BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0073.0011.p (583 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D7X0.1 B1D7X0_9BACL Extracellular solute-binding protein family 1 753 0.0 B1DGY5.1 B1DGY5_9BACL Putative uncharacterized protein 723 0.0 B3KDQ5.1 B3KDQ5_9BACI Extracellular solute-binding protein family 1 609 e-172 B3KJH7.1 B3KJH7_9BACI Extracellular solute-binding protein family 1 598 e-169 Q9KBL3.1 Q9KBL3_BACHD BH1913 protein 568 e-160 >B1D7X0.1 B1D7X0_9BACL Extracellular solute-binding protein family 1 Length = 575 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/521 (68%), Positives = 425/521 (81%) Query: 61 DLSPLTLSFFAEDPNPNWNNMKDDISKVITEKTGVTLDAEFAVGDPQQKIALIAAGGEYP 120 D SPLTL++++EDP+PNW NM+D+I K +TEKTG+TLDAEFAVGD QK +LIAA GEYP Sbjct: 54 DTSPLTLTYYSEDPSPNWANMQDEIGKSLTEKTGITLDAEFAVGDAVQKSSLIAASGEYP 113 Query: 121 DIISAKADIGKLVDAGAVIDLTELIDKYAPNIKRVLGDNLARAKYTNEDQSIYAIPTWAA 180 D+ISAK I K VDAGAV+DLT+LIDKYAP++K++ N++R +Y+++D +IY IP++ Sbjct: 114 DLISAKQSIAKFVDAGAVLDLTDLIDKYAPHLKKLFEGNMSRLRYSDDDHAIYVIPSYNG 173 Query: 181 MNEKKFVAGGGFELQHRVVKEAGYPEIRTVADYEKVIKDYLEKHPTDENGNKNIGLSLNA 240 + ++ F AGGGFELQHRVVKE GYP+IRTVADYEK IKDYL HP DENGN NIGL+LNA Sbjct: 174 IGQQYFNAGGGFELQHRVVKELGYPQIRTVADYEKAIKDYLALHPKDENGNPNIGLTLNA 233 Query: 241 DDWHMYISVTNPAVATTGGSDDGEYYINQETHEAMYHFRRPEEKEYFRWLNHMNDIGLLD 300 DDWHMYISVTNPA TGGSDDGE+ I+ +T + YHFRRPEEK+YF+WLNHMN GLLD Sbjct: 234 DDWHMYISVTNPAFFATGGSDDGEFNIDIDTQKVTYHFRRPEEKDYFKWLNHMNAEGLLD 293 Query: 301 KESFVQKYDQYKAKVATGRVLGLIDQDWDYNDAQQALKTAGKFDQTYGHYPVTLTKEYKE 360 ESFVQKYDQYKAKVA+GRVLGLIDQDWDY D ++ALK AGKFDQ YGHYPVT++ + KE Sbjct: 294 PESFVQKYDQYKAKVASGRVLGLIDQDWDYGDGEKALKAAGKFDQGYGHYPVTMSADVKE 353 Query: 361 TSFWPTGFMGGYGISISSTNPDPVRTIKFLDYLASDEGQILNNWGIEGKHYTVENGKRVV 420 SFWPTGFMGG G++IS NPDPVRTIKFLDYLASDEGQ+L NWGIEGK Y V +GKRV+ Sbjct: 354 ASFWPTGFMGGSGVAISKDNPDPVRTIKFLDYLASDEGQVLVNWGIEGKQYNVVDGKRVI 413 Query: 421 INEVQDRINNDNTAFTKESGLGFYWNIMVHYGDGAKDSTGNYYTRNFPEQLVLGYSDVEK 480 +V +R ND FTKE+G+G Y + HYGDG KD +GNYYT +FPEQ+V G++DVEK Sbjct: 414 PEDVNNRKINDAVNFTKETGIGLYNLLSGHYGDGVKDPSGNYYTTSFPEQIVAGFNDVEK 473 Query: 481 ETLAAYKATTWKDLFPKEEEFKEKAYGAAWNIAIPGEDEVSILGNKMRDITWKRIPQAIL 540 ETL AY ATTWKDLFPKEEEFK K +GAAWNI +PG+ E ++ K+ DITWKRIP+AIL Sbjct: 474 ETLKAYGATTWKDLFPKEEEFKVKPWGAAWNIPVPGDSEAVVIEKKLTDITWKRIPEAIL 533 Query: 541 AKPADFDKIWEDYMADLDKAGVEKMEKGYTKYVQDRVALWT 581 AKP DFDKIW+ Y +L KA VEK EK V+ RV LW+ Sbjct: 534 AKPEDFDKIWDAYQQELVKANVEKAEKIREDLVKARVKLWS 574 >B1DGY5.1 B1DGY5_9BACL Putative uncharacterized protein Length = 502 Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/501 (67%), Positives = 415/501 (82%) Query: 81 MKDDISKVITEKTGVTLDAEFAVGDPQQKIALIAAGGEYPDIISAKADIGKLVDAGAVID 140 M+DD+ K IT++TGVTLDAEFAVGDP QK+ALIA G+YPD+IS K D+ K+VDAGA++D Sbjct: 1 MQDDVGKEITKQTGVTLDAEFAVGDPSQKVALIATSGDYPDLISPKGDLNKMVDAGAMLD 60 Query: 141 LTELIDKYAPNIKRVLGDNLARAKYTNEDQSIYAIPTWAAMNEKKFVAGGGFELQHRVVK 200 LT+LI+KYAPN+K++ GD + R +Y+N+D SIY IPT++A++ + FVAGGGFELQHR VK Sbjct: 61 LTDLIEKYAPNLKKLFGDQINRLRYSNDDPSIYVIPTYSAVDGQTFVAGGGFELQHRAVK 120 Query: 201 EAGYPEIRTVADYEKVIKDYLEKHPTDENGNKNIGLSLNADDWHMYISVTNPAVATTGGS 260 EAGYPEI+T+ DYE VIK Y+EKHPTDENGNKNIGL+LN DDWH YISVTNPA TTG S Sbjct: 121 EAGYPEIKTLQDYENVIKSYIEKHPTDENGNKNIGLTLNGDDWHTYISVTNPAAETTGKS 180 Query: 261 DDGEYYINQETHEAMYHFRRPEEKEYFRWLNHMNDIGLLDKESFVQKYDQYKAKVATGRV 320 DGEYYI+ +T+EA YH+R EKEYF WLNHM +IGLLDKESFV+K DQY AKVA+GRV Sbjct: 181 GDGEYYIDPKTNEATYHYRTEGEKEYFEWLNHMYNIGLLDKESFVEKNDQYLAKVASGRV 240 Query: 321 LGLIDQDWDYNDAQQALKTAGKFDQTYGHYPVTLTKEYKETSFWPTGFMGGYGISISSTN 380 +GLID DW Y D +++LK K DQTYGHY V L+ YK+ F TGFM G+GI I+++ Sbjct: 241 IGLIDADWGYADGEKSLKADNKLDQTYGHYSVMLSDAYKDNRFQSTGFMAGWGIGITTSC 300 Query: 381 PDPVRTIKFLDYLASDEGQILNNWGIEGKHYTVENGKRVVINEVQDRINNDNTAFTKESG 440 DPVR IKFLDYLAS++ Q+LNNWGIEGK YT+++GKRVV +VQ+RI NDNTAF++ESG Sbjct: 301 KDPVRAIKFLDYLASEQAQVLNNWGIEGKQYTLQDGKRVVPEDVQNRIINDNTAFSQESG 360 Query: 441 LGFYWNIMVHYGDGAKDSTGNYYTRNFPEQLVLGYSDVEKETLAAYKATTWKDLFPKEEE 500 +GFY NI HYGDG KDS GNYYT+NFPEQ+V Y+ +KETL AY A TWKDLFP+E++ Sbjct: 361 VGFYSNIGAHYGDGVKDSAGNYYTKNFPEQIVSTYTSADKETLKAYNAATWKDLFPQEDQ 420 Query: 501 FKEKAYGAAWNIAIPGEDEVSILGNKMRDITWKRIPQAILAKPADFDKIWEDYMADLDKA 560 F KA+GAAWNI +PG+DEV+IL NKM+DITWK+IP+ ++AKP DF K+W+ Y +L A Sbjct: 421 FPVKAWGAAWNITVPGDDEVTILTNKMKDITWKQIPRIVMAKPEDFAKMWDGYQKELLDA 480 Query: 561 GVEKMEKGYTKYVQDRVALWT 581 GVEKMEKG+TKYVQDRV LW+ Sbjct: 481 GVEKMEKGFTKYVQDRVKLWS 501 >B3KDQ5.1 B3KDQ5_9BACI Extracellular solute-binding protein family 1 Length = 570 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 286/521 (54%), Positives = 390/521 (74%), Gaps = 1/521 (0%) Query: 62 LSPLTLSFFAEDPNPNWNNMKDDISKVITEKTGVTLDAEFAVGDPQQKIALIAAGGEYPD 121 L P+T+++++ D N NW NM+D + K +TEKTG+T+ AE+AV QK+ L+ A GEYPD Sbjct: 51 LEPITMTYYSADSNANWANMQDAVGKKLTEKTGITIQAEYAVDGSNQKLPLMVASGEYPD 110 Query: 122 IISAKADIGKLVDAGAVIDLTELIDKYAPNIKRVLGDNLARAKYTNEDQSIYAIPTWAAM 181 ++ AK D VD+GA IDLT+LI+++APNIK+V G+ ++R K++NED++IY +PT AA+ Sbjct: 111 LVFAKGDANLFVDSGAFIDLTDLIEEHAPNIKKVYGEYMSRLKWSNEDEAIYVLPTLAAV 170 Query: 182 NEKKFVAGGGFELQHRVVKEAGYPEIRTVADYEKVIKDYLEKHPTDENGNKNIGLSLNAD 241 + + AGG F++QH V+KE GYPE++TV DYEK +KDY EKHPT +G I L+LNAD Sbjct: 171 DHQALDAGGTFQIQHEVLKELGYPELKTVKDYEKALKDYAEKHPTI-DGQPTIPLTLNAD 229 Query: 242 DWHMYISVTNPAVATTGGSDDGEYYINQETHEAMYHFRRPEEKEYFRWLNHMNDIGLLDK 301 W + ISVTNPA TG SDDGEYYI+ ET EA H++RPEEKEYFRWLNHMN GLLDK Sbjct: 230 GWRIMISVTNPAFIATGVSDDGEYYIDPETTEAKLHYKRPEEKEYFRWLNHMNAEGLLDK 289 Query: 302 ESFVQKYDQYKAKVATGRVLGLIDQDWDYNDAQQALKTAGKFDQTYGHYPVTLTKEYKET 361 E+FVQK DQY+AK+++GRVLG+IDQ+W + +A AL+TAGK ++TY +P+ L + K+ Sbjct: 290 ETFVQKTDQYEAKISSGRVLGVIDQEWGFGNATNALRTAGKENRTYARFPIQLDESTKDA 349 Query: 362 SFWPTGFMGGYGISISSTNPDPVRTIKFLDYLASDEGQILNNWGIEGKHYTVENGKRVVI 421 +F TG++ G+G+ I+++ DPVR IKFLDYLAS+EGQ+L NWGIEG+HY V +GKRV+ Sbjct: 350 TFQDTGYVAGWGVGITTSAKDPVRIIKFLDYLASEEGQVLMNWGIEGEHYNVVDGKRVIP 409 Query: 422 NEVQDRINNDNTAFTKESGLGFYWNIMVHYGDGAKDSTGNYYTRNFPEQLVLGYSDVEKE 481 +VQ+R DN FTKE+G+G Y + YGDG KDST NYYT NFPE ++ Y+ KE Sbjct: 410 EDVQERKTYDNANFTKETGIGLYNAMFPRYGDGVKDSTDNYYTTNFPETIIENYTPAAKE 469 Query: 482 TLAAYKATTWKDLFPKEEEFKEKAYGAAWNIAIPGEDEVSILGNKMRDITWKRIPQAILA 541 TL AY A WKDL+PK+EEF K +G A+NI +P + ++I K+ +IT KRIP+ ILA Sbjct: 470 TLKAYGAEMWKDLWPKQEEFDVKPWGVAYNIPVPSDSNINITYKKVEEITRKRIPEVILA 529 Query: 542 KPADFDKIWEDYMADLDKAGVEKMEKGYTKYVQDRVALWTN 582 PA FD +++ ++ +L+ AG EKME+ YT+ V++RV LW N Sbjct: 530 DPAKFDALYDQFIKELNDAGAEKMEQEYTQLVRERVELWNN 570 >B3KJH7.1 B3KJH7_9BACI Extracellular solute-binding protein family 1 Length = 559 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 284/522 (54%), Positives = 384/522 (73%), Gaps = 1/522 (0%) Query: 61 DLSPLTLSFFAEDPNPNWNNMKDDISKVITEKTGVTLDAEFAVGDPQQKIALIAAGGEYP 120 DL P+T+++F+ D N NW +M+D + K +TE TGVT+ AEFAV QK+ L+ A GEYP Sbjct: 39 DLKPVTITYFSADSNANWASMQDAVGKKLTETTGVTIQAEFAVDGSNQKLPLMVASGEYP 98 Query: 121 DIISAKADIGKLVDAGAVIDLTELIDKYAPNIKRVLGDNLARAKYTNEDQSIYAIPTWAA 180 D++ AK D VD+GA IDLT+LI+++APN+K++ GD + R K++NED+SIY +PT A Sbjct: 99 DLVFAKGDANLFVDSGAFIDLTDLIEEHAPNLKKLYGDYMNRLKWSNEDESIYVLPTLNA 158 Query: 181 MNEKKFVAGGGFELQHRVVKEAGYPEIRTVADYEKVIKDYLEKHPTDENGNKNIGLSLNA 240 ++ ++ AGG F +QH V+KE GYPEI+TV D+EK +KDY EKHPT + G I L+LNA Sbjct: 159 VDHQQLDAGGNFHIQHEVLKELGYPEIKTVKDFEKALKDYYEKHPTID-GQPTIPLTLNA 217 Query: 241 DDWHMYISVTNPAVATTGGSDDGEYYINQETHEAMYHFRRPEEKEYFRWLNHMNDIGLLD 300 D W ISVT+ AV TG S DGEYY++ ET+EA H+RRPE+KEYFRWLNH+N G+LD Sbjct: 218 DGWRFMISVTDAAVIATGLSGDGEYYVDPETYEAKLHYRRPEDKEYFRWLNHLNATGILD 277 Query: 301 KESFVQKYDQYKAKVATGRVLGLIDQDWDYNDAQQALKTAGKFDQTYGHYPVTLTKEYKE 360 E+FVQK DQY+AK+A+GRVLG+ID DW + + AL+TAGK ++TY +P+ L + K+ Sbjct: 278 NETFVQKTDQYEAKIASGRVLGVIDADWGFGNPTNALRTAGKENRTYARFPIQLDETTKD 337 Query: 361 TSFWPTGFMGGYGISISSTNPDPVRTIKFLDYLASDEGQILNNWGIEGKHYTVENGKRVV 420 SF G+ G+G+ I+++ DPVR IKFLDYLAS+EGQIL NWGIEG+HY V++GKRV+ Sbjct: 338 ASFQNAGYAAGWGVGITTSAKDPVRIIKFLDYLASEEGQILMNWGIEGEHYNVKDGKRVI 397 Query: 421 INEVQDRINNDNTAFTKESGLGFYWNIMVHYGDGAKDSTGNYYTRNFPEQLVLGYSDVEK 480 +VQDR NDN +FTKESG+G Y ++ YGDG KDSTGNYYT NFPEQ+ Y+ K Sbjct: 398 PEDVQDRKVNDNASFTKESGIGLYNSLFPRYGDGVKDSTGNYYTTNFPEQIKANYAPSAK 457 Query: 481 ETLAAYKATTWKDLFPKEEEFKEKAYGAAWNIAIPGEDEVSILGNKMRDITWKRIPQAIL 540 ETL AY A WKD +PK EEF K +GAA+ I+ P + ++I ++ +I KRIP+ IL Sbjct: 458 ETLQAYGAEMWKDFWPKSEEFPTKPWGAAYLISPPIDSNIAITYKRVEEIVRKRIPEIIL 517 Query: 541 AKPADFDKIWEDYMADLDKAGVEKMEKGYTKYVQDRVALWTN 582 A P+ FD +++ ++ DL+ AG EKME+ Y++ V+DRV LW N Sbjct: 518 ADPSQFDALYDQFIQDLNAAGAEKMEQEYSELVRDRVELWNN 559 >Q9KBL3.1 Q9KBL3_BACHD BH1913 protein Length = 551 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/517 (53%), Positives = 371/517 (71%), Gaps = 3/517 (0%) Query: 64 PLTLSFFAEDPNPNWNNMKDDISKVITEKTGVTLDAEFAVGDPQQKIALIAAGGEYPDII 123 P+T + F+ DP+ W+NM+ +++ I E TGVTL+ EF V QKI+L+AA G+YPD+I Sbjct: 37 PVTFTLFSADPHTQWDNMESSVNQKIVEATGVTLEGEFDVNGGDQKISLMAASGDYPDLI 96 Query: 124 SAKADIGKLVDAGAVIDLTELIDKYAPNIKRVLGDNLARAKYTNEDQSIYAIPTWAAMNE 183 K + LVDAGA+IDLT+LI+++APN+K++ GD R K++ ED SIY +PT A ++ Sbjct: 97 WPKGNSNILVDAGALIDLTDLIEEHAPNLKKIYGDYFDRLKWSTEDPSIYILPT-AEVDH 155 Query: 184 KKFVAGGGFELQHRVVKEAGYPEIRTVADYEKVIKDYLEKHPTDENGNKNIGLSLNADDW 243 + G GF LQH VVKE GYP+IRTV D+E+ I+DY EK+P + +G IGLSL ADDW Sbjct: 156 TYWEPGHGFMLQHDVVKELGYPDIRTVYDFEQAIRDYKEKYP-EIDGQPTIGLSLLADDW 214 Query: 244 HMYISVTNPAVATTGGSDDGEYYINQETHEAMYHFRRPEEKEYFRWLNHMNDIGLLDKES 303 + IS TNPA+ TG SDDGEYYI+ +T+EA H+RRPEEK+YFRWLNHMND GLLD ES Sbjct: 215 RILISTTNPALYVTGVSDDGEYYIDPDTYEATLHYRRPEEKDYFRWLNHMNDSGLLDPES 274 Query: 304 FVQKYDQYKAKVATGRVLGLIDQDWDYNDAQQALKTAGKFDQTYGHYPVTLTKEYKETSF 363 FVQ YDQY AK+++GRVL ID +W +AQ+AL+ GK ++ +G YP TL++EYK +F Sbjct: 275 FVQSYDQYLAKISSGRVLAAIDANWHVGEAQRALREEGKHERMFGMYPATLSEEYKHPNF 334 Query: 364 WPTGFMGGYGISISSTNPDPVRTIKFLDYLASDEGQILNNWGIEGKHYTVENGKRVVINE 423 +G++GG+GI I+ DPVR IKFLD+LAS+EGQIL NWGIEG+HY V +G+RV+ E Sbjct: 335 QSSGYLGGWGIGITVDCEDPVRAIKFLDFLASEEGQILQNWGIEGEHYEVVDGERVIPEE 394 Query: 424 VQDRINNDNTAFTKESGLGFYWNIMVHYGDGAKDSTGNYYTRNFPEQLVLGYSDVEKETL 483 DR NN + + +++G+G YGDG DSTG YT P+Q++ Y+DVEKE L Sbjct: 395 EMDRRNN-SANYVRDTGIGVLKGFAPSYGDGMTDSTGQTYTIVSPDQIIEAYTDVEKEVL 453 Query: 484 AAYKATTWKDLFPKEEEFKEKAYGAAWNIAIPGEDEVSILGNKMRDITWKRIPQAILAKP 543 A Y WKDL+P +EEF K +GA WNI + ++ ++ + RDI KR+P+AILA P Sbjct: 454 ANYGVEMWKDLYPAKEEFPVKPWGAGWNITVESGSQLELINQRCRDIMKKRVPEAILASP 513 Query: 544 ADFDKIWEDYMADLDKAGVEKMEKGYTKYVQDRVALW 580 DFD IW+ +M DL++AGVE+ EK +T+ VQ+RV LW Sbjct: 514 EDFDDIWDAFMNDLEQAGVEEAEKAFTELVQERVELW 550 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,600,743,114 Number of extensions: 164003594 Number of successful extensions: 306995 Number of sequences better than 1.0e-05: 147 Number of HSP's gapped: 306833 Number of HSP's successfully gapped: 147 Length of query: 583 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 442 Effective length of database: 1,732,333,088 Effective search space: 765691224896 Effective search space used: 765691224896 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)