct: 539 KAFREEILIRISAYARKGKRFDYNSHERLREAIQKKLFADLKDVVKITTSTKTPDEQQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++NEV RLI+ +GY +T ANEL+KYVG LLNR Sbjct: 599 KVNEVVARLIDEHGYNSTSANELLKYVGSLLNR 631 >C2W3U9.1 C2W3U9_BACCE Putative uncharacterized protein Length = 631 Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/633 (68%), Positives = 528/633 (83%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ +R+ E L WEGTF +YL LV+E P +A TAH +Y MI+ AG+ ++ +GR Sbjct: 1 MDILKKIEQHREAEERLQWEGTFAEYLELVKERPWVAQTAHSRIYNMIKDAGIEEV-EGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 R+Y FFS LFGLEDA++ LVEEYF P+A+RLDVRKR+LLLMGPVSGGKSTLVT++K GL Sbjct: 60 RKYNFFSNQLFGLEDALERLVEEYFHPSAKRLDVRKRILLLMGPVSGGKSTLVTMLKRGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RT GA +AIKGCPM E+PLHLIP LR++F EYGV IEG L P+ MRLE+E+G Sbjct: 120 ETYSRTDRGAVFAIKGCPMHEDPLHLIPHHLRDDFYDEYGVRIEGNLSPLNVMRLEKEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++ V R+ FSE RTGIGTF+PSDPKSQDIADLTGSIDFSTI +YGSESDPRAYRF Sbjct: 180 GRIEDVVVERIFFSEDRRTGIGTFSPSDPKSQDIADLTGSIDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADELI+AHTNETEY Sbjct: 240 DGELNKANRGMMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNETEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FISNKKNEALHSR+IVM +PYNL+A +EE IY K++ S + N VH+AP+ L A++F Sbjct: 300 RSFISNKKNEALHSRIIVMPVPYNLRASEEEHIYEKMIYESDVAN-VHIAPHTLRVAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 T+L+RLK+PKRP+IDLIKKM LY L+RE+ EGMSG+DPRYVINRI Sbjct: 359 TILTRLKDPKRPDIDLIKKMRLYDGEMVEGYNAIDVEDLQREYQDEGMSGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SS +IR INALDVLRSLK+GLDQH SIS E+RER MN I+LARKEYD AK EVQ+ Sbjct: 419 SSTIIRKEVPSINALDVLRSLKDGLDQHPSISNEDRERYMNFISLARKEYDDIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKSKLRDPLTGEEMSPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKDV+KITTS+ PDENQLK Sbjct: 539 KAFREEILIRISAYARKGKRFDYNSHERLREAIQKKLFADLKDVVKITTSTKTPDENQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++N+V RLI+ +GY ++ ANEL++YVG LLNR Sbjct: 599 KINDVVARLIDEHGYNSSSANELLRYVGSLLNR 631 >B0TDS1.1 B0TDS1_HELMI Serine protein kinase, putative Length = 631 Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/633 (69%), Positives = 521/633 (82%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M FL+KL YR +E +L WEGTF DYL LV+E P I AH +Y MI S GV ++ +G Sbjct: 1 MEFLDKLENYRQRERELAWEGTFRDYLHLVKERPFITQLAHSRIYNMIVSEGVEEI-NGI 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 R YKFFS LFG++ ++ LVEEYF AA+R +VRKR+LLLMGPVSGGKST+V ++K GL Sbjct: 60 RRYKFFSHELFGMDKTLETLVEEYFHSAARRTEVRKRILLLMGPVSGGKSTIVMMLKRGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E F+RT GA YAIKGCPM EEPLHLIP+ELRE+F+REY V+IEG LCP CRMRLE E Sbjct: 120 ERFSRTELGALYAIKGCPMHEEPLHLIPKELREDFQREYNVYIEGSLCPHCRMRLETEWK 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++PV R+ FSE R G+GTF+PSDPKSQDIADLTGSIDFSTI++YGSESDPRAYRF Sbjct: 180 GRIEDVPVERIFFSEENRVGVGTFSPSDPKSQDIADLTGSIDFSTISEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LK DEKFLWNLLSL+QEGNFKAGRFALISADELI AHTNE+EY Sbjct: 240 DGELNKANRGMMEFQEMLKADEKFLWNLLSLSQEGNFKAGRFALISADELICAHTNESEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 +AF+SNKKNEAL SRMIV+R+PYNL+ E RIY KL+ S L + +H+AP+AL A++F Sbjct: 300 KAFVSNKKNEALISRMIVVRVPYNLKVSDEVRIYEKLISQSDLRH-IHIAPHALRAAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 +VLSRLKE K+ +DL+KKM LY L+ E EGMSG DPRYVINR+ Sbjct: 359 SVLSRLKESKKQGMDLVKKMRLYDGEDVEGFKQKDLVELQNEALDEGMSGADPRYVINRL 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SSALIR + CINALDVLR++K+GLDQH SISKEER+RL+N I +ARKE+D AK EVQ+ Sbjct: 419 SSALIRKDTVCINALDVLRAIKDGLDQHPSISKEERDRLLNYIAIARKEFDDIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+++EESART+LNNYLDNVE+YC+G K++DPIT EE DPDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYAYEESARTMLNNYLDNVESYCNGTKLQDPITDEEMDPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI++ST+AR+G+ F+YTSHE LK+AIEKKLFADLKDV+KITTSS P+ QLK Sbjct: 539 KAFREEILIRLSTYARKGKSFDYTSHERLKEAIEKKLFADLKDVVKITTSSRTPNAEQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 RMNEV+ RLIE +GYC CANEL++Y G LLNR Sbjct: 599 RMNEVTARLIEDHGYCHVCANELLRYTGSLLNR 631 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,544,794,002 Number of extensions: 144830656 Number of successful extensions: 425397 Number of sequences better than 1.0e-05: 526 Number of HSP's gapped: 422590 Number of HSP's successfully gapped: 527 Length of query: 633 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 491 Effective length of database: 1,722,912,073 Effective search space: 845949827843 Effective search space used: 845949827843 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)