BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0078.0025.p (260 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q4C5C9.1 Q4C5C9_CROWT Putative uncharacterized protein 143 2e-32 Q8YLB6.1 Q8YLB6_ANASP Alr7019 protein 126 2e-27 B9E3F2.1 B9E3F2_CLOK1 Putative uncharacterized protein 125 3e-27 A5MZG3.1 A5MZG3_CLOK5 Putative uncharacterized protein 125 3e-27 A7C1M3.1 A7C1M3_9GAMM Putative uncharacterized protein 115 6e-24 >Q4C5C9.1 Q4C5C9_CROWT Putative uncharacterized protein Length = 240 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 120/205 (58%) Query: 55 LDFMYSAYLLSQFRVTALFPILVELFSLPEELLDMIFDDILTDAGGRMLASVYDGDLSLL 114 L +Y+ +LL+QFR T+ +P++V L S E++++ + D++T+ GR+L SVYDG L L+ Sbjct: 8 LSLIYALFLLAQFRETSAYPLIVRLVSKNEQVIEDLLGDLVTEDLGRILTSVYDGRLDLI 67 Query: 115 KRLIENGEASEYARGQGLRALTILVYEGQILRETAISYVKELLTSKRVDSDYYFYAEIVC 174 + LIEN EY R ++ LTILV + RE I+Y + L SK Y + +VC Sbjct: 68 QELIENHSLYEYVRTAAIKCLTILVAHKSLSREVVINYFRLLFNSKLKKDGSYVWTSLVC 127 Query: 175 DAVDLYPEEVYADIEKLYEDEALDPYVILLDEVKATLQMSQAEAMQRKSTQESYQYINDI 234 ++ +L P+E+ +I K +E + ++P+ I L +V+ +L+ + +++ Y IN+ Sbjct: 128 ESTNLCPKELEIEIRKTFEADLIEPFFINLKDVEKSLKTNINQSLSSLRKNRHYSLINNT 187 Query: 235 HAEMENWVCFQPESSGKIEMLREIG 259 AE+E W CF+ E S K E+ Sbjct: 188 IAEIEGWACFKHEPSKKTISTEEVA 212 >Q8YLB6.1 Q8YLB6_ANASP Alr7019 protein Length = 293 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 126/236 (53%), Gaps = 4/236 (1%) Query: 14 RRFPXXXXXXXXXXXXXAIPHLLEIMRELQAH-PQLAEDPARLDFMYSAYLLSQFRVTAL 72 + FP P L+ + +L + QL E + +++ YLL+QFR + Sbjct: 15 KTFPRLALEAAIEQREAITPILISTLDKLSENLEQLLEKEDYILHIHALYLLAQFREESA 74 Query: 73 FPILVELFSLPEELLDMIFDDILTDAGGRMLASVYDGDLSLLKRLIENGEASEYARGQGL 132 +P +++ FS+P ++ + DI+T+ GR+LA V G + +K+LIEN +A+EY RG L Sbjct: 75 YPTIIKFFSVPGDVALDVTGDIVTEDLGRILACVSGGRIEPIKQLIENSKANEYVRGAAL 134 Query: 133 RALTILVYEGQILRETAISYVKELLTSKRVDS-DYYFYAEIVCDAVDLYPEEVYADIEKL 191 AL +L+ + I RE I Y +L ++ +D D+Y +V ++ L E+ I + Sbjct: 135 EALLVLIAQEVITREQVIQYYAKLFST--LDKEDHYIQTTLVTNSAQLCAVELQEQINRA 192 Query: 192 YEDEALDPYVILLDEVKATLQMSQAEAMQRKSTQESYQYINDIHAEMENWVCFQPE 247 +E ++D + I ++V L + + EA+ R Y +I D+ EMENW CFQP+ Sbjct: 193 FEQNSVDLFFIDQEDVSTYLVVEKEEALNRLRKNPKYSFIKDVILEMENWSCFQPQ 248 >B9E3F2.1 B9E3F2_CLOK1 Putative uncharacterized protein Length = 290 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 3/246 (1%) Query: 1 MQHLLDSIKYNKDRRFPXXXXXXXXXXXXXAIPHLLEIMRELQ-AHPQLAEDPARLDFMY 59 M LL+ IKY + +FP IP L+EI+R + + ++ P +Y Sbjct: 9 MNALLEQIKY-ANGKFPEEQIRQIISRKEEFIPELIEILRSAEDNYNEILGKPNYFLHIY 67 Query: 60 SAYLLSQFRVTALFPILVELFSLPEELLDMIFDDILTDAGGRMLASVYDGDLSLLKRLIE 119 +AYLL+QF F ++++L SLP+E++ IF D++T+ R+LASV G++ +K L+E Sbjct: 68 AAYLLAQFNEEQSFSLIIDLISLPDEIVFKIFGDVVTEDLHRILASVCKGNVQPVKELLE 127 Query: 120 NGEASEYARGQGLRALTILVYEGQILRETAISYVKELLTSKRVDSDYYFYAEIVCDAVDL 179 N +EY R ++ +L EG I ++ I Y + LL K + +V ++ Sbjct: 128 NENVNEYIRVAAIKTFPVLWVEGVISKDEIIKYYRSLLKEKLKRERSVVWGSLVSSCCEI 187 Query: 180 YPEEVYADIEKLYEDEALDPYVILLDEVKATLQMSQAEAMQRKSTQESYQYINDIHAEME 239 P+E+Y +I++ Y+D ++ + I L+EV+ + E + + Y++I D ++E Sbjct: 188 CPDELYEEIKEAYKDNLIENFYISLEEVEENFDIEDDERIL-NLKRRGYEFIRDTIKDLE 246 Query: 240 NWVCFQ 245 W CFQ Sbjct: 247 YWPCFQ 252 >A5MZG3.1 A5MZG3_CLOK5 Putative uncharacterized protein Length = 282 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 3/246 (1%) Query: 1 MQHLLDSIKYNKDRRFPXXXXXXXXXXXXXAIPHLLEIMRELQ-AHPQLAEDPARLDFMY 59 M LL+ IKY + +FP IP L+EI+R + + ++ P +Y Sbjct: 1 MNALLEQIKY-ANGKFPEEQIRQIISRKEEFIPELIEILRSAEDNYNEILGKPNYFLHIY 59 Query: 60 SAYLLSQFRVTALFPILVELFSLPEELLDMIFDDILTDAGGRMLASVYDGDLSLLKRLIE 119 +AYLL+QF F ++++L SLP+E++ IF D++T+ R+LASV G++ +K L+E Sbjct: 60 AAYLLAQFNEEQSFSLIIDLISLPDEIVFKIFGDVVTEDLHRILASVCKGNVQPVKELLE 119 Query: 120 NGEASEYARGQGLRALTILVYEGQILRETAISYVKELLTSKRVDSDYYFYAEIVCDAVDL 179 N +EY R ++ +L EG I ++ I Y + LL K + +V ++ Sbjct: 120 NENVNEYIRVAAIKTFPVLWVEGVISKDEIIKYYRSLLKEKLKRERSVVWGSLVSSCCEI 179 Query: 180 YPEEVYADIEKLYEDEALDPYVILLDEVKATLQMSQAEAMQRKSTQESYQYINDIHAEME 239 P+E+Y +I++ Y+D ++ + I L+EV+ + E + + Y++I D ++E Sbjct: 180 CPDELYEEIKEAYKDNLIENFYISLEEVEENFDIEDDERIL-NLKRRGYEFIRDTIKDLE 238 Query: 240 NWVCFQ 245 W CFQ Sbjct: 239 YWPCFQ 244 >A7C1M3.1 A7C1M3_9GAMM Putative uncharacterized protein Length = 497 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 12/197 (6%) Query: 58 MYSAYLLSQFRVTALFPILVELFSLPEELLDMIFDDILTDAGGRMLASVYDGDLSLLKRL 117 +Y+ YLL+QFR +PI++ FSLP ++ I D++T+ R+LASVYDGD +LLK L Sbjct: 248 IYALYLLAQFREQRAYPIIINFFSLPGKISLEITGDVVTEDLHRILASVYDGDDTLLKNL 307 Query: 118 IENGEASEYARGQGLRALTILVYEGQILRETAISYVKELLTSKRVDSDYYFYAEIVCDAV 177 IE+ + +EY R G+R LV GQ R+ I+Y+K L K + + +V + Sbjct: 308 IEDEQVNEYVRDAGIRTFVTLVVCGQKSRDEVIAYLKTLF-GKLERKPSFTWNSLVYVCM 366 Query: 178 DLYPEEVYADIEKLYEDEALDPYVILLDEV----------KATLQMSQAEAMQRKSTQES 227 DLYPEEV A+I ++ + E L V+L E+ K + + + + +++ + Sbjct: 367 DLYPEEVDAEIRQVAK-EGLTEEVLLTKEINILGLHEEALKKSYALGKEKTLEKLQNDDH 425 Query: 228 YQYINDIHAEMENWVCF 244 Y I+D E+++W CF Sbjct: 426 YTLIDDTIRELKDWSCF 442 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 9/182 (4%) Query: 64 LSQFRVTALFPILVELFSLPEELLDMIFDDILTDAG---GRMLASVYDGDLSLLKRLIEN 120 ++QFR +P++V+ FS+ E+ D F ++ D GR+LASV GD L+K LIEN Sbjct: 1 MAQFREKQAYPLIVDFFSISED--DEFFLEVTEDVANNVGRILASVCGGDDRLIKSLIEN 58 Query: 121 GEASEYARGQGLRALTILVYEGQILRETAISYVKELLTSKRV-DSDY-YFYAEIVCDAVD 178 +A +YARG+ + AL LV G+ RE ++Y K L K D ++ + ++V A Sbjct: 59 DDAYKYARGEAIGALVCLVQSGEKSREDVLAYFKTLFQEKLTRDPEFDIVWEQLVEHATA 118 Query: 179 LYPEEVYADIEKLYEDEALDPYVILLDEVKATLQMSQAEAMQRKSTQESYQYINDIHAEM 238 LYPEE+Y DI+++Y DE + + I L+ V+ L +++ ++R +Y I D A+M Sbjct: 119 LYPEELYEDIKQVYADELVKGWFIKLEHVEHQLALTKERILKR--LPRNYSLIEDAIADM 176 Query: 239 EN 240 ++ Sbjct: 177 KS 178 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,402,576,965 Number of extensions: 54843389 Number of successful extensions: 154909 Number of sequences better than 1.0e-05: 18 Number of HSP's gapped: 154884 Number of HSP's successfully gapped: 19 Length of query: 260 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 127 Effective length of database: 1,807,701,208 Effective search space: 229578053416 Effective search space used: 229578053416 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)