BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0003.p (403 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7P3.1 B3K7P3_9BACI Major facilitator superfamily MFS_1 438 e-121 B1DLD7.1 B1DLD7_9BACL Major facilitator superfamily MFS_1 436 e-120 C0ZJY2.1 C0ZJY2_BREBN Conserved hypothetical membrane protein 294 1e-77 B7DM01.1 B7DM01_9BACL Major facilitator superfamily MFS_1 209 5e-52 A9U886.1 A9U886_PHYPA Predicted protein (Fragment) 205 7e-51 >B3K7P3.1 B3K7P3_9BACI Major facilitator superfamily MFS_1 Length = 417 Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust. Identities = 226/400 (56%), Positives = 280/400 (70%), Gaps = 6/400 (1%) Query: 1 MKFLQAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDXXXXXXXXXXXXXX 60 MK+L+ YPKE+K FL+ASL+ + G +LMWPL TMYVFDELGRSM+D Sbjct: 1 MKWLEQYPKEVKGFLVASLVASAGGSLMWPLTTMYVFDELGRSMQDAGFVILIQSMGGIA 60 Query: 61 XXXXXXSLYHKVGVNRLIVGALALTALSLFSIPAASSNWHLFIVLMGLFGLFNSLSLPAI 120 +LYH+VGV +LIVG+L L AL LF++P + W LFI +MG G N++S+PAI Sbjct: 61 GQLLGGALYHRVGVKKLIVGSLLLNALGLFTLPFINGLWGLFIAMMGFIGFCNAVSMPAI 120 Query: 121 QAFVGFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLG--NYMLSFVLNGVTSXXXXXXX 178 QAF+GFRFA++R ELFN+IYV NNIGVALGT++SGFL +Y LSFVLNGVTS Sbjct: 121 QAFIGFRFADRRGELFNVIYVANNIGVALGTAMSGFLAEISYHLSFVLNGVTSFGFAIFF 180 Query: 179 XXYLRKVGTASPHEQTRKKQPQ---PAQSG-WRLMGQIRIYLFMSVGSMFLLIGNSIWNT 234 YL K+G + + QP+ PA G W L+G RIYLFM +GS+FL GNSIWNT Sbjct: 181 LSYLTKLGGTGASDGSHHPQPKSPLPAGPGAWALLGDTRIYLFMGLGSLFLWFGNSIWNT 240 Query: 235 GVSPFIISEGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFXXXXXXXXXXXXVFYLSGY 294 GVSPFIISEG K YG+LWTLNGILIFAAQPL + IKRW +FYL+ Y Sbjct: 241 GVSPFIISEGMSKTAYGYLWTLNGILIFAAQPLTNAIKRWAARTESSQMTASALFYLAAY 300 Query: 295 AVILLMPSYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAVGRVVG 354 VI+ M SY G+ LAM+LATLGEMLISPA+P+FIS+ A + APFY+G++GG+GA GRV+G Sbjct: 301 VVIVAMHSYPGMILAMVLATLGEMLISPAIPAFISERAGQAAPFYIGVTGGMGAAGRVIG 360 Query: 355 PYLMGVQFDNGGLAPTGWLACGMAVLSVGFFGLHAYMNRT 394 PY MG +D GGL P WLA G+AVLS F +HA ++R Sbjct: 361 PYAMGTMYDGGGLTPVAWLAAGVAVLSFLSFAVHARLSRD 400 >B1DLD7.1 B1DLD7_9BACL Major facilitator superfamily MFS_1 Length = 415 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 230/408 (56%), Positives = 288/408 (70%), Gaps = 5/408 (1%) Query: 1 MKFLQAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDXXXXXXXXXXXXXX 60 MK L YPKEIKVFLIASLINA GSALMWPLVTM+VFD+LGR+M D Sbjct: 1 MKSLSQYPKEIKVFLIASLINAIGSALMWPLVTMFVFDQLGRTMSDAGLVILVQSIGGIA 60 Query: 61 XXXXXXSLYHKVGVNRLIVGALALTALSLFSIPAASSNWHLFIVLMGLFGLFNSLSLPAI 120 +LYH+VGV +LI+GALAL A L +PA S W +FIV+MGL GLFN+LS+PAI Sbjct: 61 GQLLGGALYHRVGVKKLIIGALALNAAGLLFLPALSHAWTVFIVMMGLIGLFNALSMPAI 120 Query: 121 QAFVGFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLGN--YMLSFVLNGVTSXXXXXXX 178 QAF+GFRFAE+R ELFNI+Y+ NNIGVA+GT+LSGFL + Y LSFVLNGVTS Sbjct: 121 QAFIGFRFAERRGELFNIVYIANNIGVAVGTALSGFLADVSYSLSFVLNGVTSGVFALFF 180 Query: 179 XXYLRKVGTASPH---EQTRKKQPQPAQSGWRLMGQIRIYLFMSVGSMFLLIGNSIWNTG 235 YL++VGT S E RKKQ S W L+ +R+YLFM++G M + +GNSIWNTG Sbjct: 181 LFYLQRVGTGSGDHSAELMRKKQAAGGASLWLLVTDVRLYLFMALGGMLINLGNSIWNTG 240 Query: 236 VSPFIISEGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFXXXXXXXXXXXXVFYLSGYA 295 VSPFII G KQ +G+LWTLNGILIF AQP+ +LIKR V Y+SGY Sbjct: 241 VSPFIIEHGMSKQMFGYLWTLNGILIFVAQPVTNLIKRLAASSIKAQLTASAVLYMSGYV 300 Query: 296 VILLMPSYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAVGRVVGP 355 VIL+M S+ G+ L M+L TLGEMLI+PA+P+F+S+++ +NAPFYLGL+GGIG+ GRV+GP Sbjct: 301 VILIMHSFPGMVLGMILTTLGEMLIAPAIPAFLSENSGKNAPFYLGLTGGIGSAGRVIGP 360 Query: 356 YLMGVQFDNGGLAPTGWLACGMAVLSVGFFGLHAYMNRTARTLGRNAA 403 Y+M +D GGL P WLA A +SVG F +H+++N+ R N++ Sbjct: 361 YMMSGLYDGGGLTPVAWLAVITAAVSVGSFVIHSWVNKENRAPATNSS 408 >C0ZJY2.1 C0ZJY2_BREBN Conserved hypothetical membrane protein Length = 409 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 161/398 (40%), Positives = 234/398 (58%), Gaps = 5/398 (1%) Query: 3 FLQAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDXXXXXXXXXXXXXXXX 62 FL YP+E FLIAS IN++GSA MWPL T+YV L RSM + Sbjct: 7 FLNRYPREAIFFLIASFINSSGSAFMWPLTTLYVHTILQRSMTEAGFVLMIQSLAGIFGQ 66 Query: 63 XXXXSLYHKVGVNRLIVGALALTALSLFSIPAASSNWHLFIVLMGLFGLFNSLSLPAIQA 122 SL+H++G RLIVGAL L FSIP S W +++LM G +LS PAIQA Sbjct: 67 FIGGSLFHRLGAKRLIVGALIFQGLIQFSIPFVQS-WPAYLILMMGLGFTFNLSFPAIQA 125 Query: 123 FVGFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLG--NYMLSFVLNGVTSXXXXXXXXX 180 F+GFR+ EQR ELFNI+YV NN+G+A+GT+L+G + ++ L+F N ++ Sbjct: 126 FIGFRWKEQRRELFNIVYVGNNLGMAIGTALAGVIATLSFQLTFWFNSTSTLLFALFFFL 185 Query: 181 YLRKVGTAS-PHEQTRKKQPQPAQSGWRLMGQIRIYLFMSVGSMFLLIGNSIWNTGVSPF 239 +++ + E ++Q ++ + L+ + ++YLFM++G+ + N++WNTGV+P+ Sbjct: 186 FMKNISHQELVGENLEEQQKHHVKNSFTLLFRYQLYLFMALGAALIFFSNTVWNTGVAPY 245 Query: 240 IISEGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFXXXXXXXXXXXXVFYLSGYAVILL 299 I +G P +Y +LWT+NGI+IFA QP+ S IKR + Y G+ +L+ Sbjct: 246 ITEQGMPLSSYSWLWTINGIIIFAGQPITSWIKRLLNQSLSAQLVVSAIAYAVGFGCMLV 305 Query: 300 MP-SYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAVGRVVGPYLM 358 SY + M++ T GEMLISP +P+FIS+ NAPFYLG+ G I GR++GP M Sbjct: 306 YHGSYYAFVVGMVITTFGEMLISPTIPTFISEKTGENAPFYLGVVGAITTGGRLLGPLAM 365 Query: 359 GVQFDNGGLAPTGWLACGMAVLSVGFFGLHAYMNRTAR 396 G +D+GG+ PT +LA ++ SV LHAY +R R Sbjct: 366 GFMYDHGGIHPTLFLATLVSAGSVLLCLLHAYFHRENR 403 >B7DM01.1 B7DM01_9BACL Major facilitator superfamily MFS_1 Length = 421 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 134/392 (34%), Positives = 203/392 (51%), Gaps = 5/392 (1%) Query: 5 QAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDXXXXXXXXXXXXXXXXXX 64 Q P+E FL+A L NA GSA +WPL T+YV + L + Sbjct: 8 QPLPRETYAFLVARLFNAMGSAFIWPLTTIYVHNVLHGNYAAAGWVLFGQSLAGGLGQFA 67 Query: 65 XXSLYHKVGVNRLIVGALALTALSLFSIPAASSNWHLFIVLMGLFGLFNSLSLPAIQAFV 124 ++YH++G RLIVG+L LTAL+ +S+ A S + V + S + PA+ AFV Sbjct: 68 GGAVYHRLGPMRLIVGSLLLTALAQWSLMLAHS-LPPYAVAIAANSFLISATQPALNAFV 126 Query: 125 GFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLGN--YMLSFVLNGVTSXXXXXXXXXYL 182 G R+ A LFN +YV NNIG+A+GT+L+G + + ++L+F LNG+ + +L Sbjct: 127 GNRWKSVSARLFNTMYVMNNIGIAVGTALAGVIASISFLLTFFLNGLLTLSFAAFMWRFL 186 Query: 183 RKVGTASPHEQTRKKQPQPAQSGWRLMGQIRIYLFMSVGSMFLLIGNSIWNTGVSPFIIS 242 R++G S + PQ S W+L ++Y +S G++ L + + WN+GV+P++ Sbjct: 187 RRLGPES-EDAPVDAMPQVGASAWQLFRNYQVYALLSAGTLALNLALAAWNSGVAPYLNQ 245 Query: 243 EGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFXXXXXXXXXXXXVFYLSGYA-VILLMP 301 G Y LWT+NG+LI QP+ +KR + Y +A + + Sbjct: 246 TGHQPDAYSVLWTVNGLLILVGQPVTGWLKRRVTQAPTAQLVASSLLYSVAFAGMAIAHR 305 Query: 302 SYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAVGRVVGPYLMGVQ 361 +Y L M++AT GEML +P +P ++ A FYLGL G IG VG ++GP L G Sbjct: 306 AYPALVAGMVVATFGEMLNAPTVPELVTRMTGPQAAFYLGLVGAIGNVGSLLGPVLFGHL 365 Query: 362 FDNGGLAPTGWLACGMAVLSVGFFGLHAYMNR 393 FD G++P W+A G + F HA + R Sbjct: 366 FDLAGISPILWVATGACAAATVAFAGHARVVR 397 >A9U886.1 A9U886_PHYPA Predicted protein (Fragment) Length = 302 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 108/280 (38%), Positives = 169/280 (60%), Gaps = 5/280 (1%) Query: 67 SLYHKVGVNRLIVGALALTALSLFSIPAASSNWHLFIVLMGLFGLFNSLSLPAIQAFVGF 126 SL+H++G RLIVGAL L +IP S +W +++ LM G +LS PAIQAF+GF Sbjct: 24 SLFHRLGAKRLIVGALLLQGCIQLAIPF-SQSWTIYLALMIGLGFTFNLSSPAIQAFIGF 82 Query: 127 RFAEQRAELFNIIYVCNNIGVALGTSLSGFLG--NYMLSFVLNGVTSXXXXXXXXXYLRK 184 R+ EQR ELFNI+YV NN+G+A+GTSL+G + ++ L+F+LN ++ +++ Sbjct: 83 RWKEQRRELFNIVYVSNNLGMAIGTSLAGVVAAFSFQLTFLLNSASTLLFALFFFIFMKH 142 Query: 185 VGTAS-PHEQTRKKQPQPAQSGWRLMGQIRIYLFMSVGSMFLLIGNSIWNTGVSPFIISE 243 + + + + + + +L+ + ++YLFM++G+ F+ ++WNTGV+P++ Sbjct: 143 ISHKELVGDSAAQAEKRSGKETLQLLYRYQLYLFMALGAGFIFFSTTVWNTGVAPYLTGL 202 Query: 244 GWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFXXXXXXXXXXXXVFYLSGYAVILLMP-S 302 G P Y +LWT+NGI+IFA QP+ + IKR V Y +G+ +LL S Sbjct: 203 GMPLAAYSWLWTINGIIIFAGQPVTTQIKRLLKQSLSAQLVTSAVLYGTGFCFMLLFHNS 262 Query: 303 YAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGL 342 Y M++ T GEMLISP +P+FI++ APFYLG+ Sbjct: 263 YVAFIFGMIITTFGEMLISPTIPTFITEKTGETAPFYLGV 302 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.327 0.141 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,067,950,490 Number of extensions: 80173283 Number of successful extensions: 271065 Number of sequences better than 1.0e-05: 289 Number of HSP's gapped: 270323 Number of HSP's successfully gapped: 302 Length of query: 403 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 265 Effective length of database: 1,760,596,133 Effective search space: 466557975245 Effective search space used: 466557975245 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 132 (55.5 bits)