BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0064.0001.p (460 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7J3.1 B3K7J3_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltran... 717 0.0 B1DEF0.1 B1DEF0_9BACL UDP-N-acetylglucosamine 1-carboxyvinyltran... 607 e-172 C0Z760.1 C0Z760_BREBN UDP-N-acetylglucosamine 1-carboxyvinyltran... 580 e-163 Q5WB82.1 MURA1_BACSK UDP-N-acetylglucosamine 1-carboxyvinyltrans... 543 e-152 C5D975.1 C5D975_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltran... 535 e-150 >B3K7J3.1 B3K7J3_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltransferase Length = 449 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/460 (78%), Positives = 387/460 (84%), Gaps = 12/460 (2%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 MSKFIVRGG RLTGSVKVSGAKNSVLPIIAASLL E G SVI+DAPPLDDV+TISKVLES Sbjct: 2 MSKFIVRGGKRLTGSVKVSGAKNSVLPIIAASLLGEVGESVIIDAPPLDDVITISKVLES 61 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 LGAG+TYQ++VI V+A +IT+ EAPYEWVRKMRASFLVMGPLL+R G TRISLPGGCAIG Sbjct: 62 LGAGITYQDEVIRVNAEHITTCEAPYEWVRKMRASFLVMGPLLARCGRTRISLPGGCAIG 121 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAA LAEG Sbjct: 122 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAATLAEG 181 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TTVIENAAKEPEIVDLANYLN IRIEGVE++HGVKH+VIPDRIEAGT+ Sbjct: 182 TTVIENAAKEPEIVDLANYLNAMGAKVRGAGTGVIRIEGVEKMHGVKHNVIPDRIEAGTF 241 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 MAAAAITGGDVYVEGAIADHLGPVI+KMEEMG+T+ PDENG+RVI+DKPLK+VD+KTLPY Sbjct: 242 MAAAAITGGDVYVEGAIADHLGPVISKMEEMGITVEPDENGIRVIADKPLKSVDVKTLPY 301 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL SEGTSVVTETVFENRFMHVDEF MNAEIK+EGRSAIVTG A Sbjct: 302 PGFPTDMQSQMMALLLVSEGTSVVTETVFENRFMHVDEFQLMNAEIKVEGRSAIVTGGAK 361 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRISME 420 L GAKV ATDLR TTEV G HIDRGYV+LAEKLSGLGADIWRIS E Sbjct: 362 LKGAKVTATDLRAGAALILAGLVSEGTTEVGGVQHIDRGYVHLAEKLSGLGADIWRISTE 421 Query: 421 ESGAAAPAVKEEVLKPETARSESFKSEEVKPRFQVQPTWV 460 E E+V K +E K F+VQPTWV Sbjct: 422 EPST------EKVSKKAATEAEDAK------HFKVQPTWV 449 >B1DEF0.1 B1DEF0_9BACL UDP-N-acetylglucosamine 1-carboxyvinyltransferase Length = 451 Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust. Identities = 310/459 (67%), Positives = 365/459 (79%), Gaps = 9/459 (1%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M+K IVRGG RL+G+V+VSGAKN+VLPI+AASLLA EG SVI D P LDDVMTI KVL S Sbjct: 1 MTKIIVRGGQRLSGTVRVSGAKNAVLPILAASLLAAEGDSVICDVPLLDDVMTIQKVLAS 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 LGA +TY N+ +++ A I+++EAPYE+VRKMRASFLVMGPLL+R+G RISLPGGCAIG Sbjct: 61 LGAKITYNNETMQISAGTISTFEAPYEFVRKMRASFLVMGPLLARIGKVRISLPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 TRPIDQHLKGFEA+GAEI+LG G+IEA + RL+GAK+YLDVASVGATENIMMAAALAEG Sbjct: 121 TRPIDQHLKGFEAMGAEITLGHGFIEASTKTRLKGAKIYLDVASVGATENIMMAAALAEG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT IENAAKEPEIVDLANYLN IRIEGV+ +HGV H+VIPDR+EAGTY Sbjct: 181 TTTIENAAKEPEIVDLANYLNAMGAKVRGAGTGEIRIEGVKCMHGVTHNVIPDRVEAGTY 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGGDV+VE AI DHL PVI+K++EMGV ++ +NG+RV + K LK+VD+KTLP+ Sbjct: 241 MIAAAITGGDVFVENAIGDHLTPVISKLQEMGVEVMESDNGIRVRAPKALKSVDVKTLPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL SEGTSVVTETVFENRFMHV+EF M+A+IK+EGRSA VTGN Sbjct: 301 PGFPTDMQSQMMALLLASEGTSVVTETVFENRFMHVEEFKKMSAQIKVEGRSAFVTGNVP 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRISME 420 LVGAKVCATDLR TEVSG +H+DRGYV++ KL+ LGADI R+ E Sbjct: 361 LVGAKVCATDLRAGAALICAGLRADGETEVSGIYHVDRGYVDITGKLAALGADIRRVEPE 420 Query: 421 ESGAAAPAVKEEVLKPETARSESFKSEEVKPRFQVQPTW 459 + AAAPAV+ E + ++K E +VQPTW Sbjct: 421 AAVAAAPAVELEPVG-------TYKREAAV--LKVQPTW 450 >C0Z760.1 C0Z760_BREBN UDP-N-acetylglucosamine 1-carboxyvinyltransferase EC=2.5.1.7 Length = 438 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 289/430 (67%), Positives = 329/430 (76%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGG L G+VKVSGAKN+VLPIIAAS+LAEE VI D P LDDV TI +L+S Sbjct: 1 MDKIIVRGGKALAGNVKVSGAKNAVLPIIAASILAEEETCVISDVPGLDDVRTICDLLKS 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 +G +TY ++V+ +DA +TS EA YE VRKMRASFLVMGPLL+R G R++LPGGCAIG Sbjct: 61 MGISLTYDHEVLTIDASKLTSVEASYELVRKMRASFLVMGPLLARKGQARVALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 TRPIDQHLKGFEA+GA+I +GQG+IEA GRL+GAK+YLD+ASVGATENIMMAAALAEG Sbjct: 121 TRPIDQHLKGFEAMGAKIEIGQGFIEATVEGRLKGAKIYLDIASVGATENIMMAAALAEG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT+IENAA+EPEIVDLAN+LN IRIEGVE++ G H VIPDRIEAGT+ Sbjct: 181 TTLIENAAEEPEIVDLANFLNRMGAKIRGAGTGSIRIEGVEKMKGCTHCVIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGGDV+VEGAI DHL V AK+ EMGV I ENG+RV P+KAVDLKTLPY Sbjct: 241 MVAAAITGGDVFVEGAICDHLKSVTAKLREMGVDIEEQENGIRVRRTGPMKAVDLKTLPY 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL SEGTS+VTETVFENRFMHV+EF MNA IKIEGRSAIV G + Sbjct: 301 PGFPTDMQSQMMALLLVSEGTSIVTETVFENRFMHVEEFRRMNANIKIEGRSAIVEGGSK 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRISME 420 L G+KV ATDLR TEVS HHIDRGYVN EKL LGAD+ R+ Sbjct: 361 LTGSKVAATDLRAGAALVLAGLVSEGETEVSALHHIDRGYVNFTEKLLALGADVERVVPA 420 Query: 421 ESGAAAPAVK 430 A + +K Sbjct: 421 REKAVSETIK 430 >Q5WB82.1 MURA1_BACSK UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 EC=2.5.1.7 Length = 432 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 269/417 (64%), Positives = 321/417 (76%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGGN+L GSVKV GAKN+VLP+IAAS+LAE G S+I + P L DV T+ +VL + Sbjct: 1 MEKIIVRGGNKLHGSVKVEGAKNAVLPVIAASILAERGASIIEEVPSLTDVYTMKEVLAN 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 L GV Y+N V A EAP+E+VRKMRASFLVMGPLL+R+G RI+LPGGCAIG Sbjct: 61 LNVGVEYENGRFAVRADRPLKTEAPFEYVRKMRASFLVMGPLLARVGRARIALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPI+QHLKGFEA+GA + +G G+IEA+ +G+L+G K+YLD SVGATENIMMAA LAEG Sbjct: 121 SRPIEQHLKGFEAMGATVEIGNGFIEARIDGKLQGTKIYLDFPSVGATENIMMAAVLAEG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT+IEN A+EPEIVDLANYLN IRI+GV+ L G H VIPDRIEAGT+ Sbjct: 181 TTIIENVAEEPEIVDLANYLNAMGAKVRGAGTGVIRIDGVDALQGAVHSVIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGG+V+VEGAIA+H+ P++AKM EMGV II +E G+RVI + LKAVD+KT+P+ Sbjct: 241 MVAAAITGGNVFVEGAIAEHMRPLVAKMREMGVDIIEEEAGLRVIGPEQLKAVDIKTMPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQ+QMMALLLR+EGTSVVTETVFENRFMHV+EF MN IKIEGRSAIV+G + Sbjct: 301 PGFPTDMQAQMMALLLRAEGTSVVTETVFENRFMHVEEFRRMNGNIKIEGRSAIVSGPTS 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRI 417 L GA+V ATDLR T V+ H+DRGYVNL EKL LGADI R+ Sbjct: 361 LQGAEVGATDLRAGAALVLAGLVADGYTRVTELKHLDRGYVNLTEKLKALGADIERV 417 >C5D975.1 C5D975_9BACI UDP-N-acetylglucosamine 1-carboxyvinyltransferase Length = 435 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 277/430 (64%), Positives = 327/430 (76%), Gaps = 1/430 (0%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGGNRL+G+VKV GAKN+VLP+IAA+LLA G SVI D P L DV TIS+VL Sbjct: 1 MEKIIVRGGNRLSGTVKVEGAKNAVLPVIAATLLASNGKSVIHDVPALSDVYTISEVLRY 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 LGA V + + I VDA +EAP+E+VRKMRAS LVMG LL+R G R++LPGGCAIG Sbjct: 61 LGADVKIEENTITVDASQELKFEAPFEYVRKMRASVLVMGSLLARNGRARVALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPIDQHLKGFEA+GA + +G G+I+A+ GRLRGAK+YLD SVGATENIMMAA LAEG Sbjct: 121 SRPIDQHLKGFEAMGAHVKVGNGFIDAEVKGRLRGAKIYLDFPSVGATENIMMAAVLAEG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT+IEN AKEPEIVDLAN+LN IRIEGV++L G H VIPDRIEAGT+ Sbjct: 181 TTIIENCAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDQLTGTTHTVIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGG+V V+GA+ +HL +IAKMEEMGVTII + NG+RVI + LKAVD+KT+PY Sbjct: 241 MVAAAITGGNVLVQGAVPEHLSSLIAKMEEMGVTIIEEGNGLRVIGPEKLKAVDIKTMPY 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL++EGTS+VTETVFENRFMHV+EF MNA+IKIEGRS I+ G Sbjct: 301 PGFPTDMQSQMMALLLKAEGTSMVTETVFENRFMHVEEFRRMNADIKIEGRSVIINGPCN 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRISME 420 L GA+V ATDLR T V+ H+DRGYV EKL+ LGADI R++ + Sbjct: 361 LQGAEVAATDLRAAAALILAGLAAEGYTRVTELRHLDRGYVRFHEKLAALGADIERVN-D 419 Query: 421 ESGAAAPAVK 430 ES AA VK Sbjct: 420 ESETAAEDVK 429 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,480,695,751 Number of extensions: 98098308 Number of successful extensions: 283909 Number of sequences better than 1.0e-05: 1927 Number of HSP's gapped: 277628 Number of HSP's successfully gapped: 1930 Length of query: 460 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 321 Effective length of database: 1,751,175,118 Effective search space: 562127212878 Effective search space used: 562127212878 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)