BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0069.0010.p
         (118 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K7R1.1 B3K7R1_9BACI Putative uncharacterized protein                151   2e-35
Q2B3K0.1 Q2B3K0_9BACI Putative uncharacterized protein                105   2e-21
Q2B802.1 Q2B802_9BACI Putative uncharacterized protein                103   6e-21
A6CH86.1 A6CH86_9BACI Putative uncharacterized protein                102   1e-20
A7Z2E6.1 A7Z2E6_BACA2 YflH                                             83   6e-15

>B3K7R1.1 B3K7R1_9BACI Putative uncharacterized protein
          Length = 116

 Score =  151 bits (382), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 94/112 (83%)

Query: 7   MSEHNHVVNKDGNVTMAKVSDALDRIEPEQKDVILKNFEDFRSYLRKRIQLAQKIGLGEE 66
           MSEHNHVVNK+G + ++KV DA+DRI+ ++K+ IL +F+ F+SYL KRIQLA+ IGL EE
Sbjct: 1   MSEHNHVVNKNGELDVSKVDDAMDRIDDKEKERILADFDAFQSYLNKRIQLAESIGLNEE 60

Query: 67  QLXXXXEKIADYLAAHEEPRNSEEKLLLELWKVGSKEERQRLAHMLVKLARN 118
           QL    EK+A YLAA+EEPRNSEEKLL ELWKVG++ E+ +LAH+LVKLA+N
Sbjct: 61  QLAQAAEKVAGYLAANEEPRNSEEKLLQELWKVGTQAEQHQLAHLLVKLAQN 112


>Q2B3K0.1 Q2B3K0_9BACI Putative uncharacterized protein
          Length = 114

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 80/110 (72%)

Query: 7   MSEHNHVVNKDGNVTMAKVSDALDRIEPEQKDVILKNFEDFRSYLRKRIQLAQKIGLGEE 66
           MSE NH+VN++G +    + D + RI  ++   IL +F++FR YL +RI+L +KIGL EE
Sbjct: 1   MSEQNHMVNENGELNENNIEDTVSRISEDKAADILSSFDEFRGYLAERIELGKKIGLNEE 60

Query: 67  QLXXXXEKIADYLAAHEEPRNSEEKLLLELWKVGSKEERQRLAHMLVKLA 116
           QL    +KIA+YLA + +P+N EEKLL ELWK G+ EE+++L+H+L+K A
Sbjct: 61  QLAATAKKIAEYLAQNVDPQNREEKLLKELWKAGNDEEKEKLSHLLLKFA 110


>Q2B802.1 Q2B802_9BACI Putative uncharacterized protein
          Length = 106

 Score =  103 bits (256), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 68/95 (71%)

Query: 21  TMAKVSDALDRIEPEQKDVILKNFEDFRSYLRKRIQLAQKIGLGEEQLXXXXEKIADYLA 80
           T +KV + L+ +  E+KD IL +FE F+ YL  ++ L +K+GL EEQL    +K+ DYLA
Sbjct: 10  TNSKVENKLENMGSEKKDEILSSFEGFKDYLGGKVSLGKKMGLNEEQLANAAQKVGDYLA 69

Query: 81  AHEEPRNSEEKLLLELWKVGSKEERQRLAHMLVKL 115
             EEPRN EEKLL ELWK G++EE+  L+H+LVKL
Sbjct: 70  KKEEPRNREEKLLQELWKSGNEEEQHALSHLLVKL 104


>A6CH86.1 A6CH86_9BACI Putative uncharacterized protein
          Length = 106

 Score =  102 bits (253), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 4/107 (3%)

Query: 9   EHNHVVNKDGNVTMAKVSDALDRIEPEQKDVILKNFEDFRSYLRKRIQLAQKIGLGEEQL 68
           EHN   +K GN    KV D L  +  ++K+ IL +F+ F  YL  ++  A K+GL EEQ 
Sbjct: 2   EHNTNDSKMGN----KVEDRLSSMSEDKKEDILSSFDKFTDYLGDKVDKADKLGLNEEQK 57

Query: 69  XXXXEKIADYLAAHEEPRNSEEKLLLELWKVGSKEERQRLAHMLVKL 115
               +K+ DYLA HEEP+N EEKLL ELWK G+KEE+  LAHMLVKL
Sbjct: 58  ARAAQKVGDYLANHEEPKNREEKLLYELWKAGNKEEQHMLAHMLVKL 104


>A7Z2E6.1 A7Z2E6_BACA2 YflH
          Length = 103

 Score = 83.2 bits (204), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 56/80 (70%)

Query: 37  KDVILKNFEDFRSYLRKRIQLAQKIGLGEEQLXXXXEKIADYLAAHEEPRNSEEKLLLEL 96
           K  IL++FE+F++YL ++I   +K+GL + ++      + DYLA HEEPRN+EEKLL EL
Sbjct: 22  KQQILEDFEEFKAYLHQKISAGKKLGLDDSKIIKSAAILGDYLAKHEEPRNAEEKLLQEL 81

Query: 97  WKVGSKEERQRLAHMLVKLA 116
           W +    E+Q LA +LVKLA
Sbjct: 82  WDIADDNEKQHLAQLLVKLA 101


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.314    0.132    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 627,609,628
Number of extensions: 21658585
Number of successful extensions: 62232
Number of sequences better than 1.0e-05: 112
Number of HSP's gapped: 62232
Number of HSP's successfully gapped: 112
Length of query: 118
Length of database: 3,060,696,203
Length adjustment: 84
Effective length of query: 34
Effective length of database: 2,269,330,943
Effective search space: 77157252062
Effective search space used: 77157252062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 126 (53.1 bits)