BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0078.0033.p (642 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2PZ79.1 C2PZ79_BACCE Asparagine synthase 740 0.0 C2XXD5.1 C2XXD5_BACCE Asparagine synthase 738 0.0 C2VF90.1 C2VF90_BACCE Asparagine synthase 736 0.0 C2UYR4.1 C2UYR4_BACCE Asparagine synthase 736 0.0 C2U0X6.1 C2U0X6_BACCE Asparagine synthase 736 0.0 >C2PZ79.1 C2PZ79_BACCE Asparagine synthase Length = 645 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/644 (54%), Positives = 468/644 (72%), Gaps = 3/644 (0%) Query: 1 MSAIAGIYHLQHQPLDPKQGPDLMQQLSRYPADEIRTWQSTDVFLGCLSQWVTPQSLGET 60 MSAI GI H ++P+ + G LM L +YPAD+I+ W + FLGC +QW+TP+S+GE Sbjct: 1 MSAITGIIHFTNEPVSIEHGTRLMSDLQKYPADDIQIWHKENAFLGCHAQWITPESVGEQ 60 Query: 61 LPYYDSMRKLAITADAIIDNREELFERLQVPRGDRVSMPDSLLILLAYEKWGEQAPVYLV 120 LP+Y+ ++LAITADAIIDNR ELF++LQV DR +M DS LILL+Y+KWGE AP YLV Sbjct: 61 LPFYNYEKQLAITADAIIDNRHELFKKLQVDYADRKNMTDSELILLSYQKWGEAAPKYLV 120 Query: 121 GDFAFMIWDERKRALFGARDFSGNRTLYFLRSGGLLSFCTVIHPLLSMPGADRTLNERWA 180 GDFAFMIWDE+K+ LFGARDFSG+RTLYF R +FCT+I+PL S+P ++ LN++W Sbjct: 121 GDFAFMIWDEKKQILFGARDFSGSRTLYFYRGEKKFAFCTIINPLFSLPYVEKKLNKQWI 180 Query: 181 SEFLAIHTRTDVSDQYSTVYQSIEQLPPSHSISVSGGNILFSRYCTLQAPPELRLRSDQE 240 +EFLAI + D TVY+ IEQ+PPSH+I V G + FSRY T A L L+S++E Sbjct: 181 AEFLAIPVNFESVDPQLTVYKYIEQVPPSHTILVKEGKVKFSRYYTPTAGKMLNLKSNEE 240 Query: 241 YEEAFREVFGQAVRDRLRTFRAVGANXXXXXXXXXXXXFAAGELRRQGQPLHTFSSYPVD 300 YEEAFREV+ AV+ RLRT VGA+ FAA +LR + + LHTFS PV Sbjct: 241 YEEAFREVYQSAVKARLRTHHQVGAHLSGGLDSGSVVSFAAKDLRAENKKLHTFSYVPVT 300 Query: 301 NFVDFNIGKRIADERPYIQETIDYVGNIQPNFLNFPDLSPYSEIDEWLDIMEMPYKFIEN 360 F D+ RIADERP+IQ T+++VGNIQ +L P+ SP SEID+WL+ MEMPYKF EN Sbjct: 301 GFEDWTHKGRIADERPFIQSTVEHVGNIQDYYLELPERSPLSEIDDWLETMEMPYKFFEN 360 Query: 361 SYWLKGIFEQAQMKNIGVLLSGQRGNWTISWGPALDYQAKLIREFRWISFYRENRKYNES 420 ++WL G++E+A IGVLLSGQRGNWT+SWGP DYQA L+++ WI FYRE Y+++ Sbjct: 361 TFWLSGVYEKASQHGIGVLLSGQRGNWTVSWGPIFDYQAMLLKKLHWIRFYRELYLYSKN 420 Query: 421 MGANRRKVFQIVGKKAFPSLTGLLPA-KHEAPPDLIHPDFARRTDVDERLKALGIN-SGS 478 +G + +VF++V +KAFP L LL + + + P +I+P+FA++ +V +RLK G++ +G+ Sbjct: 421 IGVKKSRVFEVVRRKAFPFLYQLLSSEEQDVFPTIINPEFAKKMNVFDRLKEQGVDITGT 480 Query: 479 S-QTIYDIRRKHFEQPHVWNVNGTIATKLSLKYRVWDRDPTNDLRVIRFCLSVPESQYVQ 537 S YD++R+ FE+P+ W++NGT TKLSL+Y +WDRDPTNDLR+I+FC SVPE QYVQ Sbjct: 481 SIANAYDMKREQFEKPYYWSINGTYETKLSLRYALWDRDPTNDLRIIQFCSSVPEEQYVQ 540 Query: 538 QGVDRSLIRRAMKGLLPDEVRLNRKRRGVQGADGIYRMLPKWDAFIQELREMIQDPRTSA 597 G+DRSLIRRA K LLPD+VRLN++ RGVQGADG+YRM P W+ FI+E+ E+ DP S Sbjct: 541 NGLDRSLIRRATKKLLPDKVRLNQRIRGVQGADGVYRMAPFWNEFIEEVEELSVDPVISE 600 Query: 598 YLNNTGLAGCLDRLGSEPAPNMIFNSDFRLLTRGLVFYRFLKRL 641 +LN + + ++ EP P F+ DFR+L R L+FYRF+K++ Sbjct: 601 FLNVEVIKKAISKICKEPRPEYAFDLDFRVLMRSLIFYRFIKKV 644 >C2XXD5.1 C2XXD5_BACCE Asparagine synthase Length = 645 Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/643 (53%), Positives = 465/643 (72%), Gaps = 3/643 (0%) Query: 1 MSAIAGIYHLQHQPLDPKQGPDLMQQLSRYPADEIRTWQSTDVFLGCLSQWVTPQSLGET 60 MSAI GI H ++P+ + G ++M +L +YPAD+I+ W + FLGC +QW+TP+S+GE Sbjct: 1 MSAITGIIHFTNEPVSIEHGREVMSRLYKYPADDIQIWHKENAFLGCHAQWITPESVGEQ 60 Query: 61 LPYYDSMRKLAITADAIIDNREELFERLQVPRGDRVSMPDSLLILLAYEKWGEQAPVYLV 120 LP+Y+ ++LAITADAIIDNR+ELFE+LQV DR +M DS LILL+Y+KWGE AP YLV Sbjct: 61 LPFYNYEKQLAITADAIIDNRDELFEKLQVDYSDRKNMTDSELILLSYQKWGEAAPKYLV 120 Query: 121 GDFAFMIWDERKRALFGARDFSGNRTLYFLRSGGLLSFCTVIHPLLSMPGADRTLNERWA 180 GDFAFMIWDE+K+ LFGARDFSG+RTLYF R +FCT+I+PL S+P ++ LN++W Sbjct: 121 GDFAFMIWDEKKQILFGARDFSGSRTLYFYRGEEKFAFCTIINPLFSLPYVEKKLNKQWI 180 Query: 181 SEFLAIHTRTDVSDQYSTVYQSIEQLPPSHSISVSGGNILFSRYCTLQAPPELRLRSDQE 240 +EFLAI + D TVY+ IEQ+PPSH+I V G + FSRY T L L+S++E Sbjct: 181 AEFLAIPVNFESVDPQLTVYKYIEQVPPSHTILVKEGEVKFSRYYTPTVGKMLNLKSNEE 240 Query: 241 YEEAFREVFGQAVRDRLRTFRAVGANXXXXXXXXXXXXFAAGELRRQGQPLHTFSSYPVD 300 YEEAFREV+ AV+ RLRT VGA+ FAA +LR + + LHT+S PV+ Sbjct: 241 YEEAFREVYQSAVKARLRTHHKVGAHLSGGLDSGSVVSFAARDLRTENKKLHTYSYVPVE 300 Query: 301 NFVDFNIGKRIADERPYIQETIDYVGNIQPNFLNFPDLSPYSEIDEWLDIMEMPYKFIEN 360 FVD+ RIADERP+IQ T+++VGNIQ +L P+ SP SEID+WL+ MEMPYKF EN Sbjct: 301 GFVDWTHKGRIADERPFIQSTVEHVGNIQDYYLELPERSPLSEIDDWLETMEMPYKFFEN 360 Query: 361 SYWLKGIFEQAQMKNIGVLLSGQRGNWTISWGPALDYQAKLIREFRWISFYRENRKYNES 420 ++WL G++E+A IGVLLSGQRGNWT+SWGP LDYQA L+++ WI FYRE Y+ + Sbjct: 361 TFWLSGVYEKASQHGIGVLLSGQRGNWTVSWGPILDYQAMLLKKLHWIRFYRELYLYSRN 420 Query: 421 MGANRRKVFQIVGKKAFPSLTGLL-PAKHEAPPDLIHPDFARRTDVDERLK--ALGINSG 477 +G + +VF++V +KAFP L LL K +A +I+P+FAR +V +RL+ + I Sbjct: 421 IGVKKSRVFEVVRRKAFPFLHQLLFSGKQDANSAIINPEFAREMNVFDRLREQEIDITGT 480 Query: 478 SSQTIYDIRRKHFEQPHVWNVNGTIATKLSLKYRVWDRDPTNDLRVIRFCLSVPESQYVQ 537 S YD++R+ FE+P+ W++NGT TKLSL+Y +WDRDPTNDLR+I+FCLSVPE QYVQ Sbjct: 481 SISNAYDMKREQFEKPYYWSINGTYETKLSLRYALWDRDPTNDLRLIQFCLSVPEEQYVQ 540 Query: 538 QGVDRSLIRRAMKGLLPDEVRLNRKRRGVQGADGIYRMLPKWDAFIQELREMIQDPRTSA 597 G+DR+LIRRA K LPD+VRLN++ RG+QGADG+YRM P W+ FI+E+ E+ DP S Sbjct: 541 NGLDRALIRRATKNFLPDKVRLNQRVRGIQGADGVYRMAPFWNEFIEEVEELSVDPVISE 600 Query: 598 YLNNTGLAGCLDRLGSEPAPNMIFNSDFRLLTRGLVFYRFLKR 640 +LN + + ++ EP P F+ DFR+L R L+FYRF+K+ Sbjct: 601 FLNVEVIKKAISKICKEPRPEYAFDLDFRVLMRSLIFYRFIKK 643 >C2VF90.1 C2VF90_BACCE Asparagine synthase Length = 645 Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/643 (53%), Positives = 464/643 (72%), Gaps = 3/643 (0%) Query: 1 MSAIAGIYHLQHQPLDPKQGPDLMQQLSRYPADEIRTWQSTDVFLGCLSQWVTPQSLGET 60 MSAI GI H ++P+ + G LM +L +YPAD+I+ W + FLGC +QW+TP+S+GE Sbjct: 1 MSAITGIIHFNNEPISIEHGTRLMSELQKYPADDIQVWHKENAFLGCHAQWITPESVGEQ 60 Query: 61 LPYYDSMRKLAITADAIIDNREELFERLQVPRGDRVSMPDSLLILLAYEKWGEQAPVYLV 120 LP+Y+ ++LAITADAIIDNR ELFE+LQV DR +M DS LILL+Y+KWGE AP YLV Sbjct: 61 LPFYNYEKQLAITADAIIDNRNELFEKLQVDYSDRKNMTDSELILLSYQKWGEAAPKYLV 120 Query: 121 GDFAFMIWDERKRALFGARDFSGNRTLYFLRSGGLLSFCTVIHPLLSMPGADRTLNERWA 180 GDFAFMIWDE+K+ LFGARDFSG+RTLYF R L+FCT+I+PL ++P ++ LNE+W Sbjct: 121 GDFAFMIWDEKKQILFGARDFSGSRTLYFYRGEEKLAFCTIINPLFTLPYIEKKLNEQWL 180 Query: 181 SEFLAIHTRTDVSDQYSTVYQSIEQLPPSHSISVSGGNILFSRYCTLQAPPELRLRSDQE 240 +EFLAI + D TVY+ IEQ+PPSH+I V G + FSRY T L L+S++E Sbjct: 181 AEFLAIPVNFESVDPQLTVYKYIEQVPPSHTILVKEGEVKFSRYYTPTVGKMLNLKSNEE 240 Query: 241 YEEAFREVFGQAVRDRLRTFRAVGANXXXXXXXXXXXXFAAGELRRQGQPLHTFSSYPVD 300 YEEAFREV+ AV+ RLRT VGA+ FAA +LR + + LHT+S PV+ Sbjct: 241 YEEAFREVYKSAVKARLRTHHQVGAHLSGGLDSGSVVSFAARDLRTENKKLHTYSYVPVE 300 Query: 301 NFVDFNIGKRIADERPYIQETIDYVGNIQPNFLNFPDLSPYSEIDEWLDIMEMPYKFIEN 360 F D+ RIADERP+IQ T+++VGNIQ +L P+ SP SEID+WL+ MEMPYKF EN Sbjct: 301 GFEDWTHKGRIADERPFIQSTVEHVGNIQDYYLELPERSPLSEIDDWLETMEMPYKFFEN 360 Query: 361 SYWLKGIFEQAQMKNIGVLLSGQRGNWTISWGPALDYQAKLIREFRWISFYRENRKYNES 420 ++WL G++E+A + IGVLLSGQRGNWT+SWGP LDYQA L+++ WI FYRE Y+ + Sbjct: 361 TFWLSGVYEKASQQGIGVLLSGQRGNWTVSWGPILDYQAMLLKKLHWIRFYRELYLYSRN 420 Query: 421 MGANRRKVFQIVGKKAFPSLTGLL-PAKHEAPPDLIHPDFARRTDVDERLK--ALGINSG 477 +G + +VF++V +KAFP L LL K +A +I+P+FAR +V +RL+ + I Sbjct: 421 IGVKKSRVFEVVRRKAFPFLHQLLFSGKQDANSVIINPEFAREMNVFDRLREQEIDITGT 480 Query: 478 SSQTIYDIRRKHFEQPHVWNVNGTIATKLSLKYRVWDRDPTNDLRVIRFCLSVPESQYVQ 537 + Y+++R+ FE+P+ W++NGT TKLSL+Y +WDRDPTNDLR+I+FCLSVPE QYVQ Sbjct: 481 AISNAYEMKREQFEKPYYWSINGTYETKLSLRYALWDRDPTNDLRLIQFCLSVPEEQYVQ 540 Query: 538 QGVDRSLIRRAMKGLLPDEVRLNRKRRGVQGADGIYRMLPKWDAFIQELREMIQDPRTSA 597 G+DR+LIRRA K LPD+VRLN++ RG+QGADG+YRM P W+ FI+E+ E+ DP S Sbjct: 541 NGLDRALIRRATKSFLPDKVRLNQRVRGIQGADGVYRMAPFWNEFIEEVEELSVDPVISE 600 Query: 598 YLNNTGLAGCLDRLGSEPAPNMIFNSDFRLLTRGLVFYRFLKR 640 +LN + + ++ EP P F+ DFR+L R L+FYRF+K+ Sbjct: 601 FLNVEVIKKAISKICKEPRPEYAFDLDFRVLMRSLIFYRFIKK 643 >C2UYR4.1 C2UYR4_BACCE Asparagine synthase Length = 645 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/643 (53%), Positives = 464/643 (72%), Gaps = 3/643 (0%) Query: 1 MSAIAGIYHLQHQPLDPKQGPDLMQQLSRYPADEIRTWQSTDVFLGCLSQWVTPQSLGET 60 MSAI GI H ++P+ + G LM +L +YPAD+I+ W + FLGC +QW+TP+S+GE Sbjct: 1 MSAITGIIHFNNEPISIEHGTRLMSELQKYPADDIQIWHKENAFLGCHAQWITPESVGEQ 60 Query: 61 LPYYDSMRKLAITADAIIDNREELFERLQVPRGDRVSMPDSLLILLAYEKWGEQAPVYLV 120 LP+Y+ ++LAITADAIIDNR ELFE+LQV DR +M DS LILL+Y+KWGE AP YLV Sbjct: 61 LPFYNYEKQLAITADAIIDNRNELFEKLQVDYSDRKNMTDSELILLSYQKWGEAAPKYLV 120 Query: 121 GDFAFMIWDERKRALFGARDFSGNRTLYFLRSGGLLSFCTVIHPLLSMPGADRTLNERWA 180 GDFAFMIWDE+K+ LFGARDFSG+RTLYF R L+FCT+I+PL ++P ++ LNE+W Sbjct: 121 GDFAFMIWDEKKQILFGARDFSGSRTLYFYRGEEKLAFCTIINPLFTLPYIEKKLNEQWL 180 Query: 181 SEFLAIHTRTDVSDQYSTVYQSIEQLPPSHSISVSGGNILFSRYCTLQAPPELRLRSDQE 240 +EFLAI + D TVY+ IEQ+PPSH+I V G + FSRY T L L+S++E Sbjct: 181 AEFLAIPVNFESVDPQLTVYKYIEQVPPSHTILVKEGEVKFSRYYTPTVGKMLNLKSNEE 240 Query: 241 YEEAFREVFGQAVRDRLRTFRAVGANXXXXXXXXXXXXFAAGELRRQGQPLHTFSSYPVD 300 YEEAFREV+ AV+ RLRT VGA+ FAA +LR + + LHT+S PV+ Sbjct: 241 YEEAFREVYKSAVKARLRTHHQVGAHLSGGLDSGSVVSFAARDLRTENKKLHTYSYVPVE 300 Query: 301 NFVDFNIGKRIADERPYIQETIDYVGNIQPNFLNFPDLSPYSEIDEWLDIMEMPYKFIEN 360 F D+ RIADERP+IQ T+++VGNIQ +L P+ SP SEID+WL+ MEMPYKF EN Sbjct: 301 GFEDWTHKGRIADERPFIQSTVEHVGNIQDYYLELPERSPLSEIDDWLETMEMPYKFFEN 360 Query: 361 SYWLKGIFEQAQMKNIGVLLSGQRGNWTISWGPALDYQAKLIREFRWISFYRENRKYNES 420 ++WL G++E+A + IGVLLSGQRGNWT+SWGP LDYQA L+++ WI FYRE Y+ + Sbjct: 361 TFWLSGVYEKASQQGIGVLLSGQRGNWTVSWGPILDYQAMLLKKLHWIRFYRELYLYSRN 420 Query: 421 MGANRRKVFQIVGKKAFPSLTGLL-PAKHEAPPDLIHPDFARRTDVDERLK--ALGINSG 477 +G + +VF++V +KAFP L LL K +A +I+P+FAR +V +RL+ + I Sbjct: 421 IGVKKSRVFEVVRRKAFPFLHQLLFSGKQDANSVIINPEFAREMNVFDRLREQEIDITGT 480 Query: 478 SSQTIYDIRRKHFEQPHVWNVNGTIATKLSLKYRVWDRDPTNDLRVIRFCLSVPESQYVQ 537 + Y+++R+ FE+P+ W++NGT TKLSL+Y +WDRDPTNDLR+I+FCLSVPE QYVQ Sbjct: 481 AISNAYEMKREQFEKPYYWSINGTYETKLSLRYALWDRDPTNDLRLIQFCLSVPEEQYVQ 540 Query: 538 QGVDRSLIRRAMKGLLPDEVRLNRKRRGVQGADGIYRMLPKWDAFIQELREMIQDPRTSA 597 G+DR+LIRRA K LPD+VRLN++ RG+QGADG+YRM P W+ FI+E+ E+ DP S Sbjct: 541 NGLDRALIRRATKSFLPDKVRLNQRVRGIQGADGVYRMAPFWNEFIEEVEELSVDPVISE 600 Query: 598 YLNNTGLAGCLDRLGSEPAPNMIFNSDFRLLTRGLVFYRFLKR 640 +LN + + ++ EP P F+ DFR+L R L+FYRF+K+ Sbjct: 601 FLNVEVIKKAISKICKEPRPEYAFDLDFRVLMRSLIFYRFIKK 643 >C2U0X6.1 C2U0X6_BACCE Asparagine synthase Length = 645 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/643 (53%), Positives = 464/643 (72%), Gaps = 3/643 (0%) Query: 1 MSAIAGIYHLQHQPLDPKQGPDLMQQLSRYPADEIRTWQSTDVFLGCLSQWVTPQSLGET 60 MSAI GI H ++P+ + G LM +L +YPAD+I+ W + FLGC +QW+TP+S+GE Sbjct: 1 MSAITGIIHFNNEPISIEHGTRLMSELQKYPADDIQIWHKENAFLGCHAQWITPESVGEQ 60 Query: 61 LPYYDSMRKLAITADAIIDNREELFERLQVPRGDRVSMPDSLLILLAYEKWGEQAPVYLV 120 LP+Y+ ++LAITADAIIDNR ELFE+LQV DR +M DS LILL+Y+KWGE AP YLV Sbjct: 61 LPFYNYEKQLAITADAIIDNRNELFEKLQVDYSDRKNMTDSELILLSYQKWGEAAPKYLV 120 Query: 121 GDFAFMIWDERKRALFGARDFSGNRTLYFLRSGGLLSFCTVIHPLLSMPGADRTLNERWA 180 GDFAFMIWDE+K+ LFGARDFSG+RTLYF R L+FCT+I+PL ++P ++ LNE+W Sbjct: 121 GDFAFMIWDEKKQILFGARDFSGSRTLYFYRGEEKLAFCTIINPLFTLPYIEKKLNEQWL 180 Query: 181 SEFLAIHTRTDVSDQYSTVYQSIEQLPPSHSISVSGGNILFSRYCTLQAPPELRLRSDQE 240 +EFLAI + D TVY+ IEQ+PPSH+I V G + FSRY T L L+S++E Sbjct: 181 AEFLAIPVNFESVDPQLTVYKYIEQVPPSHTILVKEGEVKFSRYYTPTVGKMLNLKSNEE 240 Query: 241 YEEAFREVFGQAVRDRLRTFRAVGANXXXXXXXXXXXXFAAGELRRQGQPLHTFSSYPVD 300 YEEAFREV+ AV+ RLRT VGA+ FAA +LR + + LHT+S PV+ Sbjct: 241 YEEAFREVYKSAVKARLRTHHQVGAHLSGGLDSGSVVSFAARDLRTENKKLHTYSYVPVE 300 Query: 301 NFVDFNIGKRIADERPYIQETIDYVGNIQPNFLNFPDLSPYSEIDEWLDIMEMPYKFIEN 360 F D+ RIADERP+IQ T+++VGNIQ +L P+ SP SEID+WL+ MEMPYKF EN Sbjct: 301 GFEDWTHKGRIADERPFIQSTVEHVGNIQDYYLELPERSPLSEIDDWLETMEMPYKFFEN 360 Query: 361 SYWLKGIFEQAQMKNIGVLLSGQRGNWTISWGPALDYQAKLIREFRWISFYRENRKYNES 420 ++WL G++E+A + IGVLLSGQRGNWT+SWGP LDYQA L+++ WI FYRE Y+ + Sbjct: 361 TFWLSGVYEKASQQGIGVLLSGQRGNWTVSWGPILDYQAMLLKKLHWIRFYRELYLYSRN 420 Query: 421 MGANRRKVFQIVGKKAFPSLTGLL-PAKHEAPPDLIHPDFARRTDVDERLK--ALGINSG 477 +G + +VF++V +KAFP L LL K +A +I+P+FAR +V +RL+ + I Sbjct: 421 IGVKKSRVFEVVRRKAFPFLHQLLFSGKQDANSVIINPEFAREMNVFDRLREQEIDITGT 480 Query: 478 SSQTIYDIRRKHFEQPHVWNVNGTIATKLSLKYRVWDRDPTNDLRVIRFCLSVPESQYVQ 537 + Y+++R+ FE+P+ W++NGT TKLSL+Y +WDRDPTNDLR+I+FCLSVPE QYVQ Sbjct: 481 AISNAYEMKREQFEKPYYWSINGTYETKLSLRYALWDRDPTNDLRLIQFCLSVPEEQYVQ 540 Query: 538 QGVDRSLIRRAMKGLLPDEVRLNRKRRGVQGADGIYRMLPKWDAFIQELREMIQDPRTSA 597 G+DR+LIRRA K LPD+VRLN++ RG+QGADG+YRM P W+ FI+E+ E+ DP S Sbjct: 541 NGLDRALIRRATKSFLPDKVRLNQRVRGIQGADGVYRMAPFWNEFIEEVEELSVDPVISE 600 Query: 598 YLNNTGLAGCLDRLGSEPAPNMIFNSDFRLLTRGLVFYRFLKR 640 +LN + + ++ EP P F+ DFR+L R L+FYRF+K+ Sbjct: 601 FLNVEVIKKAISKICKEPRPEYAFDLDFRVLMRSLIFYRFIKK 643 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,905,290,205 Number of extensions: 165522930 Number of successful extensions: 337588 Number of sequences better than 1.0e-05: 630 Number of HSP's gapped: 337470 Number of HSP's successfully gapped: 635 Length of query: 642 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 500 Effective length of database: 1,722,912,073 Effective search space: 861456036500 Effective search space used: 861456036500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)