BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0073.0007.p (663 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1RDH5.1 A1RDH5_ARTAT Putative uncharacterized protein 557 e-156 B1D599.1 B1D599_9BACL S-layer domain protein 471 e-130 B1D8E2.1 B1D8E2_9BACL Coagulation factor 5/8 type domain protein 222 1e-55 A9WKU7.1 A9WKU7_RENSM Putative uncharacterized protein 192 1e-46 B6FS34.1 B6FS34_9CLOT Putative uncharacterized protein 191 2e-46 >A1RDH5.1 A1RDH5_ARTAT Putative uncharacterized protein Length = 1450 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 299/589 (50%), Positives = 382/589 (64%), Gaps = 13/589 (2%) Query: 6 LGKGKTWLSILLIAVMLFAMVPGADQAEASSATGVTYYLDSAAGNDSNTGTTENRPWKSL 65 L K L++ + L AM P + + + TG TYY+D+ AG D G + + W++L Sbjct: 51 LRKIPALLTVGALIATLLAMTPVSAETAHGATTGTTYYVDAEAGQDLADGRSPEQAWRTL 110 Query: 66 SKVNSTVFQPGDRILLKSGGVWNNQTLAPQGSGSAGNPVIIDRYGSGDKPKIQAGGQFKD 125 +VN+T FQPGD +LL++G WN Q L P+GSG+A P+ + +YG G KP ++ GQ D Sbjct: 111 DRVNATTFQPGDAVLLRAGKTWNGQ-LWPKGSGTAEAPITVGKYGDGLKPALRGNGQVDD 169 Query: 126 AVTLSNQQYWEIRNLDVSNTAPVTGTFAESLGDFRGIHVTGADAGTLAYFRISGVDVHDV 185 V L NQ +W +R+LDVSN T A +L D RG+H++G ++ TL+ I GVDVHDV Sbjct: 170 VVRLFNQSHWVLRDLDVSNQRTGGATEAANLADLRGVHISGDNSTTLSGLSIIGVDVHDV 229 Query: 186 SGEIAWISGTVPETPDPGIRFKTGWDGSKKTGGIVFDTTVADPLH--PQRATVFNDVIIE 243 +GE+ WISG+ PGI F TGWDGSKKTGGIVFDTTV D +H P T+ ND+++E Sbjct: 230 TGEVNWISGSTANNA-PGINFGTGWDGSKKTGGIVFDTTVPD-IHNPPSTPTILNDILVE 287 Query: 244 NSTVKNTSFGGIIFKQYAXXXXXXXXXXXXXXXX-XXRDSETDAKFTPHTNIIIRGNYIT 302 STV NTSF GI+ KQY R + TD KF PHTN+ IR NYI Sbjct: 288 GSTVVNTSFAGIVVKQYTGDGRDANGNIIATPTGWGTRVNATDPKFVPHTNVTIRNNYIR 347 Query: 303 QKATDFGCNAMYLTGVRGALVEHNVVDGAGTSGIEAYYADDVTIQFNEVFDTSKKAGGAD 362 Q T +GCN MYLT +RG LVEHNVV AGTSGIE YYADDVTIQ+NEV++T +KAGGAD Sbjct: 348 QDGTSYGCNGMYLTNIRGGLVEHNVVHRAGTSGIETYYADDVTIQYNEVYETQQKAGGAD 407 Query: 363 SNGIDPDKGTTKILIQYNYVHDNGDGILICQFSFGDTIIRYNVLESNTRYPVYLHSDKKA 422 SNGIDPDKGTTK LIQYNY+HDNGDG+LICQF FGD +IR NV+ N RYP+YLHSD+ A Sbjct: 408 SNGIDPDKGTTKQLIQYNYLHDNGDGVLICQFVFGDAVIRNNVIVDNKRYPIYLHSDRAA 467 Query: 423 VAEVYNNTIYNDASGYMIYGYGTSLNATYNIRNNILYTTRAVQELTLSPTIMYDNNSYYA 482 A+VYNNTI N S Y+IYGYG+SL ATY+IRNNI+++T+ LT S TI Y+NN Y Sbjct: 468 KAQVYNNTIVNRVSNYLIYGYGSSLAATYDIRNNIIHSTKPFATLTTSSTIDYENNLY-- 525 Query: 483 SAGALTPPAGDSHARTGNPQLAD-PGKGTSGTETDGPALDSLGGYQLKPESMLINRGLNI 541 S LT P D+ A G+ + G GT GP L + G+ ++ S +N Sbjct: 526 SGAQLTVPDTDTAALVGDAMFTNTAATGPYGTAQTGPQLATANGFSVQSGSKAVNTSAQ- 584 Query: 542 LDPASAGVKDFAGQPLYNGNADLGAFEYYDPS-LTTATLAGRITNSAGK 589 L+P++A D+AG P G DLGAFEY P+ T T +G + + G+ Sbjct: 585 LEPSAA--TDYAGAPRPVGAPDLGAFEYATPAGAATETASGFVRDQGGR 631 >B1D599.1 B1D599_9BACL S-layer domain protein Length = 1682 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 272/606 (44%), Positives = 361/606 (59%), Gaps = 42/606 (6%) Query: 15 ILLIAVMLF-AMVPGADQAEASSATGVTYYLDSAAGNDSNTGTTENRPWKSLSKVNSTVF 73 +L+I + +F A+VP + A A +A G TYY+DSA G+D N G +E WKSL+KV+ F Sbjct: 19 VLVIVLSIFSAIVPPSVFASAGAA-GTTYYVDSAGGDDGNDGLSEEAAWKSLTKVSVATF 77 Query: 74 QPGDRILLKSGGVWNNQTLAPQGSGSAGNPVIIDRYG-SGDKPKIQAGGQFKDAVTLSNQ 132 QPGDRILLK+G W + L P GSG G+P+ ID YG +G KPK+ G V NQ Sbjct: 78 QPGDRILLKAGSEWTGEQLHPLGSGVEGSPITIDSYGGAGSKPKLNGAGVIDSVVEFYNQ 137 Query: 133 QYWEIRNLDVSNTAPVTGTFAESLGDFRGIHVTGADAGTLAYFRISGVDVHDVSGEIAWI 192 QYW+I NL+++NTA L D RG+HVTG DAG L +F ISGV++HDV+G WI Sbjct: 138 QYWDIHNLEITNTAAGAPQDPSKLADLRGMHVTGQDAGVLKHFYISGVNIHDVTGWNMWI 197 Query: 193 SG-TVPETPDPGIRFKTGWDGSKKTGGIVFDTTVADPLHPQRATVFNDVIIENSTVKNTS 251 SG T + P GI GWDGSK+TGGI+F+ + P T F+DV+IENS ++ S Sbjct: 198 SGSTADDEPGSGIIHGAGWDGSKRTGGILFE--ILKPGANPVPTKFDDVVIENSVFQDNS 255 Query: 252 FGGIIFKQYAXXXXXXXXXXXXXXXXXXRD--SETDAKFTPHTNIIIRGNYITQKATDFG 309 FGGIIFKQY D ++ PHTNI IRGNY +Q ++F Sbjct: 256 FGGIIFKQYEGDVHWASRDDGKNHSSPTDPLGQWYDPEWYPHTNITIRGNYFSQYDSNFA 315 Query: 310 CNAMYLTGVRGALVEHNVVDGAGTSGIEAYYADDVTIQFNEVFDTSKKAGGADSNGIDPD 369 C+ +YLT V+ ALVEHNV GAGTS IE YY D++T+Q+NEV+DT KAGGADSN IDPD Sbjct: 316 CDTIYLTSVKDALVEHNVSAGAGTSAIEMYYTDNITVQYNEVYDTLAKAGGADSNAIDPD 375 Query: 370 KGTTKILIQYNYVHDNGDGILICQFSFGDTIIRYNVLESNTRYPVYL--HSDKKAVAEVY 427 K +T ILIQYNY+H+ GDGIL+C F FG +RYN+++ +L H D K + VY Sbjct: 376 KESTNILIQYNYIHNTGDGILLCGFVFGTATVRYNIIQDAAPAKRFLNPHGD-KGMQLVY 434 Query: 428 NNTIYNDASGYMIYGYGTSLNATY--------NIRNNILYTTRA--VQELTLSP--TIMY 475 NN YN +G + +S + Y + NNI Y ++ +T++ + Y Sbjct: 435 NNIFYNTQAGSNVTFVNSSGGSAYLNDSDYAVKMFNNIFYNAAGGPIKPVTIASGTGVTY 494 Query: 476 DNNSYYASAGALTPPAGDSHARTGNPQLADPGKGTSGTETDGPALDSLGGYQLKPESMLI 535 D N Y+ +TP A ++HA G+P+ A P T G + GP LD G++L P S+ I Sbjct: 495 DRNLYFGQ--NVTPAANEAHAIAGDPKFAGPVPTTRGDASTGPILD-FTGFKLLPGSLAI 551 Query: 536 ------------NRGLNILDPASAGVKDFAGQPLYNGNADLGAFEYY-DPSLTTATLAGR 582 N +NI D G KDFAGQPLYNG D+GAFEYY D + T ++ G+ Sbjct: 552 GNALDEIGMNLSNSTMNITD---NGGKDFAGQPLYNGKPDIGAFEYYGDANSGTESVTGQ 608 Query: 583 ITNSAG 588 + ++AG Sbjct: 609 VKDAAG 614 >B1D8E2.1 B1D8E2_9BACL Coagulation factor 5/8 type domain protein Length = 710 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 203/606 (33%), Positives = 282/606 (46%), Gaps = 102/606 (16%) Query: 13 LSILLIAVMLFAMVPGADQAEASSATGVTYYLDSAAGNDSNTGTTENRPWKSLSKVNSTV 72 L+ LL+ +L +VP SA TYY+DSA+G+DSN GT+ + PWK+L KVN+T Sbjct: 9 LAFLLLCSVLLTIVPAT-----VSAANTTYYVDSASGSDSNNGTSTSTPWKTLDKVNATT 63 Query: 73 FQPGDRILLKSGGVWNNQTLAPQGSGSAGNPVIIDRYGSGDKPKIQAGG-----QFKDAV 127 FQPGD+IL KSGGVWN Q L P+GSG+ G+P+ ID+YG +P I GG Q AV Sbjct: 64 FQPGDQILFKSGGVWNGQ-LWPKGSGTVGSPIKIDKYGGTARPIINGGGTARAYQSTGAV 122 Query: 128 TLSNQQYWEIRNLDVSN-----TAPVTGTFAESL-GDFR-GIHVT--------GADAGTL 172 L NQ+YWEI NL+V+N T T+A S + R GI V G D G + Sbjct: 123 MLRNQEYWEISNLEVTNDDNFSVDLTTVTYANSKPSNIRDGILVVLDTDLVPAGGD-GVM 181 Query: 173 AYFRISGVDVHDVSGEIAWISGTVPETPDPGIRFKTGWDGSKKTGGIVFDTTVADPLHPQ 232 + I VHDV AW + + GGI+F V L P Sbjct: 182 DHIYIHDNYVHDVDSPNAW---------------PNQYGNASFNGGIMF--YVIGTLKPN 224 Query: 233 RATVFNDVIIENSTVKNTSFGGIIFKQYAXXXXXXXXXXXXXXXXXXRDSETDAKFTPHT 292 FNDV IEN+T++ I Y E T Sbjct: 225 M--TFNDVRIENNTIEKVDLLAIANFNYTTTTAF--------------QDEIGPNNLWQT 268 Query: 293 NIIIRGNYITQKATDFGCNAMYLTGVRGALVEHNVVDG------AGTSGIEAYYADDVTI 346 NI I NY+ + G A+ + + A+VE+NVVDG A ++GI + + +V Sbjct: 269 NIYIGHNYM----RNIGQGAIDICDAKDAVVEYNVVDGWSKRYNAESAGIYPWKSQNVVF 324 Query: 347 QFNEVF--DTSKKAGGADSNGIDPDKGTTKILIQYNYVHDNGDGILICQFSFGDTIIRYN 404 Q NEV+ T+ A D D D I+ Q+NY H+N G + + I RYN Sbjct: 325 QNNEVYGGPTTTGANNGDGTAFDFDSPNINIVYQFNYTHNNPMGWMSYLGRSSNNIARYN 384 Query: 405 VLESNTRYPV---YLHSDKKAVAEVYNNTIYN-------DASGYMIYGYGTSLNATYNIR 454 + + N Y + + D A + N IYN +++ + Y S+ Y Sbjct: 385 ISDDNAAYLIKFGWFDVDTSATYFLNNVFIYNGSVTKFTNSNANLASTYFKSV--PYYFY 442 Query: 455 NNILY--TTRAVQELTLSP----TIMYDNNSYYASAGALTPPAGDSHART-GNPQLADPG 507 NN+ Y TT + SP T ++ NN+YY + G+ + A+ PQ+ +PG Sbjct: 443 NNVFYDKTTPSSSFWASSPSGYGTAVFRNNAYYVTTGSHAAGEPNDPAKVISPPQMVNPG 502 Query: 508 K----GTSGTETDGPALDSLGGYQLKPESMLINRGLNILDPASAGVKDFAGQPLYNGNA- 562 + G +G + D GY+L+ S LIN G N+ G KDF G LYNG+A Sbjct: 503 QAPTLGANGFTSGATVWD---GYKLQTTSPLINAGFNV---PQLGTKDFYGNALYNGSAP 556 Query: 563 DLGAFE 568 D+G FE Sbjct: 557 DIGVFE 562 >A9WKU7.1 A9WKU7_RENSM Putative uncharacterized protein Length = 507 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 147/441 (33%), Positives = 212/441 (48%), Gaps = 72/441 (16%) Query: 1 MKARRLGKGKTWLSILLIAVMLFAMVPGADQAEASSATGVTYYLDSAAGNDSNTGTTENR 60 MK+ LG T ++L+ A L P + A TYYLD A+GND GT Sbjct: 1 MKSAFLG---TLCTVLIGASFLAVGAPAITDSVAK-----TYYLDCASGNDQADGTAVES 52 Query: 61 PWKSLSKVNSTVFQPGDRILLKSGGVWNNQTLAPQGSGSAGNPVIIDRYGSGDKPKIQAG 120 PWKSL+K++ T FQPGD I +KSG TLAPQGSG+A P+ ID YG+G P+IQ Sbjct: 53 PWKSLAKISGTTFQPGDAIKIKSGTSCVG-TLAPQGSGTAEAPITIDAYGAGAAPQIQGA 111 Query: 121 GQFKDAVTLSNQQYWEIRNLDVSNTAPVTGTFAESLGDFRGIHVTGADAGTLAYFRISGV 180 G + A+ L NQQ WEIRNLDVSN S+G+ R + V D GT ++ + + Sbjct: 112 GASR-AIKLYNQQGWEIRNLDVSNKGA-------SVGNRRAVSVELKDFGTASHIVLENL 163 Query: 181 DVHDVSGEIAWISGTVPETPDPGIRFKTGWDGSKKTGGIVFDTTVADPLHPQRATVFNDV 240 +HDV+G+ +T D G +GGI F T T F D+ Sbjct: 164 SIHDVNGD---------DTKDTG-----------GSGGIYFSIT-----GTAVQTAFEDL 198 Query: 241 IIENSTVKNTSFGGIIFKQYAXXXXXXXXXXXXXXXXXXRDSETDAKFTPHTNIIIRGNY 300 +++N+++++ GI + ++ F P N++I GN Sbjct: 199 LVKNNSIRSVDREGIFM--------------VSTWNRSGFEVQSAGTFLPWANVVISGNQ 244 Query: 301 ITQKATDFGCNAMYLTGVRGALVEHNVVDG-----AG-TSGIEAYYADDVTIQFNEVFDT 354 + D G + + GALVEHN VDG AG +G+ Y +D+ ++NE Sbjct: 245 L----ADLGGDGIVPGNTTGALVEHNKVDGFQKRSAGYNAGMWTYDSDNTVFRYNEATGG 300 Query: 355 SKKAGGADSNGIDPDKGTTKILIQYNYVHDNGDG-ILICQFS--FGDTIIRYNVLESNTR 411 + D D D+GT ++ QYNY H N G +L+C + + ++RYN+ ++ Sbjct: 301 TTT---RDGMAYDVDQGTDGVIFQYNYSHHNAGGFLLLCNANGILKNAVVRYNISIDDSY 357 Query: 412 YPVYLHSDKKAVAEVYNNTIY 432 V S A VYNN+IY Sbjct: 358 RGVENCSGTIESAAVYNNSIY 378 >B6FS34.1 B6FS34_9CLOT Putative uncharacterized protein Length = 1269 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 187/643 (29%), Positives = 276/643 (42%), Gaps = 139/643 (21%) Query: 1 MKARRLG---KGKTWLSILLIAVMLFAMVPG--ADQAEASSATGVTYYLDSAAGNDSNTG 55 MK+R+ G K + + AV+ ++PG D A+ TG TYY+ + GND+N G Sbjct: 1 MKSRKEGVIMKNRILAMFMAAAVVGTTVLPGMTVDAAKQGKTTGTTYYVSTVDGNDNNDG 60 Query: 56 TTENRPWKSLSKVNSTVFQPGDRILLKSGGVWNNQTLAPQGSGSAGNPVIIDRYGSGDKP 115 +E + + SL K+N +PGD++LL+ G V+ N L +G GS P+++D YG G+ P Sbjct: 61 MSEGKAFYSLDKINELTLKPGDKVLLERGSVFQNGFLHLKGDGSEEAPIVVDSYGKGNLP 120 Query: 116 KIQAGGQ---------------------FKDAVTLSNQQYWEIRNLDVSNTAPVTGTF-- 152 I+ GQ +V L + +Y EI+NL+++N AP T Sbjct: 121 IIETNGQGIWYQNYRAPLGNAKHKYQGYVSSSVLLYDVEYVEIKNLEITNKAPKIETAYN 180 Query: 153 AESLGDFRGIHVTGADAGTLAYFRISGVDVHDVSGEIAWISGTVPETPDPGIRFKTGWDG 212 AE + + G+ + GTL + + + VHDV G + +D Sbjct: 181 AEDVMNRTGVAAVAQNEGTLNHIYLDNLYVHDVIGNV--------------------YDK 220 Query: 213 SKKTGGIVFDTTVADPLHPQRATV-FNDVIIENSTVKNTSFGGIIFKQYAXXXXXXXXXX 271 GGI F T P+ ++DV IEN V+NT+ GI Y+ Sbjct: 221 HMNNGGIYF--TAFQPMDASTGIAKYDDVKIENCYVENTNRWGIAVG-YSYTHGQFHGGV 277 Query: 272 XXXXXXXXRDSETDAKFTPH--TNIIIRGNYITQKATDFGCNAMYLTGVRGALVEHNVVD 329 +D K + + TN++IR NY+ D G +A+ L L+E+NV D Sbjct: 278 I-----------SDEKISTYGSTNVVIRNNYVK----DAGGDAITLMYCDRPLIEYNVSD 322 Query: 330 GAG----------------TSGIEAYYADDVTIQFNEVFDTSKKAGGADSNGIDPDKGTT 373 GA +GI + D Q+NE FDT + D D D G Sbjct: 323 GAARQINTKDYNATGFGRVAAGIWPWKCKDAIFQYNEAFDTCQ---NQDGQAWDADYGDG 379 Query: 374 KILIQYNYVHDNGDG-ILICQFSFGDTIIRYNVLESNTRYPVYLHSDKKAVAEVYNNTIY 432 + QYNY H+NG G ++ C + I RYN+ S ++ + A VYNNT + Sbjct: 380 TVY-QYNYSHNNGGGSVMFCGGEAINNIFRYNI--SQNDLGGVINPAGQPDAHVYNNTFF 436 Query: 433 ----------NDASGYMIYGYGTSLNATYNIRNNILYTTRAVQE------LTLSPTIMYD 476 N G M+ + NNI+Y + + T YD Sbjct: 437 VKEGIDFIRTNMGGGPMV------------VENNIIYYNGSAPKEENWFKHTNETKTKYD 484 Query: 477 NNSYYASAGALTPPAGDSHARTGNPQLADPGKG----TSGTETDGPALDSL-------GG 525 NN YY A PA D++A +P+ ADPGK +G E G DS+ G Sbjct: 485 NNLYYNYANV---PANDANAIEADPKFADPGKAPTAPLAGVEA-GNIKDSIVHERTAFDG 540 Query: 526 YQLKPESMLINRGLNILDPASAGVKDFAGQPLYNGNADLGAFE 568 Y+L +S +N G I + G KDF G + G D+GAFE Sbjct: 541 YKLASDSPAVNAGKVI---KNNGGKDFFGNKV-TGTPDIGAFE 579 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,024,264,136 Number of extensions: 180748801 Number of successful extensions: 283835 Number of sequences better than 1.0e-05: 71 Number of HSP's gapped: 283666 Number of HSP's successfully gapped: 83 Length of query: 663 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 520 Effective length of database: 1,713,491,058 Effective search space: 891015350160 Effective search space used: 891015350160 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 135 (56.6 bits)