BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0064.0014.p (209 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7K6.1 B3K7K6_9BACI Uracil phosphoribosyltransferase EC=2.4.2.9 360 6e-98 B1DEI0.1 B1DEI0_9BACL Uracil phosphoribosyltransferase 328 2e-88 C3BSV6.1 C3BSV6_9BACI Uracil phosphoribosyltransferase 313 6e-84 C3BAZ0.1 C3BAZ0_BACMY Uracil phosphoribosyltransferase 313 6e-84 C3ATF0.1 C3ATF0_BACMY Uracil phosphoribosyltransferase 313 6e-84 >B3K7K6.1 B3K7K6_9BACI Uracil phosphoribosyltransferase EC=2.4.2.9 Length = 209 Score = 360 bits (923), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 177/209 (84%), Positives = 189/209 (90%) Query: 1 MGKLVICDHPLIQHKLTFIRDVRTNTKEFREHVDEVATLMAYEITRDIPLETITVQTPVA 60 MGKLVICDHPLIQHKLTFIRD+RTNTK+FRE VDEVATLMAYEITR++PLE+I+VQTPVA Sbjct: 1 MGKLVICDHPLIQHKLTFIRDMRTNTKDFRELVDEVATLMAYEITREVPLESISVQTPVA 60 Query: 61 ETQSKVISGRMLGLIPILRAGLGMLEGVLKLLPAAKVGHVGLFRDPETLQPVEYYIKLPT 120 ETQ KVISGRMLGL+PILRAGLGML+GV+KLLPAAKVGHVGLFRDPETLQPVEYY KLPT Sbjct: 61 ETQGKVISGRMLGLVPILRAGLGMLDGVVKLLPAAKVGHVGLFRDPETLQPVEYYTKLPT 120 Query: 121 DVQERELIVIDPMLATGGSAIAAITSLKNRGCTQIKMMNLIXXXXXXXXXXXXHPDVDIY 180 DV ERELIVIDPMLATGGSAIAAI LK RGCTQIKMMNL+ HPDVDIY Sbjct: 121 DVTERELIVIDPMLATGGSAIAAIDVLKKRGCTQIKMMNLVAAPEGVKAVHDAHPDVDIY 180 Query: 181 VAALDDHLNEHGYIVPGLGDAGDRLYGTK 209 VAALD+ LN+HGYIVPGLGDAGDRLYGTK Sbjct: 181 VAALDEGLNDHGYIVPGLGDAGDRLYGTK 209 >B1DEI0.1 B1DEI0_9BACL Uracil phosphoribosyltransferase Length = 209 Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/209 (76%), Positives = 178/209 (85%) Query: 1 MGKLVICDHPLIQHKLTFIRDVRTNTKEFREHVDEVATLMAYEITRDIPLETITVQTPVA 60 M K+VICDHPLIQHKLTFIR+ TNTK+FRE VDEVATLMAYEITRD+PL+TITV+TPVA Sbjct: 1 MSKVVICDHPLIQHKLTFIRNKDTNTKDFRELVDEVATLMAYEITRDVPLDTITVETPVA 60 Query: 61 ETQSKVISGRMLGLIPILRAGLGMLEGVLKLLPAAKVGHVGLFRDPETLQPVEYYIKLPT 120 T++KV+SGRMLGLIPILRAGLGM+EG+LKL+PAAKVGH+GL RD ETLQP EYYI LPT Sbjct: 61 TTEAKVVSGRMLGLIPILRAGLGMVEGMLKLIPAAKVGHIGLVRDHETLQPTEYYINLPT 120 Query: 121 DVQERELIVIDPMLATGGSAIAAITSLKNRGCTQIKMMNLIXXXXXXXXXXXXHPDVDIY 180 D R+LIVIDPMLATGGSAIAAI SLK RGC QIK+M LI HPD+DIY Sbjct: 121 DAANRQLIVIDPMLATGGSAIAAINSLKKRGCDQIKLMCLIAAPEGVKAVQDAHPDIDIY 180 Query: 181 VAALDDHLNEHGYIVPGLGDAGDRLYGTK 209 +AALDD LNE GYIVPGLGDAGDRL+GT Sbjct: 181 LAALDDALNEKGYIVPGLGDAGDRLFGTN 209 >C3BSV6.1 C3BSV6_9BACI Uracil phosphoribosyltransferase Length = 209 Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 147/209 (70%), Positives = 178/209 (85%) Query: 1 MGKLVICDHPLIQHKLTFIRDVRTNTKEFREHVDEVATLMAYEITRDIPLETITVQTPVA 60 MGKL + DHPLIQHK+T+IRD T TKEFRE VDEVA+LMA+EITRD+PLE I ++TPV+ Sbjct: 1 MGKLYVFDHPLIQHKITYIRDKNTGTKEFRELVDEVASLMAFEITRDLPLEEIEIETPVS 60 Query: 61 ETQSKVISGRMLGLIPILRAGLGMLEGVLKLLPAAKVGHVGLFRDPETLQPVEYYIKLPT 120 + ++KVI+G+ LGLIPILRAGLGM++G+LKL+PAAKVGHVGL+RDP+TLQPVEYY+KLPT Sbjct: 61 KAKTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPT 120 Query: 121 DVQERELIVIDPMLATGGSAIAAITSLKNRGCTQIKMMNLIXXXXXXXXXXXXHPDVDIY 180 DV+ER+ IV+DPMLATGGSA AI SLK RG QIK+M ++ HPDVDIY Sbjct: 121 DVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQIKLMCIVAAPEGVKVVQEEHPDVDIY 180 Query: 181 VAALDDHLNEHGYIVPGLGDAGDRLYGTK 209 VAALD+ LN+HGY+VPGLGDAGDRL+GTK Sbjct: 181 VAALDEKLNDHGYVVPGLGDAGDRLFGTK 209 >C3BAZ0.1 C3BAZ0_BACMY Uracil phosphoribosyltransferase Length = 209 Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 147/209 (70%), Positives = 178/209 (85%) Query: 1 MGKLVICDHPLIQHKLTFIRDVRTNTKEFREHVDEVATLMAYEITRDIPLETITVQTPVA 60 MGKL + DHPLIQHK+T+IRD T TKEFRE VDEVA+LMA+EITRD+PLE I ++TPV+ Sbjct: 1 MGKLYVFDHPLIQHKITYIRDKNTGTKEFRELVDEVASLMAFEITRDLPLEEIEIETPVS 60 Query: 61 ETQSKVISGRMLGLIPILRAGLGMLEGVLKLLPAAKVGHVGLFRDPETLQPVEYYIKLPT 120 + ++KVI+G+ LGLIPILRAGLGM++G+LKL+PAAKVGHVGL+RDP+TLQPVEYY+KLPT Sbjct: 61 KAKTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPT 120 Query: 121 DVQERELIVIDPMLATGGSAIAAITSLKNRGCTQIKMMNLIXXXXXXXXXXXXHPDVDIY 180 DV+ER+ IV+DPMLATGGSA AI SLK RG QIK+M ++ HPDVDIY Sbjct: 121 DVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQIKLMCIVAAPEGVKVVQEEHPDVDIY 180 Query: 181 VAALDDHLNEHGYIVPGLGDAGDRLYGTK 209 VAALD+ LN+HGY+VPGLGDAGDRL+GTK Sbjct: 181 VAALDEKLNDHGYVVPGLGDAGDRLFGTK 209 >C3ATF0.1 C3ATF0_BACMY Uracil phosphoribosyltransferase Length = 209 Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 147/209 (70%), Positives = 178/209 (85%) Query: 1 MGKLVICDHPLIQHKLTFIRDVRTNTKEFREHVDEVATLMAYEITRDIPLETITVQTPVA 60 MGKL + DHPLIQHK+T+IRD T TKEFRE VDEVA+LMA+EITRD+PLE I ++TPV+ Sbjct: 1 MGKLYVFDHPLIQHKITYIRDKNTGTKEFRELVDEVASLMAFEITRDLPLEEIEIETPVS 60 Query: 61 ETQSKVISGRMLGLIPILRAGLGMLEGVLKLLPAAKVGHVGLFRDPETLQPVEYYIKLPT 120 + ++KVI+G+ LGLIPILRAGLGM++G+LKL+PAAKVGHVGL+RDP+TLQPVEYY+KLPT Sbjct: 61 KAKTKVIAGKKLGLIPILRAGLGMVDGILKLIPAAKVGHVGLYRDPKTLQPVEYYVKLPT 120 Query: 121 DVQERELIVIDPMLATGGSAIAAITSLKNRGCTQIKMMNLIXXXXXXXXXXXXHPDVDIY 180 DV+ER+ IV+DPMLATGGSA AI SLK RG QIK+M ++ HPDVDIY Sbjct: 121 DVEERDFIVLDPMLATGGSAAEAINSLKKRGAKQIKLMCIVAAPEGVKVVQEEHPDVDIY 180 Query: 181 VAALDDHLNEHGYIVPGLGDAGDRLYGTK 209 VAALD+ LN+HGY+VPGLGDAGDRL+GTK Sbjct: 181 VAALDEKLNDHGYVVPGLGDAGDRLFGTK 209 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.141 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,159,664,619 Number of extensions: 42654493 Number of successful extensions: 115283 Number of sequences better than 1.0e-05: 1612 Number of HSP's gapped: 113911 Number of HSP's successfully gapped: 1612 Length of query: 209 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 79 Effective length of database: 1,835,964,253 Effective search space: 145041175987 Effective search space used: 145041175987 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)