BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0087.0011.p
         (122 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0GF60.1 C0GF60_9FIRM Abi family protein                               94   4e-18
A5ZP46.1 A5ZP46_9FIRM Putative uncharacterized protein                 85   2e-15
A3QSC6.1 A3QSC6_9CAUD Putative abortive infection bacteriophage ...    84   4e-15
B9MNK8.1 B9MNK8_ANATD Putative uncharacterized protein                 81   4e-14
B7ATK8.1 B7ATK8_9BACE Putative uncharacterized protein                 77   4e-13

>C0GF60.1 C0GF60_9FIRM Abi family protein
          Length = 292

 Score = 94.0 bits (232), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 65/99 (65%)

Query: 23  ARFIASWLHAISNLRNICAHYGRIYNRNFPIAPKLFARDKKGIIDNNKVYAIVYNMKYLI 82
             ++ SWL+A+S  RNICAHYGR+Y+R   I PKLF  D K  I N+ V+++++    L+
Sbjct: 192 GEYVKSWLYALSVFRNICAHYGRLYDRRLKITPKLFRGDMKKGIKNDTVFSVLFITGRLL 251

Query: 83  SDKKYWNSWVERLRSLIDEYSEVDLRLIGFHQNWYNLIK 121
            +K  W ++V  L +LI+   +VDL+L+GF  NW  +++
Sbjct: 252 RNKSEWKNFVTNLTALIENTEQVDLKLMGFPDNWEEVLR 290


>A5ZP46.1 A5ZP46_9FIRM Putative uncharacterized protein
          Length = 293

 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 62/97 (63%)

Query: 25  FIASWLHAISNLRNICAHYGRIYNRNFPIAPKLFARDKKGIIDNNKVYAIVYNMKYLISD 84
           ++ SWL +IS +RNICAHYGR+YN      P L+    +  I NN++  ++  +K+++ +
Sbjct: 194 YLESWLESISYVRNICAHYGRLYNAKLSKTPMLYKEYSEAGIGNNRILGVLLCLKHILKN 253

Query: 85  KKYWNSWVERLRSLIDEYSEVDLRLIGFHQNWYNLIK 121
             +WN +V+++  L D+Y  VD+  +GF +NW  L++
Sbjct: 254 DNHWNMFVDKIEILFDKYENVDITTMGFKENWKALLE 290


>A3QSC6.1 A3QSC6_9CAUD Putative abortive infection bacteriophage resistance
           protein ORF 37
          Length = 287

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 2/99 (2%)

Query: 25  FIASWLHAISNLRNICAHYGRIYNRNFPIAPKLFARDKKGIIDNNKVYAIVYNMKYLISD 84
            + SWL +++ +RN CAHYGRIYN NF I   +    KK  +DN K+++ +  MK+L  D
Sbjct: 190 LVKSWLQSLTQVRNQCAHYGRIYNNNFRIIT-IKNEYKKYNLDNKKIFSYILAMKHLTMD 248

Query: 85  KKYWNSWVERLRSLIDEY-SEVDLRLIGFHQNWYNLIKK 122
           K  WNS+  +L+ LI++Y + +DL+LIGF  NW  ++ K
Sbjct: 249 KLIWNSFFIKLQKLINDYNNSIDLKLIGFPNNWIEILAK 287


>B9MNK8.1 B9MNK8_ANATD Putative uncharacterized protein
          Length = 148

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 66/104 (63%), Gaps = 3/104 (2%)

Query: 20  GQFARFIASWLHAISNLRNICAHYGRIYNRNFPIAPKLFARDKKGIIDNNKVYAIVYNMK 79
           G  + ++ SWL ++  +RN+CAHY R+Y R F   PKL  + +  + +NN ++AI + M+
Sbjct: 43  GFPSEYLKSWLKSLVLVRNLCAHYRRLYRRTFAFPPKLSKKQRMYVENNNSLFAICFVMR 102

Query: 80  YLISDKKYWNSWVERLRSLIDEY--SEVDLRLIGFHQNWYNLIK 121
           Y++ +   WN++V  L +L +EY   +VD+ LIGF  NW  +++
Sbjct: 103 YML-ESSSWNNFVINLEALFEEYKGKKVDISLIGFPINWLQILR 145


>B7ATK8.1 B7ATK8_9BACE Putative uncharacterized protein
          Length = 294

 Score = 77.4 bits (189), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 58/96 (60%)

Query: 25  FIASWLHAISNLRNICAHYGRIYNRNFPIAPKLFARDKKGIIDNNKVYAIVYNMKYLISD 84
           +  SWL +I+ +RNICAHYGR+YN      P L+    +  I NN++Y ++  +K+L+  
Sbjct: 194 YFESWLESIAYVRNICAHYGRLYNAKLTKTPILYKEYTQSGISNNRIYGVLLCLKHLLIT 253

Query: 85  KKYWNSWVERLRSLIDEYSEVDLRLIGFHQNWYNLI 120
             +W ++V+ +  L D+Y  V++  +GF  NW  L+
Sbjct: 254 DAHWKAFVDDIELLFDKYECVNIVTMGFPDNWKRLL 289


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.327    0.141    0.473 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 792,218,355
Number of extensions: 30725424
Number of successful extensions: 90807
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 90796
Number of HSP's successfully gapped: 49
Length of query: 122
Length of database: 3,060,696,203
Length adjustment: 88
Effective length of query: 34
Effective length of database: 2,231,646,883
Effective search space: 75875994022
Effective search space used: 75875994022
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 125 (52.8 bits)