BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0081.0019.p (203 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D679.1 B1D679_9BACL Putative uncharacterized protein 203 7e-51 B2V2M7.1 B2V2M7_CLOBA Putative uncharacterized protein 186 1e-45 B9E5Z9.1 B9E5Z9_CLOK1 Putative uncharacterized protein 184 3e-45 A5N2A4.1 A5N2A4_CLOK5 Phage-related protein 184 3e-45 A6LU02.1 A6LU02_CLOB8 Phage-like element pbsx protein XkdT 177 6e-43 >B1D679.1 B1D679_9BACL Putative uncharacterized protein Length = 207 Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 98/203 (48%), Positives = 134/203 (66%) Query: 1 MTYGENLYGTISYSSSPATQDGPEFSKPDLMKYLPEYYQGVLEMEQIQDSHAAECGQLAY 60 M YG +YG ++Y + S DL+ YLP YY+ + EM+++Q++ E +LA Sbjct: 1 MAYGNEVYGALAYGAEEGEDGNSNPSGIDLLAYLPSYYREITEMKELQEAAGYEISELAE 60 Query: 61 SIEDSALQTNVESATWGLARWEKVLALTTDNTKSYAARREMIKAKLRGSGTTTPEMIRRT 120 D Q+ +++ATWGL RWE L + + +SY RRE +KAKL GSGTTT +MI T Sbjct: 61 ESNDLLDQSFIDTATWGLTRWESELGIAANRAQSYERRREQLKAKLYGSGTTTKQMIIDT 120 Query: 121 ASAFSGGDVQVVEVPGAYSFEVRFVGTLGIPENMAGLIQIIEEIKPAHLDYKFVYSYTWW 180 A+AFSGG+V V P Y FE+ FVG+ GIP NM G IQ++E+IKPAHL Y F Y YT W Sbjct: 121 AAAFSGGEVAVNVYPEQYLFEIVFVGSKGIPPNMPGFIQMLEDIKPAHLAYSFKYIYTVW 180 Query: 181 NSLKSLTWNAAHARTWNELRVYE 203 ++L +L+W AHA+TW+EL+VYE Sbjct: 181 DNLAALSWGDAHAKTWSELKVYE 203 >B2V2M7.1 B2V2M7_CLOBA Putative uncharacterized protein Length = 204 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 92/203 (45%), Positives = 125/203 (61%), Gaps = 2/203 (0%) Query: 3 YGENLYGTISYSSSPATQDGPEFSKPDLMKYLPEYYQGVLEMEQIQDSHAAECGQLAYSI 62 YG N YGTI Y+ ++ + +L KY+P + + EM+ I + E G Y + Sbjct: 2 YGLNNYGTIKYAEKKLNEEDIKKYFLNLSKYVPSFISDIKEMKTIYNVQGTELGGFLYYL 61 Query: 63 EDSALQTNVESATWGLARWEKVLALTTDNTKSYAARREMIKAKLRGSGTTTPEMIRRTAS 122 +D Q +E+ATWGL WE + T+ SY RRE+IKAK RGSGTTT EMI+ A Sbjct: 62 KDLIDQAFIETATWGLIYWENEYGIETNLNSSYEDRREIIKAKKRGSGTTTKEMIKNVAE 121 Query: 123 AFSGGDVQVVEVPGAYSFEVRFVGTLGIPENMAGLIQIIEEIKPAHLDYKFVYSYTWWNS 182 FSGG+V V+E YSF V+FVG GIP+NM G ++E+IKPAHL Y F Y++T W+ Sbjct: 122 TFSGGEVNVIEDNKNYSFIVQFVGVKGIPKNMQGFKNMLEDIKPAHLSYSFKYTFTIWDF 181 Query: 183 L--KSLTWNAAHARTWNELRVYE 203 + K L WN+ ++WNEL+VYE Sbjct: 182 IKEKDLKWNSIENKSWNELKVYE 204 >B9E5Z9.1 B9E5Z9_CLOK1 Putative uncharacterized protein Length = 206 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 97/204 (47%), Positives = 128/204 (62%), Gaps = 3/204 (1%) Query: 3 YGENLYGTISYSSSPATQDGPEFS-KPDLMKYLPEYYQGVLEMEQIQDSHAAECGQLAYS 61 YG YGT YS D S KPDL+ LP + + + E + D + E G A+ Sbjct: 2 YGTEKYGTTGYSQEQQISDEEIKSYKPDLLYRLPPHLKEIPEFKSWGDVSSYELGLSAWQ 61 Query: 62 IEDSALQTNVESATWGLARWEKVLALTTDNTKSYAARREMIKAKLRGSGTTTPEMIRRTA 121 ED Q +++ATWGL WE + ++ TD KSY RR +IKAKLRGSGTTT +MI+ TA Sbjct: 62 EEDILNQCFIDTATWGLVFWESIFSIPTDLNKSYEDRRAVIKAKLRGSGTTTRQMIKNTA 121 Query: 122 SAFSGGDVQVVEVPGAYSFEVRFVGTLGIPENMAGLIQIIEEIKPAHLDYKFVYSYTWWN 181 AFSGG+ V+ P YSF V+F+G GIP+N+ Q++E+IKPAHL Y Y+YT WN Sbjct: 122 EAFSGGECDVIMHPEDYSFTVQFIGIKGIPKNLEDFKQMLEDIKPAHLGYYLKYTYTVWN 181 Query: 182 SL--KSLTWNAAHARTWNELRVYE 203 L K+LTWN A +TWN+L+VY+ Sbjct: 182 FLKDKNLTWNQAKPKTWNDLKVYD 205 >A5N2A4.1 A5N2A4_CLOK5 Phage-related protein Length = 206 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 97/204 (47%), Positives = 128/204 (62%), Gaps = 3/204 (1%) Query: 3 YGENLYGTISYSSSPATQDGPEFS-KPDLMKYLPEYYQGVLEMEQIQDSHAAECGQLAYS 61 YG YGT YS D S KPDL+ LP + + + E + D + E G A+ Sbjct: 2 YGTEKYGTTGYSQEQQISDEEIKSYKPDLLYRLPPHLKEIPEFKSWGDVSSYELGLSAWQ 61 Query: 62 IEDSALQTNVESATWGLARWEKVLALTTDNTKSYAARREMIKAKLRGSGTTTPEMIRRTA 121 ED Q +++ATWGL WE + ++ TD KSY RR +IKAKLRGSGTTT +MI+ TA Sbjct: 62 EEDILNQCFIDTATWGLVFWESIFSIPTDLNKSYEDRRAVIKAKLRGSGTTTRQMIKNTA 121 Query: 122 SAFSGGDVQVVEVPGAYSFEVRFVGTLGIPENMAGLIQIIEEIKPAHLDYKFVYSYTWWN 181 AFSGG+ V+ P YSF V+F+G GIP+N+ Q++E+IKPAHL Y Y+YT WN Sbjct: 122 EAFSGGECDVIMHPEDYSFTVQFIGIKGIPKNLEDFKQMLEDIKPAHLGYYLKYTYTVWN 181 Query: 182 SL--KSLTWNAAHARTWNELRVYE 203 L K+LTWN A +TWN+L+VY+ Sbjct: 182 FLKDKNLTWNQAKPKTWNDLKVYD 205 >A6LU02.1 A6LU02_CLOB8 Phage-like element pbsx protein XkdT Length = 204 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 2/203 (0%) Query: 3 YGENLYGTISYSSSPATQDGPEFSKPDLMKYLPEYYQGVLEMEQIQDSHAAECGQLAYSI 62 YG N YG + Y+ + T + K DL KY+P + + EM+ D E G L Y Sbjct: 2 YGSNQYGVVKYAENIPTPEDINKHKIDLTKYVPPFVVEIPEMKASYDVQGTEIGSLLYYA 61 Query: 63 EDSALQTNVESATWGLARWEKVLALTTDNTKSYAARREMIKAKLRGSGTTTPEMIRRTAS 122 +D Q +++ATWGL WE+ + T+ SY RRE++KAK +G GTTT +MI+ A Sbjct: 62 DDVKKQLRIDTATWGLIYWEERYGIETNLDLSYEQRREIVKAKKKGQGTTTKQMIKNVAE 121 Query: 123 AFSGGDVQVVEVPGAYSFEVRFVGTLGIPENMAGLIQIIEEIKPAHLDYKFVYSYTWWNS 182 AFSGG+V V+E Y+F ++F+G GIP NM I ++E+IKPAHL Y F Y+YT W+ Sbjct: 122 AFSGGEVDVIENTAPYTFTIQFIGVKGIPRNMQAFINMLEDIKPAHLGYVFKYTYTSWDY 181 Query: 183 L--KSLTWNAAHARTWNELRVYE 203 L KSL++N A + W++L +Y+ Sbjct: 182 LDNKSLSYNNAESIKWDDLEIYD 204 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.129 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,235,815,916 Number of extensions: 47498705 Number of successful extensions: 132578 Number of sequences better than 1.0e-05: 40 Number of HSP's gapped: 132557 Number of HSP's successfully gapped: 40 Length of query: 203 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 74 Effective length of database: 1,845,385,268 Effective search space: 136558509832 Effective search space used: 136558509832 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 128 (53.9 bits)