BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0008.p (158 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7Q7.1 B3K7Q7_9BACI Glutathione peroxidase 229 8e-59 C5DAQ3.1 C5DAQ3_9BACI Glutathione peroxidase EC=1.11.1.9 216 5e-55 B4BMP1.1 B4BMP1_9BACI Glutathione peroxidase 215 8e-55 Q5KZ16.1 Q5KZ16_GEOKA Glutathione peroxidase 215 1e-54 B7Y6L5.1 B7Y6L5_9BACI Glutathione peroxidase 215 1e-54 >B3K7Q7.1 B3K7Q7_9BACI Glutathione peroxidase Length = 159 Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 108/158 (68%), Positives = 123/158 (77%) Query: 1 MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQKLYEQYGDKGLVVLG 60 MS+Y + G EV Y GKVL+IANTAS+CGLTPQYG+LQ+LY+QYG +GL VLG Sbjct: 1 MSVYEYHATNTKGQEVSLDQYSGKVLIIANTASQCGLTPQYGELQQLYDQYGQQGLQVLG 60 Query: 61 FPCNQFAGQEPGTSEEAEEFCQINYGVTFPIFAKVDVNGPDASLLFQYLKGQQPGEGGSS 120 FPCNQF GQEPGTSEEAE FCQ+NYGV FP+F K+DVNG A LFQYLK +QPG Sbjct: 61 FPCNQFGGQEPGTSEEAESFCQLNYGVNFPVFQKIDVNGEHAHPLFQYLKSEQPGPNEGG 120 Query: 121 DIQWNFTKFLVDRSGNVVARVEPKESPESMKEQIEALL 158 +I WNFTKFLVDR+G VV R EPKESPESMK IE+LL Sbjct: 121 EIAWNFTKFLVDRAGKVVQRFEPKESPESMKGAIESLL 158 >C5DAQ3.1 C5DAQ3_9BACI Glutathione peroxidase EC=1.11.1.9 Length = 158 Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 103/158 (65%), Positives = 119/158 (75%) Query: 1 MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQKLYEQYGDKGLVVLG 60 MSIY F G E DY+GKVLLI NTASKCG TPQY +LQ+LYEQY D+G VVLG Sbjct: 1 MSIYDFRVKTIRGEEQSLADYKGKVLLIVNTASKCGFTPQYKELQELYEQYRDRGFVVLG 60 Query: 61 FPCNQFAGQEPGTSEEAEEFCQINYGVTFPIFAKVDVNGPDASLLFQYLKGQQPGEGGSS 120 FPCNQF QEPGT EE E+FCQ+NYGVTFP+FAKVDVNG +A LFQYLK + PG G+ Sbjct: 61 FPCNQFGNQEPGTEEEIEQFCQVNYGVTFPMFAKVDVNGENAHPLFQYLKEKAPGVLGTK 120 Query: 121 DIQWNFTKFLVDRSGNVVARVEPKESPESMKEQIEALL 158 I+WNFTKFLVDR+GNVVAR P+ P + ++E LL Sbjct: 121 AIKWNFTKFLVDRNGNVVARFAPQTRPSELISEMEKLL 158 >B4BMP1.1 B4BMP1_9BACI Glutathione peroxidase Length = 158 Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 101/158 (63%), Positives = 119/158 (75%) Query: 1 MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQKLYEQYGDKGLVVLG 60 MS+Y F+ G E Y G VLLI NTAS+CGLTPQY +LQ+LY++Y D+G VVLG Sbjct: 1 MSVYEFSAKTIRGEEQSLSAYRGDVLLIVNTASRCGLTPQYQELQELYDEYRDRGFVVLG 60 Query: 61 FPCNQFAGQEPGTSEEAEEFCQINYGVTFPIFAKVDVNGPDASLLFQYLKGQQPGEGGSS 120 FPCNQF GQEPGT EE E+FCQ+NYGVTFP+FAKVDVNG +A LFQYLK Q PG G+ Sbjct: 61 FPCNQFGGQEPGTEEEIEQFCQLNYGVTFPMFAKVDVNGDNAHPLFQYLKEQAPGALGTK 120 Query: 121 DIQWNFTKFLVDRSGNVVARVEPKESPESMKEQIEALL 158 I+WNFTKFLVDR G VVAR P+ P +K++IE LL Sbjct: 121 AIKWNFTKFLVDRDGRVVARFAPQTKPSELKKEIEKLL 158 >Q5KZ16.1 Q5KZ16_GEOKA Glutathione peroxidase Length = 158 Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/158 (63%), Positives = 117/158 (74%) Query: 1 MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQKLYEQYGDKGLVVLG 60 MS+Y F+ G E P Y GKVLLI NTAS+CG TPQY +LQ+LY++Y D+G VVLG Sbjct: 1 MSVYEFSVKTIRGEEQPLSAYRGKVLLIVNTASRCGFTPQYKELQELYDEYRDRGFVVLG 60 Query: 61 FPCNQFAGQEPGTSEEAEEFCQINYGVTFPIFAKVDVNGPDASLLFQYLKGQQPGEGGSS 120 FPCNQF GQEPGT E E+FCQ+NYGVTFP+FAKVDVNG A LFQYLK + PG G+ Sbjct: 61 FPCNQFGGQEPGTEAEIEQFCQLNYGVTFPLFAKVDVNGDHAHPLFQYLKEEAPGALGTK 120 Query: 121 DIQWNFTKFLVDRSGNVVARVEPKESPESMKEQIEALL 158 I+WNFTKFLVDR G VVAR P+ P +KE IE LL Sbjct: 121 AIKWNFTKFLVDRHGRVVARFAPQTKPSELKEDIEKLL 158 >B7Y6L5.1 B7Y6L5_9BACI Glutathione peroxidase Length = 158 Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 99/158 (62%), Positives = 120/158 (75%) Query: 1 MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQKLYEQYGDKGLVVLG 60 MS+Y F+ G E P Y G VLLI NTAS+CG TPQY +LQ+LY++Y D+G VVLG Sbjct: 1 MSVYEFSAKTIRGEEQPLSVYRGNVLLIVNTASRCGFTPQYKELQELYDEYRDRGFVVLG 60 Query: 61 FPCNQFAGQEPGTSEEAEEFCQINYGVTFPIFAKVDVNGPDASLLFQYLKGQQPGEGGSS 120 FPCNQF GQEPGT EE E+FCQ+NYGVTFP+FAKVDVNG +A LFQYLK + PG G+ Sbjct: 61 FPCNQFGGQEPGTEEEIEQFCQLNYGVTFPLFAKVDVNGDNAHPLFQYLKEEAPGALGTK 120 Query: 121 DIQWNFTKFLVDRSGNVVARVEPKESPESMKEQIEALL 158 I+WNFTKFLVDR+G VVAR P+ P ++++IE LL Sbjct: 121 AIKWNFTKFLVDRNGKVVARFAPQTKPSELRKEIEKLL 158 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.136 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,004,741,012 Number of extensions: 41978022 Number of successful extensions: 60801 Number of sequences better than 1.0e-05: 1717 Number of HSP's gapped: 58926 Number of HSP's successfully gapped: 1718 Length of query: 158 Length of database: 3,060,696,203 Length adjustment: 119 Effective length of query: 39 Effective length of database: 1,939,595,418 Effective search space: 75644221302 Effective search space used: 75644221302 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 125 (52.8 bits)