BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0060.0015.p (193 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K909.1 B3K909_9BACI Glutamine amidotransferase of anthranilate... 333 4e-90 B1DID5.1 B1DID5_9BACL Glutamine amidotransferase of anthranilate... 333 5e-90 B0YJD1.1 B0YJD1_PAEPO Glutamine amidotransferase 330 4e-89 A8W1V8.1 A8W1V8_9BACI Anthranilate/para-aminobenzoate synthase c... 309 1e-82 C5D395.1 C5D395_9BACI Glutamine amidotransferase of anthranilate... 296 7e-79 >B3K909.1 B3K909_9BACI Glutamine amidotransferase of anthranilate synthase Length = 193 Score = 333 bits (855), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 164/190 (86%), Positives = 170/190 (89%) Query: 1 MILVIDNYDSFTYNLVQYLGELGEEVRVSRNDEITIEEIEAFAPDHILISPGPCTPNEAG 60 MILVIDNYDSFTYNLVQYLGELGEEV+V RNDEI I IEA APDHILISPGPCTPNEAG Sbjct: 1 MILVIDNYDSFTYNLVQYLGELGEEVKVYRNDEIDIAGIEALAPDHILISPGPCTPNEAG 60 Query: 61 ISLALIQHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSPIHHNGTSVFEGLES 120 ISL +I HFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTS I H G SVFEGL Sbjct: 61 ISLDVISHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSAIQHTGESVFEGLPV 120 Query: 121 PFTATRYHSLIVERETLPDCLEITAETAEGEIMALRHKEYPIEGVQFHPESIITNHGHTM 180 PFTATRYHSLIVE+ETLP+ LEITA T EGEIM LRHK YP+EGVQFHPESIIT+HGH M Sbjct: 121 PFTATRYHSLIVEKETLPEELEITAWTEEGEIMGLRHKHYPVEGVQFHPESIITDHGHQM 180 Query: 181 LRNFLKRRAG 190 LRNFLKR AG Sbjct: 181 LRNFLKRTAG 190 >B1DID5.1 B1DID5_9BACL Glutamine amidotransferase of anthranilate synthase Length = 193 Score = 333 bits (854), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 158/190 (83%), Positives = 174/190 (91%) Query: 1 MILVIDNYDSFTYNLVQYLGELGEEVRVSRNDEITIEEIEAFAPDHILISPGPCTPNEAG 60 MILVIDNYDSFTYNLVQYLGELGEEV V RNDEI + IEA PDHILISPGPC+PNEAG Sbjct: 1 MILVIDNYDSFTYNLVQYLGELGEEVVVKRNDEIDLAGIEALKPDHILISPGPCSPNEAG 60 Query: 61 ISLALIQHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSPIHHNGTSVFEGLES 120 ISL++I+HFKGIIPIFGVCLGHQ+IGQAFGG+V+RAE+LMHGKTS I H+G ++FEG+ S Sbjct: 61 ISLSVIEHFKGIIPIFGVCLGHQSIGQAFGGDVVRAEKLMHGKTSEILHDGKTIFEGIPS 120 Query: 121 PFTATRYHSLIVERETLPDCLEITAETAEGEIMALRHKEYPIEGVQFHPESIITNHGHTM 180 P+TATRYHSLIV+RETLPDCLEI+AETAEGEIM LRHKEYPIEGVQFHPESIIT HGH M Sbjct: 121 PYTATRYHSLIVKRETLPDCLEISAETAEGEIMGLRHKEYPIEGVQFHPESIITQHGHDM 180 Query: 181 LRNFLKRRAG 190 LRNFLK R G Sbjct: 181 LRNFLKIRTG 190 >B0YJD1.1 B0YJD1_PAEPO Glutamine amidotransferase Length = 191 Score = 330 bits (846), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 159/190 (83%), Positives = 173/190 (91%) Query: 1 MILVIDNYDSFTYNLVQYLGELGEEVRVSRNDEITIEEIEAFAPDHILISPGPCTPNEAG 60 MILVIDNYDSFTYNLVQYLGELGEEV V RNDEI ++ IE AP+HILISPGPCTPNEAG Sbjct: 1 MILVIDNYDSFTYNLVQYLGELGEEVTVKRNDEIDVKGIEELAPEHILISPGPCTPNEAG 60 Query: 61 ISLALIQHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSPIHHNGTSVFEGLES 120 ISL +I HFKG IPIFGVCLGHQAIGQAFGG VIRAERLMHGKTSPI H+ TSVFEGL S Sbjct: 61 ISLDVISHFKGRIPIFGVCLGHQAIGQAFGGKVIRAERLMHGKTSPILHHNTSVFEGLPS 120 Query: 121 PFTATRYHSLIVERETLPDCLEITAETAEGEIMALRHKEYPIEGVQFHPESIITNHGHTM 180 PFTATRYHSL+VERE+LP+CLEITAETAEGEIM LRHKE+ +EGVQFHPESIIT++GH + Sbjct: 121 PFTATRYHSLLVERESLPECLEITAETAEGEIMGLRHKEFAVEGVQFHPESIITDYGHQL 180 Query: 181 LRNFLKRRAG 190 LRNFLKR+ G Sbjct: 181 LRNFLKRKVG 190 >A8W1V8.1 A8W1V8_9BACI Anthranilate/para-aminobenzoate synthase component II-like protein Length = 198 Score = 309 bits (791), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 140/192 (72%), Positives = 172/192 (89%), Gaps = 1/192 (0%) Query: 1 MILVIDNYDSFTYNLVQYLGELGEEVRVSRNDEITIEEIEAFAPDHILISPGPCTPNEAG 60 MI++IDNYDSFTYNLVQYLGE+GEE+ V RND++T+EEIE APD ++ISPGPC+P+EAG Sbjct: 1 MIVMIDNYDSFTYNLVQYLGEMGEELVVKRNDQVTLEEIEDLAPDFLMISPGPCSPDEAG 60 Query: 61 ISLALIQHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSPIHHNGTSVFEGLES 120 IS+ +I+HF G IP+FGVCLGHQ++ Q FGG+V++AERLMHGKTSP+ H+G ++F+GLES Sbjct: 61 ISMDVIRHFAGKIPVFGVCLGHQSLAQVFGGDVVQAERLMHGKTSPVLHDGKTIFQGLES 120 Query: 121 PFTATRYHSLIVERETLPDCLEITAETAEGEIMALRHKEYPIEGVQFHPESIITNHGHTM 180 PFTATRYHSLIV+RETLPDCLEI+AETAEGEIMALRHKE+ +EGVQFHPESI+T+ G + Sbjct: 121 PFTATRYHSLIVKRETLPDCLEISAETAEGEIMALRHKEFAVEGVQFHPESIMTDTGKQL 180 Query: 181 LRNFLK-RRAGE 191 LRNFL R GE Sbjct: 181 LRNFLDVHRQGE 192 >C5D395.1 C5D395_9BACI Glutamine amidotransferase of anthranilate synthase Length = 192 Score = 296 bits (758), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 136/186 (73%), Positives = 160/186 (86%) Query: 1 MILVIDNYDSFTYNLVQYLGELGEEVRVSRNDEITIEEIEAFAPDHILISPGPCTPNEAG 60 MIL++DNYDSFTYNLVQYLG LGEE+ V RNDEITI+EIE +PD ++ISPGPCTPNEAG Sbjct: 1 MILMVDNYDSFTYNLVQYLGVLGEELIVKRNDEITIKEIETLSPDFLMISPGPCTPNEAG 60 Query: 61 ISLALIQHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSPIHHNGTSVFEGLES 120 IS+ I++F G IPIFGVCLGHQAI Q FGG VIRA+RLMHGKTSPI H+GT++F + S Sbjct: 61 ISMEAIEYFAGKIPIFGVCLGHQAIAQVFGGKVIRADRLMHGKTSPIFHDGTTIFANIPS 120 Query: 121 PFTATRYHSLIVERETLPDCLEITAETAEGEIMALRHKEYPIEGVQFHPESIITNHGHTM 180 PFTATRYHSLIVE+ETLPDC EI+A T E EIMA+RHK P+EGVQFHPESI+T+HG + Sbjct: 121 PFTATRYHSLIVEKETLPDCFEISAWTEENEIMAIRHKTLPVEGVQFHPESIMTSHGMKL 180 Query: 181 LRNFLK 186 L NF++ Sbjct: 181 LENFIQ 186 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,181,049,411 Number of extensions: 47025708 Number of successful extensions: 184108 Number of sequences better than 1.0e-05: 5181 Number of HSP's gapped: 178308 Number of HSP's successfully gapped: 5182 Length of query: 193 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 65 Effective length of database: 1,854,806,283 Effective search space: 120562408395 Effective search space used: 120562408395 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)