BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0073.0006.p (452 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D594.1 B1D594_9BACL Extracellular solute-binding protein family 1 687 0.0 B3KAH6.1 B3KAH6_9BACI Extracellular solute-binding protein family 1 363 2e-98 B1DB02.1 B1DB02_9BACL Extracellular solute-binding protein family 1 262 7e-68 B1DJR3.1 B1DJR3_9BACL Extracellular solute-binding protein family 1 211 8e-53 B3KGV1.1 B3KGV1_9BACI Extracellular solute-binding protein family 1 206 4e-51 >B1D594.1 B1D594_9BACL Extracellular solute-binding protein family 1 Length = 449 Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/392 (82%), Positives = 361/392 (92%) Query: 61 EPVTLTVAWWGSQARHDATLKALDQYKALNPNVTFQTQFSGWDGYFDKLAVQYSAKSAPD 120 EPVTLT+AWWGSQ RHDATLKALDQYKAL+PNVTFQTQFSGWDGY+DKLAVQYSAK+APD Sbjct: 57 EPVTLTIAWWGSQPRHDATLKALDQYKALHPNVTFQTQFSGWDGYYDKLAVQYSAKNAPD 116 Query: 121 IIQMDAAYLNDYAGRGLLADLKEVNVENIEATTMDGGKVNGTQYAVPLGVAALGMVYDKT 180 IIQMDAAY+NDYAGR LLADLK++NV +I+ T+DGGKVNGT YA+PLGVAALGMVYDKT Sbjct: 117 IIQMDAAYVNDYAGRSLLADLKDLNVADIDPATVDGGKVNGTLYAIPLGVAALGMVYDKT 176 Query: 181 VVEKLGLEAPKFGWTWDDYYAFGEAAKAKLGEDKYVFADQSADLVDYTAYQYSMGKGYIF 240 VVEKLGL AP FGW+WD+++AFGEAAKAKLG+DKYVF DQSADLVDYT+YQYS GKGYIF Sbjct: 177 VVEKLGLTAPTFGWSWDEFFAFGEAAKAKLGKDKYVFVDQSADLVDYTSYQYSQGKGYIF 236 Query: 241 DAEGNLSVDKDTWIGFMTKMDELRKKGILTPADITTTDKELDPQLDSVINGNAVVRHLFS 300 DA+GNL++DK TWI +MTKM ELRKKGILTPADITTTDKELDPQLDSVING+AV RHLFS Sbjct: 237 DAQGNLAIDKATWIDYMTKMGELRKKGILTPADITTTDKELDPQLDSVINGSAVARHLFS 296 Query: 301 NQVGSIEALKPDAFGYASMPYGTEAGGWLKPGMFWSVNAQSAHQAEAVKFVDWFVNNEEA 360 NQV +IEALKP AFGYASMP GTE+GGWLKP MFWSVNAQS HQA A +FVDWF+NNEEA Sbjct: 297 NQVSAIEALKPGAFGYASMPKGTESGGWLKPSMFWSVNAQSKHQAAATEFVDWFINNEEA 356 Query: 361 GKTLGLTRGTPVNSKVVEALTPTFSDADKTSLDFLNQVTPDAQKFINDPQGWGNFKNDYK 420 GKTLGLTRGTPVNSKVV A+ PTFSDADK SLDFL++VTPDAQ FINDP+GWG+FKNDYK Sbjct: 357 GKTLGLTRGTPVNSKVVTAIEPTFSDADKVSLDFLSKVTPDAQTFINDPKGWGSFKNDYK 416 Query: 421 TIVEKLQFGQSTPEEAYAELLKTAEQYTAEAK 452 T+VEKLQ+ QSTP+EAY EL+K A +Y EAK Sbjct: 417 TVVEKLQYDQSTPDEAYDELMKVAAKYAEEAK 448 >B3KAH6.1 B3KAH6_9BACI Extracellular solute-binding protein family 1 Length = 441 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 166/389 (42%), Positives = 250/389 (64%), Gaps = 2/389 (0%) Query: 61 EPVTLTVAWWGSQARHDATLKALDQYKALNPNVTFQTQFSGWDGYFDKLAVQYSAKSAPD 120 E V L + WWGSQ RH+ATLKAL+ Y NP+VTF+ ++SG DGY DKL+ Q +A + PD Sbjct: 52 ENVKLRIMWWGSQPRHEATLKALETYTQKNPHVTFEPEYSGMDGYLDKLSTQAAAHNEPD 111 Query: 121 IIQMDAAYLNDYAGRGLLADL-KEVNVENIEATTMDGGKVNGTQYAVPLGVAALGMVYDK 179 I QMD +++D+ R L +L +V ++ + + + G+ +G QY VPLG A GM+YDK Sbjct: 112 IFQMDPGWVSDWTSRNQLEELDTKVRLDELTPSLLPIGQRDGKQYGVPLGSVAFGMIYDK 171 Query: 180 TVVEKLGLEAPKFGWTWDDYYAFGEAAKAKLGEDKYVFADQSADLVDYTAYQYSMGKGYI 239 +EKLG P GWTWDD++A E K KL E +Y D + + ++AY Y+ GKG + Sbjct: 172 AALEKLGATMPTDGWTWDDFFALAEEVKPKLAEGQYFTLDYAGNYFMFSAYHYAKGKGTL 231 Query: 240 FDAEGNLSVDKDTWIGFMTKMDELRKKGILTPADITTTDKELDPQLDSVINGNAVVRHLF 299 +G ++D+ T++ + K ++LRK G++ PAD+ +DKE+DP D ++NG + R+ F Sbjct: 232 ITEDGKFNIDEATFLEWTKKFEQLRKDGLIPPADLNASDKEMDPTADLLVNGKILFRYSF 291 Query: 300 SNQVGSIEALKPDAFGYASMPYGTEAGGWLKPGMFWSVNAQSAHQAEAVKFVDWFVNNEE 359 SN + +++K A+ +MP EAGGWLKP M++S++ S H+ EA KF+DWF+N+ E Sbjct: 292 SNNYTTWDSMKEGAYDLVTMPRAEEAGGWLKPSMYFSLSPNSKHKEEAAKFIDWFINDPE 351 Query: 360 AGKTLGLTRGTPVNSKVVEALTPTFSDADKTSLDFLNQVTPDAQKFINDPQGWGNF-KND 418 AG LG RG P N+K+ E+L P + +K + ++ TPD Q F P+GW NF D Sbjct: 352 AGAILGTARGVPANAKIAESLIPNLPEGEKVGMKLIDATTPDGQIFTTGPEGWVNFIDKD 411 Query: 419 YKTIVEKLQFGQSTPEEAYAELLKTAEQY 447 + + ++L FG++TPE+AY L K A++Y Sbjct: 412 FPLVRDELSFGRTTPEKAYESLKKAAQEY 440 >B1DB02.1 B1DB02_9BACL Extracellular solute-binding protein family 1 Length = 455 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 138/386 (35%), Positives = 211/386 (54%), Gaps = 5/386 (1%) Query: 62 PVTLTVAWWGSQARHDATLKALDQYKALNPNVTFQTQFSGWDGYFDKLAVQYSAKSAPDI 121 PV L + W G+ RH A LK + Y NP++TF ++ WD Y+ KL ++ S PD+ Sbjct: 62 PVKLKIMWQGADIRHQAMLKTQEVYTKENPSITFSPEYMAWDDYWKKLPTLAASHSLPDV 121 Query: 122 IQMDAAYLNDYAGRGLLADLKEVNVEN-IEATTMDGGKVNGTQYAVPLGVAALGMVYDKT 180 + MD AY+ +YA RG L DL ++++ I+ T++ K+ G Y +P+ A GM ++K Sbjct: 122 LHMDGAYIQEYATRGTLEDLSDIDLSGVIDDKTLENLKIGGKLYGIPISRNAQGMAFNKE 181 Query: 181 VVEKLGLEAPKFGWTWDDYYAFGEAAKAKLGEDKYVFADQSADLVD-YTAYQYSMGKGYI 239 +E G+E PK WTWD+Y+ F A+ KL + Y +D D D Y YQ S GKG I Sbjct: 182 ALEAAGIELPKKDWTWDEYFDFARNARTKLPDGVYPISD--TDTWDFYQYYQMSYGKGRI 239 Query: 240 FDAEGN-LSVDKDTWIGFMTKMDELRKKGILTPADITTTDKELDPQLDSVINGNAVVRHL 298 +G ++DKD ++ F E R+K I+ PAD+ + KE DPQ D + +G + R Sbjct: 240 IQEDGKKFNLDKDLFMNFYGIHAEFREKKIVPPADMVSAFKENDPQADPMASGKVMTRGA 299 Query: 299 FSNQVGSIEALKPDAFGYASMPYGTEAGGWLKPGMFWSVNAQSAHQAEAVKFVDWFVNNE 358 VG++E L P ++P G E GGW +P +F SV+ S H+ EA F+ WFV ++ Sbjct: 300 TVGSVGALEQLMPGKIDVVNLPVGPEGGGWAQPTIFLSVSTDSKHKDEAKAFIKWFVTDK 359 Query: 359 EAGKTLGLTRGTPVNSKVVEALTPTFSDADKTSLDFLNQVTPDAQKFINDPQGWGNFKND 418 AG+T G G P+ ++ AL PT + +K + A F GW + ++ Sbjct: 360 AAGQTYGTNFGIPIYDEIYTALEPTLAPKEKLGKKLYDTAIDKAMPFSPAAAGWTEWVDN 419 Query: 419 YKTIVEKLQFGQSTPEEAYAELLKTA 444 YK ++ + FGQ + E+AY E+ K+ Sbjct: 420 YKKTMDSVMFGQKSIEDAYNEISKSG 445 >B1DJR3.1 B1DJR3_9BACL Extracellular solute-binding protein family 1 Length = 442 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 131/399 (32%), Positives = 211/399 (52%), Gaps = 16/399 (4%) Query: 63 VTLTVAWWGSQARHDATLKALDQYKALNPNVTFQTQFSGWDGYFDKLAVQYSAKSAPDII 122 +TL +AWWGSQ RHD TL+ + Y+A +PNV + +++ +D Y+ KLA + +A PDI+ Sbjct: 51 ITLRIAWWGSQPRHDYTLEVIKMYEAAHPNVKIEAEYANFDDYWKKLAPEAAASELPDIV 110 Query: 123 QMDAAYLNDYAGRGLLADL-----KEVNVENIEATTMDGGKVNGTQYAVPLGVAALGMVY 177 QMD +YL+ Y +G LADL +++ +I + GGK+ Y LGV + Y Sbjct: 111 QMDISYLSQYGSKGQLADLTPYLKNQIDTTDISDNAISGGKLGDKLYGFNLGVNTVNFQY 170 Query: 178 DKTVVEKLGLEAPKFGWTWDDYYAFGEAAKAKLGEDKYVFADQSADLVDYTAYQYSMGKG 237 D +++KLG++ P WTWDDY+A AK E F + V + Y + G+ Sbjct: 171 DPELLKKLGVDKPADDWTWDDYFALASKAK----EAGLYFDNGFRPEVFFGYYLRTKGQ- 225 Query: 238 YIFDAEGN-LSVDKDT-WIGFMTKMDELRKKGILTPADITTTDKELDPQLDSVINGNAVV 295 ++++AEGN L + D ++ F + +L K G P D+ K L+ L ++ G V Sbjct: 226 HLYNAEGNALGYEDDQLFVDFFKPLAQLVKDGDTPPPDVKAQIKGLEDDL--LVKGQQVG 283 Query: 296 RHLFSNQVGSIEALKPDAFGYASMPYGTEAGG-WLKPGMFWSVNAQSAHQAEAVKFVDWF 354 ++NQ I+ + A+MP G +LKP M++S+ S + A F+++F Sbjct: 284 IWQWTNQFVGIQQVANRPLEMANMPNPDRVKGLYLKPSMYFSIAQNSKQKEAAADFINFF 343 Query: 355 VNNEEAGKTLGLTRGTPVNSKVVEALTPTFSDADKTSLDFLNQVTPDAQKF-INDPQGWG 413 VN+ EA K + RG PVNSKV+EA+ PT A + D++ ++ + DP G Sbjct: 344 VNDVEANKLIKGDRGVPVNSKVIEAIKPTLEPAQQQVFDYVAWAQDNSSQMDPPDPIGAA 403 Query: 414 NFKNDYKTIVEKLQFGQSTPEEAYAELLKTAEQYTAEAK 452 + ++ E++ F Q TPE+A + + A A+ K Sbjct: 404 EIITLFSSLAEQMDFQQITPEDAAKQFREEANAILAKNK 442 >B3KGV1.1 B3KGV1_9BACI Extracellular solute-binding protein family 1 Length = 446 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 141/405 (34%), Positives = 214/405 (52%), Gaps = 20/405 (4%) Query: 61 EPVTLTVAWWGSQARHDATLKALDQYKALNPNVTFQTQFSGWDGYFDKLAVQYSAKSAPD 120 +PV L +AWWG Q+RHD TLK ++ Y++ NP+VT + +++ +D Y+ KLA Q A PD Sbjct: 48 DPVKLRIAWWGGQSRHDYTLKVIEMYESQNPHVTIEPEYAPFDDYWKKLAPQAVAGGLPD 107 Query: 121 IIQMDAAYLNDYAGRGLLADLK------EVNVENIEATTMDGGKVNGTQYAVPLGVAALG 174 IIQMD +YLN YAGR LADLK E++V ++ + GG+VNG A+ LGV AL Sbjct: 108 IIQMDISYLNQYAGRNQLADLKPFTESGELDVADVSENALRGGEVNGKLVAMNLGVNALQ 167 Query: 175 MVYDKTVVEKLGLEAPKFGWTWDDYYAFGEAAKAKLGEDKYVFADQSADLVDYTAYQYSM 234 +D ++K G++ P WTWDD G AK K G FA + Y Y ++ Sbjct: 168 TTFDVETMKKNGIDIPSKEWTWDDMDKMGAQAKEK-GLQIGGFAYRHDVFFPY--YLRTI 224 Query: 235 G-KGYIFDAEGNLSVDKDTWIGFMTKMDELRKKGILTPADITTTDKELDPQLDSVINGNA 293 G K Y D + D +I + T+ + G + D K + + D ++ GN+ Sbjct: 225 GQKMYSADGKTIGYSDDQPFIDYFTRYQKWYDNGYILSLDKEAQKKGVAEE-DEIVLGNS 283 Query: 294 VVRHLFSNQVGSIEALKPD-AFGYASMP-YGTEAGGWLKPGMFWSVNAQSAHQAEAVKFV 351 + +SNQ ++ L D + MP GT+ G +LKP M++SV S H+ EA KF+ Sbjct: 284 ISGTGWSNQFLAVANLVTDRSLELNPMPGPGTKDGLFLKPSMYFSVTETSKHKEEAAKFI 343 Query: 352 DWFVNNEEAGKTLGLTRGTPVNSKVVEALTPTFSDADKTSLDFLN----QVTPDAQKFIN 407 +F+N+ EA K + RG PV++KV EAL P S+ + D++ TP Sbjct: 344 SFFINDIEANKLIKGERGVPVSAKVKEALKPLLSENEAKIFDYVTWAEANSTPGDPP--- 400 Query: 408 DPQGWGNFKNDYKTIVEKLQFGQSTPEEAYAELLKTAEQYTAEAK 452 +P G + + + E++ F + + E+A AE K A A ++ Sbjct: 401 NPIGAVEIEKLLRDLSERILFKKISIEDAAAEFRKEANAILARSQ 445 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,501,182,394 Number of extensions: 107306018 Number of successful extensions: 266338 Number of sequences better than 1.0e-05: 537 Number of HSP's gapped: 266319 Number of HSP's successfully gapped: 537 Length of query: 452 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 313 Effective length of database: 1,751,175,118 Effective search space: 548117811934 Effective search space used: 548117811934 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)