BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0074.0001.p
         (123 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5KJ83.1 A5KJ83_9FIRM Putative uncharacterized protein                155   1e-36
B8G1C0.1 B8G1C0_DESHD ABC transporter related                         154   3e-36
C0C0Q1.1 C0C0Q1_9CLOT Putative uncharacterized protein                149   8e-35
C3L1N4.1 C3L1N4_CLOB6 ABC Transporter, ATP-binding protein            146   5e-34
B1QLQ3.1 B1QLQ3_CLOBO ABC Transporter, ATP-binding protein            146   5e-34

>A5KJ83.1 A5KJ83_9FIRM Putative uncharacterized protein
          Length = 240

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/109 (68%), Positives = 89/109 (81%)

Query: 11  VKLLSGGERQRLAVLLALIPEPKLVFLDELTTGLDTKARRMLWKQLVTMKESGLAIVLTS 70
           VK LSGGERQRL ++LALIP PKLVFLDELTTGLDTKARR +WK L  +K++GL I LTS
Sbjct: 128 VKNLSGGERQRLFIVLALIPNPKLVFLDELTTGLDTKARRDVWKILSELKDNGLTIFLTS 187

Query: 71  HYMDEVEALCDEILILREGQTVFHGTIQEALAASGKTTLEDAYLHFAGE 119
           H+MDEVEALCDEI IL++G+ VF+GT+++A  ASG    EDAYL   GE
Sbjct: 188 HFMDEVEALCDEICILKKGKAVFYGTVEQAKKASGCEKFEDAYLMLFGE 236


>B8G1C0.1 B8G1C0_DESHD ABC transporter related
          Length = 247

 Score =  154 bits (388), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/118 (59%), Positives = 96/118 (81%)

Query: 3   MSDLLQLMVKLLSGGERQRLAVLLALIPEPKLVFLDELTTGLDTKARRMLWKQLVTMKES 62
           +SD L+ +V  LSGG++QRL ++LALIP P+++FLDELTTGLD KARR +WK L  ++  
Sbjct: 120 LSDKLKSLVSELSGGQKQRLFIVLALIPNPEVIFLDELTTGLDAKARRDVWKSLSELRAK 179

Query: 63  GLAIVLTSHYMDEVEALCDEILILREGQTVFHGTIQEALAASGKTTLEDAYLHFAGEE 120
           G+ I+LTSH+MDEVEALCD+I+IL++G++VF+GT+QEA+AAS     EDAYL +  EE
Sbjct: 180 GITILLTSHFMDEVEALCDKIMILKKGKSVFYGTVQEAIAASPYQKFEDAYLWYTDEE 237


>C0C0Q1.1 C0C0Q1_9CLOT Putative uncharacterized protein
          Length = 257

 Score =  149 bits (376), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 91/119 (76%)

Query: 3   MSDLLQLMVKLLSGGERQRLAVLLALIPEPKLVFLDELTTGLDTKARRMLWKQLVTMKES 62
           ++D  + +VK LSGG+RQRL ++LALIP+P +VFLDELTTGLD KARR +W  L  +K+ 
Sbjct: 133 IADKKKSLVKDLSGGQRQRLFIVLALIPDPDVVFLDELTTGLDAKARREVWNILSGLKKR 192

Query: 63  GLAIVLTSHYMDEVEALCDEILILREGQTVFHGTIQEALAASGKTTLEDAYLHFAGEED 121
           GL I LTSH+MDEVEALCD I IL+EG++VF+GT+ EA+  S     EDAYL +  EED
Sbjct: 193 GLTIFLTSHFMDEVEALCDRICILKEGKSVFYGTVSEAVEKSPYGKFEDAYLWYTNEED 251


>C3L1N4.1 C3L1N4_CLOB6 ABC Transporter, ATP-binding protein
          Length = 243

 Score =  146 bits (369), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 91/121 (75%)

Query: 1   MDMSDLLQLMVKLLSGGERQRLAVLLALIPEPKLVFLDELTTGLDTKARRMLWKQLVTMK 60
            D+ D ++ +V  LSGGE+QRL ++LALIP P++VFLDELTTGLD KARR +WK L+ +K
Sbjct: 117 FDLQDKVRNLVSELSGGEKQRLFIILALIPNPEVVFLDELTTGLDVKARRDVWKCLLNLK 176

Query: 61  ESGLAIVLTSHYMDEVEALCDEILILREGQTVFHGTIQEALAASGKTTLEDAYLHFAGEE 120
           + GL I LTSH+MDEVE LCD+I IL+ G   F+GT++EA+A S     +DAYL F  EE
Sbjct: 177 KQGLTIFLTSHFMDEVEVLCDKICILKNGVMDFYGTVEEAVAVSPYEKFDDAYLWFVDEE 236

Query: 121 D 121
           +
Sbjct: 237 E 237


>B1QLQ3.1 B1QLQ3_CLOBO ABC Transporter, ATP-binding protein
          Length = 243

 Score =  146 bits (369), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 91/121 (75%)

Query: 1   MDMSDLLQLMVKLLSGGERQRLAVLLALIPEPKLVFLDELTTGLDTKARRMLWKQLVTMK 60
            D+ D ++ +V  LSGGE+QRL ++LALIP P++VFLDELTTGLD KARR +WK L+ +K
Sbjct: 117 FDLQDKVRNLVSELSGGEKQRLFIILALIPNPEVVFLDELTTGLDVKARRDVWKCLLNLK 176

Query: 61  ESGLAIVLTSHYMDEVEALCDEILILREGQTVFHGTIQEALAASGKTTLEDAYLHFAGEE 120
           + GL I LTSH+MDEVE LCD+I IL+ G   F+GT++EA+A S     +DAYL F  EE
Sbjct: 177 KQGLTIFLTSHFMDEVEVLCDKICILKNGVMDFYGTVEEAVAVSPYEKFDDAYLWFVDEE 236

Query: 121 D 121
           +
Sbjct: 237 E 237


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 672,563,382
Number of extensions: 23404366
Number of successful extensions: 215093
Number of sequences better than 1.0e-05: 34059
Number of HSP's gapped: 229649
Number of HSP's successfully gapped: 36205
Length of query: 123
Length of database: 3,060,696,203
Length adjustment: 89
Effective length of query: 34
Effective length of database: 2,222,225,868
Effective search space: 75555679512
Effective search space used: 75555679512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)