BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0083.0001.p (222 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A3IAK1.1 A3IAK1_9BACI Putative uncharacterized protein 244 5e-63 B1HNF3.1 B1HNF3_LYSSC Putative uncharacterized protein 242 2e-62 Q2BBF7.1 Q2BBF7_9BACI Putative uncharacterized protein 241 2e-62 A6CNL9.1 A6CNL9_9BACI Putative uncharacterized protein 240 8e-62 Q02Y81.1 Q02Y81_LACLS Peptidase E 57 2e-06 >A3IAK1.1 A3IAK1_9BACI Putative uncharacterized protein Length = 223 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 121/220 (55%), Positives = 160/220 (72%), Gaps = 6/220 (2%) Query: 4 HYYFSWFNDFLPERLVQCLHEDIQDRQSLVMISAQPSDYESEQINFDDISEWTWLNQANL 63 HYY WFNDF PE L + L EDI DR+SL MIS+ P YE E +E +WL+QA + Sbjct: 9 HYYLGWFNDFFPENLGRVLQEDITDRKSLAMISSNPLLYEEE-----GATERSWLDQAGI 63 Query: 64 IFDEYHFIDYRMQKEEAQRFLQNASVIFLCGGDPVQQNDFLAEYELSDVMKNSDAVIMGA 123 +FD+YH I+Y +QKE+AQ F++NAS IFL GGD ++QN+FL +YELSD++K S AV+MGA Sbjct: 64 LFDDYHLINYHVQKEDAQAFIRNASAIFLLGGDTLKQNEFLLDYELSDLIKKSTAVVMGA 123 Query: 124 SAGALNMAAQWLRLINTGYEVETSIIYDGIGFDHFAYESH-SKRDYATFVQGYLFPLSEK 182 SAGA+NM+A+WL N GY VE S +YDGIG D+F+ SH + VQ L LSE+ Sbjct: 124 SAGAINMSAKWLCSKNFGYPVENSALYDGIGLDNFSVLSHFDLENNMELVQDELSALSEE 183 Query: 183 IDVYAAEQESAMRVKDGKIEIMGPVYLISRSKIQKLVETL 222 I++YA+ ++ A+RVK G I+I+G VYL+S +KIQKL ETL Sbjct: 184 INIYASNKDCAVRVKGGNIDILGNVYLMSHTKIQKLDETL 223 >B1HNF3.1 B1HNF3_LYSSC Putative uncharacterized protein Length = 223 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 120/221 (54%), Positives = 161/221 (72%), Gaps = 6/221 (2%) Query: 3 THYYFSWFNDFLPERLVQCLHEDIQDRQSLVMISAQPSDYESEQINFDDISEWTWLNQAN 62 THYY WFNDF PE L + L EDI DR+SL MIS+ P YE +E +WL+QA Sbjct: 8 THYYLGWFNDFFPENLGRVLQEDITDRKSLAMISSNPLLYEEAGA-----TERSWLDQAG 62 Query: 63 LIFDEYHFIDYRMQKEEAQRFLQNASVIFLCGGDPVQQNDFLAEYELSDVMKNSDAVIMG 122 ++FD+YH I+Y +QKE+AQ F++NAS IFL GGD ++QN+FL +YELSD++K S AV+MG Sbjct: 63 ILFDDYHLINYHVQKEDAQTFIRNASAIFLLGGDTLKQNEFLLDYELSDLIKKSTAVVMG 122 Query: 123 ASAGALNMAAQWLRLINTGYEVETSIIYDGIGFDHFAYESH-SKRDYATFVQGYLFPLSE 181 ASAGA+NM+A+WL N GY VE S +YDGIG D+F+ SH + VQ L PLSE Sbjct: 123 ASAGAINMSAKWLCSKNFGYPVEKSSLYDGIGLDNFSVLSHFDLENNIELVQDELSPLSE 182 Query: 182 KIDVYAAEQESAMRVKDGKIEIMGPVYLISRSKIQKLVETL 222 ++++YA+ ++ A+RVK I+I+G VY+IS+SKI+KL ETL Sbjct: 183 ELNIYASNKDCAVRVKGDSIDILGNVYVISQSKIKKLDETL 223 >Q2BBF7.1 Q2BBF7_9BACI Putative uncharacterized protein Length = 218 Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/221 (54%), Positives = 156/221 (70%), Gaps = 6/221 (2%) Query: 3 THYYFSWFNDFLPERLVQCLHEDIQDRQSLVMISAQPSDYESEQINFDDISEWTWLNQAN 62 THYY WFN PE+L + L EDI DR+SLVMIS+ PS YE +E +WL+QA Sbjct: 3 THYYLGWFNKHFPEKLSKLLQEDIIDRKSLVMISSSPSIYEEM-----GAAERSWLDQAG 57 Query: 63 LIFDEYHFIDYRMQKEEAQRFLQNASVIFLCGGDPVQQNDFLAEYELSDVMKNSDAVIMG 122 ++FDEYH I+YR+ K+EA + NASVIFL GG+ V+QN FLA YELSD + S A +MG Sbjct: 58 IVFDEYHLINYRVPKKEAHTLISNASVIFLLGGNTVEQNKFLAGYELSDPITKSRATVMG 117 Query: 123 ASAGALNMAAQWLRLINTGYEVETSIIYDGIGFDHFAYESHSKRDY-ATFVQGYLFPLSE 181 ASAGA+NM+A+WL N GY VE S +YDGIG FA SH ++ VQ L PLSE Sbjct: 118 ASAGAINMSAKWLCSKNLGYNVEVSTLYDGIGLGDFAVLSHFDLEHNLALVQNELSPLSE 177 Query: 182 KIDVYAAEQESAMRVKDGKIEIMGPVYLISRSKIQKLVETL 222 ++++YA+ ++ A+RVK KI+I+G VYLISRSKI++L ETL Sbjct: 178 EMNIYASNKDCAVRVKGDKIDILGTVYLISRSKIERLDETL 218 >A6CNL9.1 A6CNL9_9BACI Putative uncharacterized protein Length = 222 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 120/221 (54%), Positives = 160/221 (72%), Gaps = 6/221 (2%) Query: 3 THYYFSWFNDFLPERLVQCLHEDIQDRQSLVMISAQPSDYESEQINFDDISEWTWLNQAN 62 THYY WFN+F PE L + L DI DR+SL MIS+ PS YE+ + +E +WL+QA Sbjct: 7 THYYLGWFNNFFPENLARMLQGDITDRKSLAMISSNPSIYEN-----NGATERSWLDQAG 61 Query: 63 LIFDEYHFIDYRMQKEEAQRFLQNASVIFLCGGDPVQQNDFLAEYELSDVMKNSDAVIMG 122 ++FDEYH I+YR+QKEE+Q +QNASVIFL GGD ++ N FL EY LSD++K S AV+MG Sbjct: 62 IMFDEYHLINYRVQKEESQTIIQNASVIFLLGGDILKLNSFLKEYGLSDLIKKSSAVVMG 121 Query: 123 ASAGALNMAAQWLRLINTGYEVETSIIYDGIGFDHFAYESH-SKRDYATFVQGYLFPLSE 181 ASAGA+NM+A+WL + G EVE + +Y+GIG D+F+ SH + VQ L LSE Sbjct: 122 ASAGAINMSAKWLCSKSFGDEVEMNSVYEGIGLDNFSVLSHFDLENNMALVQSELSFLSE 181 Query: 182 KIDVYAAEQESAMRVKDGKIEIMGPVYLISRSKIQKLVETL 222 +ID+YA+ ++ A+RVK KI+++G VYL+S SKIQKL ETL Sbjct: 182 EIDIYASNKDCALRVKGDKIDVIGNVYLLSHSKIQKLEETL 222 >Q02Y81.1 Q02Y81_LACLS Peptidase E Length = 231 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 3/117 (2%) Query: 17 RLVQCLHEDIQDRQSLVMISAQPSDYESEQINFDDISEWTWLNQANLIFDEYHFIDYRMQ 76 + ++ L E+I ++ + + P YE F + +L+ + F EY +D R Sbjct: 22 KFIENLSENIPTLAKVLFVCSDPYSYELTD-KFSEEMRICFLS-SGFNFSEYKVLDNR-N 78 Query: 77 KEEAQRFLQNASVIFLCGGDPVQQNDFLAEYELSDVMKNSDAVIMGASAGALNMAAQ 133 +E + A V+ L GG QN F E +L +KNSD VI+G SAG++N A + Sbjct: 79 IQEKHNIISEADVLILAGGHVPTQNQFFHEIDLKSELKNSDKVIIGFSAGSMNCAEE 135 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,296,915,417 Number of extensions: 49361973 Number of successful extensions: 119133 Number of sequences better than 1.0e-05: 7 Number of HSP's gapped: 119128 Number of HSP's successfully gapped: 7 Length of query: 222 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 91 Effective length of database: 1,826,543,238 Effective search space: 166215434658 Effective search space used: 166215434658 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)