BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0078.0003.p (842 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGE5.1 B3KGE5_9BACI Glycoside hydrolase family 3 domain protein 666 0.0 B3KH87.1 B3KH87_9BACI Glycoside hydrolase family 3 domain protein 572 e-161 A6EIP6.1 A6EIP6_9SPHI Putative beta-glucosidase 425 e-117 Q5LH74.1 Q5LH74_BACFN Putative beta-glucosidase 407 e-111 Q64Y34.1 Q64Y34_BACFR Periplasmic beta-glucosidase 407 e-111 >B3KGE5.1 B3KGE5_9BACI Glycoside hydrolase family 3 domain protein Length = 765 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/403 (78%), Positives = 346/403 (85%) Query: 1 MTYKDPSRPSAERAEHLLGLMTLEEKAAQLVQPFGWQAYEHTDGEITLTEDFKRQVAETG 60 MTYKDP +P AER EHLLGLM LEEK QL+QPFGW+ YE +G+ITLT+ FK QV G Sbjct: 1 MTYKDPRKPIAERVEHLLGLMNLEEKVGQLIQPFGWKTYEGNEGQITLTDSFKEQVKNGG 60 Query: 61 IGSLYGMLRADPWTGVTLASGLSPRQGAEAVNALQRYAIENSRLGIPILIGEECSHGHMA 120 +GSLYG LRADPWTGVTL +GLSPR+GAEAVN +QRYA+E SRLGIPILIGEECSHGHMA Sbjct: 61 VGSLYGTLRADPWTGVTLETGLSPREGAEAVNHIQRYAVEQSRLGIPILIGEECSHGHMA 120 Query: 121 IGATVFPVPLSLGSAWNVDLYREMCRAVALETRSQGGTVTYSPVLDVVRDPRWGRTEECF 180 IG TVFPVPLS+GS WNVDLYR+MCRAVALETRSQGG VTYSPVLDVVRDPRWGRTEECF Sbjct: 121 IGGTVFPVPLSIGSTWNVDLYRDMCRAVALETRSQGGAVTYSPVLDVVRDPRWGRTEECF 180 Query: 181 GEDAYLISEMAAASVEGLQGESLSSQESVGATLKHFVGYGSSEGGRNAGPVHMGWRELLE 240 GED YLISE A ASVEGLQGESL S SV ATLKHFVGYGSSEGGRNAGPVHMG REL+E Sbjct: 181 GEDPYLISEYAVASVEGLQGESLDSPSSVAATLKHFVGYGSSEGGRNAGPVHMGTRELME 240 Query: 241 VDLLPFKKAVEAGAVSIMPAYNEIDGVPCTTNTALMEDILRGAWGFDGLVITDCGAIEML 300 VD+LPFKKAVEAGA SIMPAYNEIDGVPCT NT L++ ILR WGFDG+VITDCGAI+ML Sbjct: 241 VDMLPFKKAVEAGAASIMPAYNEIDGVPCTVNTELLDGILRKEWGFDGMVITDCGAIDML 300 Query: 301 AAGHDVAEDGLDASVQAISSGIDMEMSGAMFGKHLVNAVRTGKLAEGILDRAVQRVLELK 360 A+GHD AEDG+DA+VQAI +GIDMEMSG MFGKHL AV + KL +LD AV+RVL LK Sbjct: 301 ASGHDTAEDGMDAAVQAIRAGIDMEMSGEMFGKHLQKAVESNKLEVSVLDEAVRRVLTLK 360 Query: 361 FKLGLFEQPYADPDAAEQFIGSVKHRELARRLAAESIILLKNE 403 FKLGLFE PY DP AE IGS +H LAR+LAAE I+LLKNE Sbjct: 361 FKLGLFENPYVDPQTAENVIGSEQHVGLARQLAAEGIVLLKNE 403 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 262/349 (75%), Positives = 300/349 (85%), Gaps = 2/349 (0%) Query: 490 VAVIGPNADAPYNQLGDYTSPQQRSSIVTVLDGVRSKLG--AERVLYAPGCRIKGDSREG 547 +AVIGPNAD YNQLGDYTSPQ +++ TVL G+R+KLG A+RVLYAPGCRIK DSREG Sbjct: 416 IAVIGPNADQGYNQLGDYTSPQPPAAVTTVLGGIRAKLGEEAQRVLYAPGCRIKDDSREG 475 Query: 548 FEAALACAEQADTVVMVLGGSSARDFGEGTIDLKTGASKVTEHSWSDMDCGEGIDRISLA 607 FE AL CAEQADTVVMVLGGSSARDFGEGTIDL+TGASKVT+ + SDMDCGEGIDR++L Sbjct: 476 FEFALTCAEQADTVVMVLGGSSARDFGEGTIDLRTGASKVTDDALSDMDCGEGIDRMTLQ 535 Query: 608 LSGVQLELAQEIHKLGKPLVVVYINGRPVSEPWIEEHAHAILEAWYPGQEGGHAVADILF 667 LSGVQLEL QEIHKLGK ++VVYINGRP++EPWI+EHA AILEAWYPGQEGGHAVADILF Sbjct: 536 LSGVQLELVQEIHKLGKRMIVVYINGRPIAEPWIDEHADAILEAWYPGQEGGHAVADILF 595 Query: 668 GDVNPSGRLTISWPKDAGQLPVYYNGKRSRGKRYLEADSQPRYPFGFGLSYTSFSYSELK 727 GDVNPSG+LT+S PK GQLPVYYNGKRSRGKRYLE DSQPRYPFG+GLSYT FSYS+++ Sbjct: 596 GDVNPSGKLTMSIPKHVGQLPVYYNGKRSRGKRYLEEDSQPRYPFGYGLSYTEFSYSDIQ 655 Query: 728 VEPQAITADETATVTVRVENTGELTGAEVVQLYISDVASKVTRPAKELKGFRKITLSPGE 787 + P+ I D TA V+V V N+G+ G+EVVQLY+SD ASK TRPA+ELKGF+KI L PGE Sbjct: 656 MTPEVIGTDGTAVVSVNVTNSGDCEGSEVVQLYVSDAASKYTRPARELKGFQKIFLQPGE 715 Query: 788 AQIVEFEIGAEQLQYIGPDYQPVVEPGAFKILVGSHVNDVLEQDLNVME 836 + VEF IG EQLQYIG DY+ VVEPG F++++G HVND L DL V E Sbjct: 716 RRKVEFTIGPEQLQYIGQDYRQVVEPGLFRVMLGRHVNDTLSADLTVQE 764 >B3KH87.1 B3KH87_9BACI Glycoside hydrolase family 3 domain protein Length = 763 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 275/404 (68%), Positives = 328/404 (81%), Gaps = 1/404 (0%) Query: 1 MTYKDPSRPSAERAEHLLGLMTLEEKAAQLVQPFGWQAY-EHTDGEITLTEDFKRQVAET 59 M YKD + P + R E LL MT+EEK QL+QPFGW+AY + DG I LTE+FK Q+AE Sbjct: 1 MDYKDAAWPVSRRVEDLLKRMTVEEKIGQLIQPFGWKAYIRNDDGTIKLTEEFKSQLAEG 60 Query: 60 GIGSLYGMLRADPWTGVTLASGLSPRQGAEAVNALQRYAIENSRLGIPILIGEECSHGHM 119 GIGSLYG LRADPWTGVTLA+GLSPR+GA+AVNA+QRYA+E+SRLGIPIL GEECSHGHM Sbjct: 61 GIGSLYGTLRADPWTGVTLANGLSPREGADAVNAIQRYAMEHSRLGIPILFGEECSHGHM 120 Query: 120 AIGATVFPVPLSLGSAWNVDLYREMCRAVALETRSQGGTVTYSPVLDVVRDPRWGRTEEC 179 AIGATVFPVPL++GS WN +L+R + RAVA ETR+QGG+ TYSPVLDVVRDPRWGRTEE Sbjct: 121 AIGATVFPVPLTIGSTWNTELFRSISRAVAAETRAQGGSATYSPVLDVVRDPRWGRTEET 180 Query: 180 FGEDAYLISEMAAASVEGLQGESLSSQESVGATLKHFVGYGSSEGGRNAGPVHMGWRELL 239 FGED +L++E A A+V+GLQGE L S S+ ATLKHF GYG+SEGGRN PVHMG REL Sbjct: 181 FGEDPHLVTEFAVAAVQGLQGERLDSHTSLLATLKHFAGYGASEGGRNGAPVHMGLRELH 240 Query: 240 EVDLLPFKKAVEAGAVSIMPAYNEIDGVPCTTNTALMEDILRGAWGFDGLVITDCGAIEM 299 EVDLLPF+KAVEAGA+S+M AYNEIDGVPCT++ L++D+LR AWGFDG VITDCGAI M Sbjct: 241 EVDLLPFRKAVEAGALSVMTAYNEIDGVPCTSSGYLLQDVLREAWGFDGFVITDCGAIHM 300 Query: 300 LAAGHDVAEDGLDASVQAISSGIDMEMSGAMFGKHLVNAVRTGKLAEGILDRAVQRVLEL 359 LA GH+ A G++A+ Q++ +G+DMEMSG MF HL A+ G + E L+RA RVLEL Sbjct: 301 LACGHNTAGSGVEAAAQSLKAGVDMEMSGTMFRAHLHQALEQGLITEEDLNRAAGRVLEL 360 Query: 360 KFKLGLFEQPYADPDAAEQFIGSVKHRELARRLAAESIILLKNE 403 KF+LGLF++PY DP AEQ IG +H LA + AAE I+LLKNE Sbjct: 361 KFRLGLFDRPYVDPAWAEQVIGCKEHIALAYQAAAEGIVLLKNE 404 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/332 (70%), Positives = 268/332 (80%) Query: 490 VAVIGPNADAPYNQLGDYTSPQQRSSIVTVLDGVRSKLGAERVLYAPGCRIKGDSREGFE 549 +AVIGPNA APY+QLGDYTSPQ IVTVLDG+R +LG RVLYAPGCRI+GDSREGF Sbjct: 417 IAVIGPNAHAPYHQLGDYTSPQPPGQIVTVLDGIRRRLGDSRVLYAPGCRIQGDSREGFP 476 Query: 550 AALACAEQADTVVMVLGGSSARDFGEGTIDLKTGASKVTEHSWSDMDCGEGIDRISLALS 609 ALACAEQAD +VMVLGGSSARDFGEGTIDL+TGAS VT H+ SDM+CGEGIDR +L L Sbjct: 477 RALACAEQADVIVMVLGGSSARDFGEGTIDLRTGASVVTGHAESDMECGEGIDRSTLTLM 536 Query: 610 GVQLELAQEIHKLGKPLVVVYINGRPVSEPWIEEHAHAILEAWYPGQEGGHAVADILFGD 669 GVQLEL QE+HKLGKP++VVYINGRP++EPWI+EH +I+EAWYPGQEGG A+AD+LFGD Sbjct: 537 GVQLELLQELHKLGKPVIVVYINGRPITEPWIDEHIPSIVEAWYPGQEGGSAIADMLFGD 596 Query: 670 VNPSGRLTISWPKDAGQLPVYYNGKRSRGKRYLEADSQPRYPFGFGLSYTSFSYSELKVE 729 +NPSGRL +S PK+ GQLP YN +R+RGKRYLE D PRYPFGFGLSYT F Y L VE Sbjct: 597 INPSGRLPLSIPKEVGQLPNSYNARRTRGKRYLETDLAPRYPFGFGLSYTEFRYGRLTVE 656 Query: 730 PQAITADETATVTVRVENTGELTGAEVVQLYISDVASKVTRPAKELKGFRKITLSPGEAQ 789 P + ATV + V N G GAEVVQLY+SD+A+ VTRP K LKGFRK+ L GE Q Sbjct: 657 PAVVPIGGEATVRIDVTNAGARDGAEVVQLYVSDLAASVTRPEKALKGFRKVFLKAGETQ 716 Query: 790 IVEFEIGAEQLQYIGPDYQPVVEPGAFKILVG 821 V F IG+EQL+ IG D +PVVEPG F+I VG Sbjct: 717 EVTFTIGSEQLELIGLDLKPVVEPGEFRIQVG 748 >A6EIP6.1 A6EIP6_9SPHI Putative beta-glucosidase Length = 793 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 202/401 (50%), Positives = 268/401 (66%) Query: 3 YKDPSRPSAERAEHLLGLMTLEEKAAQLVQPFGWQAYEHTDGEITLTEDFKRQVAETGIG 62 YK+PS + ER + L+G MTLEEK QL GW Y T+ +I+ +E FK+ VAE G Sbjct: 33 YKNPSFSTEERVKDLIGRMTLEEKVGQLSTLLGWDMYTKTNNQISASETFKKAVAEQHTG 92 Query: 63 SLYGMLRADPWTGVTLASGLSPRQGAEAVNALQRYAIENSRLGIPILIGEECSHGHMAIG 122 L+ LRADPWT TL +GL+P Q A A NALQ+Y +E++RLGIP+L EEC HGHMAIG Sbjct: 93 LLWATLRADPWTKKTLLTGLNPMQSAMATNALQKYVMEHTRLGIPMLFSEECPHGHMAIG 152 Query: 123 ATVFPVPLSLGSAWNVDLYREMCRAVALETRSQGGTVTYSPVLDVVRDPRWGRTEECFGE 182 TVFP + S W+ L +EM A+A+ETR QGG + Y PVLD+ R+PRW R EE +GE Sbjct: 153 TTVFPTSIGQSSTWDPALIKEMAAAIAMETRLQGGHIGYGPVLDLAREPRWSRVEETYGE 212 Query: 183 DAYLISEMAAASVEGLQGESLSSQESVGATLKHFVGYGSSEGGRNAGPVHMGWRELLEVD 242 D L S M A V G QG ++ S ++ +TLKHF YG EGG N G V +G REL + Sbjct: 213 DPVLNSRMGEAMVSGFQGTNIGSGVNILSTLKHFTAYGVPEGGHNGGSVTVGNRELFQSY 272 Query: 243 LLPFKKAVEAGAVSIMPAYNEIDGVPCTTNTALMEDILRGAWGFDGLVITDCGAIEMLAA 302 L PFK AV+AGA+S+M AYN +DG+PC++N L+ DILRG WGF+G V++D +I L Sbjct: 273 LPPFKAAVKAGALSVMTAYNSVDGIPCSSNRYLLTDILRGQWGFNGFVVSDLNSISGLEG 332 Query: 303 GHDVAEDGLDASVQAISSGIDMEMSGAMFGKHLVNAVRTGKLAEGILDRAVQRVLELKFK 362 H VA +A+ A+++G+D ++SG +G LV AV G + +D A+ RVL LKF Sbjct: 333 NHHVASSATEAAALAMNAGLDADLSGYGYGPALVKAVNGGLVKMATVDTALARVLRLKFN 392 Query: 363 LGLFEQPYADPDAAEQFIGSVKHRELARRLAAESIILLKNE 403 +GLFE PY +P AE+ + + KH LAR++A ES++LLKNE Sbjct: 393 MGLFENPYVNPKQAEKQVMNAKHVTLARKVAQESVVLLKNE 433 Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 163/340 (47%), Positives = 221/340 (65%), Gaps = 1/340 (0%) Query: 489 KVAVIGPNADAPYNQLGDYTSPQQRSSIVTVLDGVRSKLGAER-VLYAPGCRIKGDSREG 547 +AVIGPNAD YNQLGDYT+PQ ++TVL+G+R+K+ E V Y GC I+ + G Sbjct: 445 NIAVIGPNADNVYNQLGDYTAPQADGKVITVLNGIRAKVSKETGVFYQKGCAIRDTASAG 504 Query: 548 FEAALACAEQADTVVMVLGGSSARDFGEGTIDLKTGASKVTEHSWSDMDCGEGIDRISLA 607 AA+A A ++D ++VLGGSSARDF + K + + SDM+ GEG DR +L Sbjct: 505 IAAAVALASKSDVAIVVLGGSSARDFKTEYQNTGAAEVKASAVAVSDMESGEGFDRSTLD 564 Query: 608 LSGVQLELAQEIHKLGKPLVVVYINGRPVSEPWIEEHAHAILEAWYPGQEGGHAVADILF 667 L G Q+EL + + K G P+VVV I GRP++ W E+ A+++AWYPGQEGG+A+AD+LF Sbjct: 565 LMGRQMELLRAVVKTGTPVVVVLIKGRPLTLNWAAENVAAMVDAWYPGQEGGNAIADVLF 624 Query: 668 GDVNPSGRLTISWPKDAGQLPVYYNGKRSRGKRYLEADSQPRYPFGFGLSYTSFSYSELK 727 GD NP+GRL++S PK GQLPVYYN KR Y+E D QP Y FG+GLSY++F YS LK Sbjct: 625 GDYNPAGRLSVSVPKSVGQLPVYYNKKRPLPHNYVELDEQPLYSFGYGLSYSTFEYSNLK 684 Query: 728 VEPQAITADETATVTVRVENTGELTGAEVVQLYISDVASKVTRPAKELKGFRKITLSPGE 787 D VT ++NTG G EVVQLY+ D S V P ++LK FR+++L G+ Sbjct: 685 TNVSGRGKDVRVQVTFDLKNTGSRDGDEVVQLYLRDEQSSVVTPMQQLKQFRRLSLKSGQ 744 Query: 788 AQIVEFEIGAEQLQYIGPDYQPVVEPGAFKILVGSHVNDV 827 Q + FE+ AE LQ + + VEPG F ++VG+ +D+ Sbjct: 745 QQQLSFELSAEDLQLMNQQMEWQVEPGDFSLMVGASSSDI 784 >Q5LH74.1 Q5LH74_BACFN Putative beta-glucosidase Length = 814 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/402 (48%), Positives = 267/402 (66%), Gaps = 1/402 (0%) Query: 2 TYKDPSRPSAERAEHLLGLMTLEEKAAQLVQPFGWQAYEHTDGEITLTEDFKRQVAETGI 61 TY++PS P R EHLL MTLEEK Q++ GW YE +I LT ++++ E I Sbjct: 48 TYENPSAPVEYRVEHLLSQMTLEEKVGQMLTSLGWPMYERVGEDIRLTPQLEKEIGEYHI 107 Query: 62 GSLYGMLRADPWTGVTLASGLSPRQGAEAVNALQRYAIENSRLGIPILIGEECSHGHMAI 121 GSL+G +RADPWT TL +GL+P A A N LQ Y IE+SRLGIP+ + EEC HGHMAI Sbjct: 108 GSLWGFMRADPWTQRTLHTGLNPSLAARASNRLQSYVIEHSRLGIPLFLAEECPHGHMAI 167 Query: 122 GATVFPVPLSLGSAWNVDLYREMCRAVALETRSQGGTVTYSPVLDVVRDPRWGRTEECFG 181 G TVFP + S WN +L R+M R +A+E +QG + Y PVLD+ RDPRW R EE +G Sbjct: 168 GTTVFPTSIGQASTWNPELIRQMGRVIAIEASAQGAHIGYGPVLDLARDPRWSRVEETYG 227 Query: 182 EDAYLISEMAAASVEGLQGESLSSQESVGATLKHFVGYGSSEGGRNAGPVHMGWRELLEV 241 ED YL M A V G QGE+L+ +SV ATLKHF YG +EGG N G H+G REL E Sbjct: 228 EDPYLNGVMGTALVRGFQGETLNDGKSVIATLKHFASYGWTEGGHNGGTAHIGERELEEA 287 Query: 242 DLLPFKKAVEAGAVSIMPAYNEIDGVPCTTNTALMEDILRGAWGFDGLVITDCGAIEMLA 301 PF++AV AGA+S+M +YNEIDG PCT + L+ DIL+ W F G V++D A+ L Sbjct: 288 IFPPFREAVGAGALSVMSSYNEIDGNPCTGSRYLLTDILKDRWQFKGFVVSDLYAVGGLR 347 Query: 302 AGHDVAEDGLDASVQAISSGIDMEMSGAMFGKHLVNAVRTGKLAEGILDRAVQRVLELKF 361 H VA + +A+++A+++G+D ++ ++ + LV AV+ G +A +D+AV+R+L LKF Sbjct: 348 E-HGVAGNDYEAAIKAVNAGVDSDLGTNVYAEQLVAAVKRGDVAVATIDKAVRRILSLKF 406 Query: 362 KLGLFEQPYADPDAAEQFIGSVKHRELARRLAAESIILLKNE 403 ++GLF+ P+ D A Q + S +H LAR +A +SI+LLKN+ Sbjct: 407 QMGLFDDPFVDEKQAVQLVASSEHTGLAREVARQSIVLLKNK 448 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 177/340 (52%), Positives = 230/340 (67%), Gaps = 4/340 (1%) Query: 490 VAVIGPNADAPYNQLGDYTSPQQRSSIVTVLDGVRSKLGAE-RVLYAPGCRIKGDSREGF 548 +AVIGPNAD YN LGDYT+PQ ++VTVLDG+R K+ E RVLYA GC ++ SR GF Sbjct: 461 LAVIGPNADNVYNMLGDYTAPQADGTVVTVLDGIRQKVSKETRVLYAKGCTVRDSSRTGF 520 Query: 549 EAALACAEQADTVVMVLGGSSARDFGEGTIDLKTGASKVTEHSWSDMDCGEGIDRISLAL 608 + A+ A AD VVMV+GGSSARDF + TGA+KVT + SDM+ GEG DR +L L Sbjct: 521 KDAIETARNADAVVMVMGGSSARDFSSEYEE--TGAAKVTINQISDMESGEGYDRATLHL 578 Query: 609 SGVQLELAQEIHKLGKPLVVVYINGRPVSEPWIEEHAHAILEAWYPGQEGGHAVADILFG 668 G QLEL +EI +LGKP+V+V I GRP+ + A AI++AWYPG +GG+AVAD+LFG Sbjct: 579 MGRQLELLEEISRLGKPVVLVLIKGRPLLMEGAIQEAEAIVDAWYPGMQGGNAVADVLFG 638 Query: 669 DVNPSGRLTISWPKDAGQLPVYYNGKRSRGK-RYLEADSQPRYPFGFGLSYTSFSYSELK 727 D NP+GRLT+S P+ GQLPVYYN +R + RY+E PRYPFG+GLSYT+FSY+++K Sbjct: 639 DYNPAGRLTLSVPRSVGQLPVYYNTRRKGNRSRYIEEPGTPRYPFGYGLSYTTFSYTDMK 698 Query: 728 VEPQAITADETATVTVRVENTGELTGAEVVQLYISDVASKVTRPAKELKGFRKITLSPGE 787 V+ + D VTV ++N G G EV QLY D S T PAK+L+ F +I L GE Sbjct: 699 VQVTEGSDDCRVDVTVTIQNQGTADGDEVAQLYFRDDVSSFTTPAKQLRAFSRIHLKAGE 758 Query: 788 AQIVEFEIGAEQLQYIGPDYQPVVEPGAFKILVGSHVNDV 827 ++ V F + + L + + VVEPG F I+VG D+ Sbjct: 759 SREVTFTLDKKSLALYMQEGEWVVEPGRFTIMVGGSSEDI 798 >Q64Y34.1 Q64Y34_BACFR Periplasmic beta-glucosidase Length = 812 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/402 (48%), Positives = 267/402 (66%), Gaps = 1/402 (0%) Query: 2 TYKDPSRPSAERAEHLLGLMTLEEKAAQLVQPFGWQAYEHTDGEITLTEDFKRQVAETGI 61 TY++PS P R EHLL MTLEEK Q++ GW YE +I LT ++++ E I Sbjct: 48 TYENPSAPVEYRVEHLLSQMTLEEKVGQMLTSLGWPMYERVGEDIRLTPQLEKEIGEYHI 107 Query: 62 GSLYGMLRADPWTGVTLASGLSPRQGAEAVNALQRYAIENSRLGIPILIGEECSHGHMAI 121 GSL+G +RADPWT TL +GL+P A A N LQ Y IE+SRLGIP+ + EEC HGHMAI Sbjct: 108 GSLWGFMRADPWTQRTLHTGLNPSLAARASNRLQSYVIEHSRLGIPLFLAEECPHGHMAI 167 Query: 122 GATVFPVPLSLGSAWNVDLYREMCRAVALETRSQGGTVTYSPVLDVVRDPRWGRTEECFG 181 G TVFP + S WN +L R+M R +A+E +QG + Y PVLD+ RDPRW R EE +G Sbjct: 168 GTTVFPTSIGQASTWNPELIRQMGRVIAIEASAQGAHIGYGPVLDLARDPRWSRVEETYG 227 Query: 182 EDAYLISEMAAASVEGLQGESLSSQESVGATLKHFVGYGSSEGGRNAGPVHMGWRELLEV 241 ED YL M A V G QGE+L+ +SV ATLKHF YG +EGG N G H+G REL E Sbjct: 228 EDPYLNGVMGTALVRGFQGETLNDGKSVIATLKHFASYGWTEGGHNGGTAHIGERELEEA 287 Query: 242 DLLPFKKAVEAGAVSIMPAYNEIDGVPCTTNTALMEDILRGAWGFDGLVITDCGAIEMLA 301 PF++AV AGA+S+M +YNEIDG PCT + L+ DIL+ W F G V++D A+ L Sbjct: 288 IFPPFREAVGAGALSVMSSYNEIDGNPCTGSRYLLTDILKDRWQFKGFVVSDLYAVGGLR 347 Query: 302 AGHDVAEDGLDASVQAISSGIDMEMSGAMFGKHLVNAVRTGKLAEGILDRAVQRVLELKF 361 H VA + +A+++A+++G+D ++ ++ + LV AV+ G +A +D+AV+R+L LKF Sbjct: 348 E-HGVAGNDYEAAIKAVNAGVDSDLGTNVYAEQLVAAVKRGDVAVATIDKAVRRILSLKF 406 Query: 362 KLGLFEQPYADPDAAEQFIGSVKHRELARRLAAESIILLKNE 403 ++GLF+ P+ D A Q + S +H LAR +A +SI+LLKN+ Sbjct: 407 QMGLFDDPFVDEKQAVQLVASSEHTGLAREVARQSIVLLKNK 448 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 177/340 (52%), Positives = 228/340 (67%), Gaps = 6/340 (1%) Query: 490 VAVIGPNADAPYNQLGDYTSPQQRSSIVTVLDGVRSKLGAE-RVLYAPGCRIKGDSREGF 548 +AVIGPNAD YN LGDYT+PQ ++VTVLDG+R K+ E RVLYA GC ++ SR GF Sbjct: 461 LAVIGPNADNVYNMLGDYTAPQADGTVVTVLDGIRQKVSKETRVLYAKGCAVRDSSRTGF 520 Query: 549 EAALACAEQADTVVMVLGGSSARDFGEGTIDLKTGASKVTEHSWSDMDCGEGIDRISLAL 608 + A+ A AD VVMV+GGSSARDF + TGA+KVT + SDM+ GEG DR +L L Sbjct: 521 KDAIETARNADAVVMVMGGSSARDFSSEYEE--TGAAKVTINQISDMESGEGYDRATLHL 578 Query: 609 SGVQLELAQEIHKLGKPLVVVYINGRPVSEPWIEEHAHAILEAWYPGQEGGHAVADILFG 668 G QLEL +EI +LGKP VV I GRP+ + A AI++AWYPG +GG+AVAD+LFG Sbjct: 579 MGRQLELLEEISRLGKP--VVLIKGRPLLMEGAIQEAEAIVDAWYPGMQGGNAVADVLFG 636 Query: 669 DVNPSGRLTISWPKDAGQLPVYYNGKRSRGK-RYLEADSQPRYPFGFGLSYTSFSYSELK 727 D NP+GRLT+S P+ GQLPVYYN +R + RY+E PRYPFG+GLSYT+FSY+++K Sbjct: 637 DYNPAGRLTLSVPRSVGQLPVYYNTRRKGNRSRYVEEPGTPRYPFGYGLSYTTFSYTDMK 696 Query: 728 VEPQAITADETATVTVRVENTGELTGAEVVQLYISDVASKVTRPAKELKGFRKITLSPGE 787 V+ + D VTV ++N G G EV QLY D S T PAK+L+ F +I L GE Sbjct: 697 VQVTEGSDDCWVDVTVTIQNQGTADGDEVAQLYFRDDVSSFTTPAKQLRAFSRIHLKAGE 756 Query: 788 AQIVEFEIGAEQLQYIGPDYQPVVEPGAFKILVGSHVNDV 827 ++ V F + + L + + VVEPG F I+VG D+ Sbjct: 757 SREVTFTLDKKSLALYMQEGEWVVEPGRFTIMVGGSSEDI 796 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,539,783,760 Number of extensions: 192648804 Number of successful extensions: 489634 Number of sequences better than 1.0e-05: 2721 Number of HSP's gapped: 478348 Number of HSP's successfully gapped: 4510 Length of query: 842 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 697 Effective length of database: 1,694,649,028 Effective search space: 1181170372516 Effective search space used: 1181170372516 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 136 (57.0 bits)