BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0078.0034.p (194 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DDA8.1 B1DDA8_9BACL GCN5-related N-acetyltransferase 265 2e-69 C0ZK66.1 C0ZK66_BREBN Putative uncharacterized protein 225 1e-57 C2W6Y9.1 C2W6Y9_BACCE Ribosomal-protein-serine acetyltransferase 212 1e-53 C3B2M9.1 C3B2M9_BACMY Ribosomal-protein-serine acetyltransferase 211 3e-53 C3AKQ7.1 C3AKQ7_BACMY Ribosomal-protein-serine acetyltransferase 211 3e-53 >B1DDA8.1 B1DDA8_9BACL GCN5-related N-acetyltransferase Length = 198 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 128/187 (68%), Positives = 153/187 (81%) Query: 8 PILLNIPGSFTSSRLLIRAAQWGDGDAVNEAVHESLAELRPWMPWAQIAPTAEESEASIR 67 PILL IP SF S+RLLIRA +GDG AVNEAV ES+ ELRPWMPWA PT EESE +IR Sbjct: 8 PILLTIPESFESARLLIRAPLFGDGAAVNEAVIESIEELRPWMPWANQIPTIEESEITIR 67 Query: 68 RSHLQFLERKDLRLLLFNKETGQLVGSSGLHRIDWQTRKFEIGYWVRTSCSRQGYISEAV 127 +S L+FL R DLRLLLF+KETGQLVGSSGLHR+DW+ R FEIGYW RT+ + QGYISEAV Sbjct: 68 KSRLEFLNRTDLRLLLFHKETGQLVGSSGLHRMDWKARTFEIGYWARTAYAGQGYISEAV 127 Query: 128 TAIADYAIRELGANRIEIRCDSRNTQSARVAERLGFTLEGIIRNDKRDVAGTLRDTLLFS 187 I ++AI +L ANR+EI CD+RN +SA+VAE G+TLEG++RN KR G+LRDT++FS Sbjct: 128 EGITNFAIHQLQANRVEIICDARNKRSAKVAECAGYTLEGVLRNHKRANDGSLRDTMIFS 187 Query: 188 KVRGVEY 194 KVRGVE+ Sbjct: 188 KVRGVEF 194 >C0ZK66.1 C0ZK66_BREBN Putative uncharacterized protein Length = 191 Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 104/189 (55%), Positives = 138/189 (73%) Query: 6 IEPILLNIPGSFTSSRLLIRAAQWGDGDAVNEAVHESLAELRPWMPWAQIAPTAEESEAS 65 + P+LL+ P F + RLLIRA QWGDG VNEA+ ES+ E+RPW+P+ + P+ ++SEA Sbjct: 1 MNPLLLSFPEQFETQRLLIRAPQWGDGQFVNEAIRESVNEMRPWLPFVKNLPSIDDSEAY 60 Query: 66 IRRSHLQFLERKDLRLLLFNKETGQLVGSSGLHRIDWQTRKFEIGYWVRTSCSRQGYISE 125 +R++ + FLER DL L +F K TGQ VGSSGLHR DW RKFEIGYW+RTS + +G ++E Sbjct: 61 VRKARINFLERTDLVLHIFEKNTGQFVGSSGLHRFDWNVRKFEIGYWLRTSRTGEGLMTE 120 Query: 126 AVTAIADYAIRELGANRIEIRCDSRNTQSARVAERLGFTLEGIIRNDKRDVAGTLRDTLL 185 AV I +AI EL ANR+EIRCD+RN S VA+++GFTLEG +RN + +G L DT + Sbjct: 121 AVKGIVAFAISELEANRLEIRCDTRNNASIAVAKKVGFTLEGTLRNVNLNDSGKLTDTHI 180 Query: 186 FSKVRGVEY 194 FS +G EY Sbjct: 181 FSLAKGYEY 189 >C2W6Y9.1 C2W6Y9_BACCE Ribosomal-protein-serine acetyltransferase Length = 197 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 102/186 (54%), Positives = 133/186 (71%), Gaps = 1/186 (0%) Query: 6 IEPILLNIPGSFTSSRLLIRAAQWGDGDAVNEAVHESLAELRPWMPWAQIAPTAEESEAS 65 + P+LL+ P F + RL IR + GDG AV EA++ S+ EL+PWM +AQ T EE EAS Sbjct: 4 MNPLLLDFPSEFYTDRLFIRMPKPGDGKAVYEAINASIEELKPWMVFAQKEQTEEEIEAS 63 Query: 66 IRRSHLQFLERKDLRLLLFNKETGQLVGSSGLHRIDWQTRKFEIGYWVRTSCSRQGYISE 125 IRRSH+QFL+R+DLRLL+F KETG+ V S+GLHRIDW+ KFEIGYW+ + +GY++E Sbjct: 64 IRRSHIQFLQREDLRLLVFLKETGEFVASAGLHRIDWEVLKFEIGYWIDSRFGGKGYMTE 123 Query: 126 AVTAIADYAIRELGANRIEIRCDSRNTQSARVAERLGFTLEGIIRNDKRDVAGT-LRDTL 184 A I +YA EL ANRIEIRCDS+N +S + E+LGF LEGI+ + V G LRDT Sbjct: 124 AAQGIMEYAFSELKANRIEIRCDSQNVKSRAIPEKLGFNLEGILESSSVAVDGNGLRDTC 183 Query: 185 LFSKVR 190 +F+ R Sbjct: 184 VFAMTR 189 >C3B2M9.1 C3B2M9_BACMY Ribosomal-protein-serine acetyltransferase Length = 194 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 103/186 (55%), Positives = 133/186 (71%), Gaps = 1/186 (0%) Query: 6 IEPILLNIPGSFTSSRLLIRAAQWGDGDAVNEAVHESLAELRPWMPWAQIAPTAEESEAS 65 + P+LL+ P F + RLLIR + GDG AV EA++ SL EL+PWM +AQ T EE EAS Sbjct: 1 MNPLLLDFPSEFYTDRLLIRMPKPGDGKAVYEAINASLEELKPWMTFAQKEQTEEEIEAS 60 Query: 66 IRRSHLQFLERKDLRLLLFNKETGQLVGSSGLHRIDWQTRKFEIGYWVRTSCSRQGYISE 125 IRRSH+QFL+R+DLRLL+F K+TG+ V S+GLHRI+W+ +FEIGYW+ + +GY++E Sbjct: 61 IRRSHIQFLQREDLRLLVFLKDTGEFVASAGLHRINWEIPRFEIGYWIDSRFGGKGYMTE 120 Query: 126 AVTAIADYAIRELGANRIEIRCDSRNTQSARVAERLGFTLEGIIRNDKRDVAGT-LRDTL 184 A I DYA EL ANRIEIRCD RN +S + ERLGF LEGI+ + V G LRDT Sbjct: 121 AAQGIMDYAFSELKANRIEIRCDLRNVKSRAIPERLGFKLEGILESSSVAVDGKGLRDTC 180 Query: 185 LFSKVR 190 +F+ R Sbjct: 181 VFAMTR 186 >C3AKQ7.1 C3AKQ7_BACMY Ribosomal-protein-serine acetyltransferase Length = 194 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 103/186 (55%), Positives = 133/186 (71%), Gaps = 1/186 (0%) Query: 6 IEPILLNIPGSFTSSRLLIRAAQWGDGDAVNEAVHESLAELRPWMPWAQIAPTAEESEAS 65 + P+LL+ P F + RLLIR + GDG AV EA++ SL EL+PWM +AQ T EE EAS Sbjct: 1 MNPLLLDFPSEFYTDRLLIRMPKPGDGKAVYEAINASLEELKPWMTFAQKEQTEEEIEAS 60 Query: 66 IRRSHLQFLERKDLRLLLFNKETGQLVGSSGLHRIDWQTRKFEIGYWVRTSCSRQGYISE 125 IRRSH+QFL+R+DLRLL+F K+TG+ V S+GLHRI+W+ +FEIGYW+ + +GY++E Sbjct: 61 IRRSHIQFLQREDLRLLVFLKDTGEFVASAGLHRINWEIPRFEIGYWIDSRFGGKGYMTE 120 Query: 126 AVTAIADYAIRELGANRIEIRCDSRNTQSARVAERLGFTLEGIIRNDKRDVAGT-LRDTL 184 A I DYA EL ANRIEIRCD RN +S + ERLGF LEGI+ + V G LRDT Sbjct: 121 AAQGIMDYAFSELKANRIEIRCDLRNVKSRAIPERLGFKLEGILESSSVAVDGKGLRDTC 180 Query: 185 LFSKVR 190 +F+ R Sbjct: 181 VFAMTR 186 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,069,422,606 Number of extensions: 38363907 Number of successful extensions: 101670 Number of sequences better than 1.0e-05: 1672 Number of HSP's gapped: 101874 Number of HSP's successfully gapped: 1672 Length of query: 194 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 66 Effective length of database: 1,854,806,283 Effective search space: 122417214678 Effective search space used: 122417214678 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)